EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019456 (Gene tree)
Gene ID: 103378587
Gene Symbol: -
Alias: -
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 20910 bases
Position: chr5:75000-95909
Accession: 103378587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030385	DUF1604	PF07713.13	1.3e-35	1	1
ENSCSEP00000030395	DUF1604	PF07713.13	1.1e-33	1	1
ENSCSEP00000030385	G-patch	PF01585.23	6.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030791	-	3949	XM_008309855	ENSCSEP00000030385	761 (aa)	XP_008308077	-
ENSCSET00000030800	-	390	-	ENSCSEP00000030395	129 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000019456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019456's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019456	-	91	64.103	ENSG00000076650	GPATCH1	91	64.103	Homo_sapiens
ENSCSEG00000019456	-	75	80.412	ENSAPOG00000009586	-	81	80.412	Acanthochromis_polyacanthus
ENSCSEG00000019456	-	84	62.385	ENSAMEG00000015575	GPATCH1	81	48.755	Ailuropoda_melanoleuca
ENSCSEG00000019456	-	91	77.778	ENSACIG00000001397	-	90	77.778	Amphilophus_citrinellus
ENSCSEG00000019456	-	60	74.026	ENSAOCG00000009040	-	81	74.026	Amphiprion_ocellaris
ENSCSEG00000019456	-	82	75.556	ENSAOCG00000006668	gpatch1	85	64.719	Amphiprion_ocellaris
ENSCSEG00000019456	-	75	82.474	ENSAPEG00000000026	gpatch1	86	64.719	Amphiprion_percula
ENSCSEG00000019456	-	88	74.336	ENSATEG00000014494	gpatch1	83	66.594	Anabas_testudineus
ENSCSEG00000019456	-	61	75.949	ENSAPLG00000007584	GPATCH1	96	38.908	Anas_platyrhynchos
ENSCSEG00000019456	-	84	63.303	ENSANAG00000027002	GPATCH1	78	51.327	Aotus_nancymaae
ENSCSEG00000019456	-	98	63.504	ENSACLG00000024740	gpatch1	79	63.878	Astatotilapia_calliptera
ENSCSEG00000019456	-	75	83.505	ENSAMXG00000020177	gpatch1	83	56.332	Astyanax_mexicanus
ENSCSEG00000019456	-	84	62.385	ENSBTAG00000000721	GPATCH1	81	49.170	Bos_taurus
ENSCSEG00000019456	-	56	58.333	WBGene00011109	R07E5.1	50	45.882	Caenorhabditis_elegans
ENSCSEG00000019456	-	84	63.303	ENSCJAG00000000684	GPATCH1	78	51.327	Callithrix_jacchus
ENSCSEG00000019456	-	84	62.385	ENSCAFG00000007457	GPATCH1	66	51.214	Canis_familiaris
ENSCSEG00000019456	-	84	62.385	ENSCAFG00020019731	GPATCH1	78	51.214	Canis_lupus_dingo
ENSCSEG00000019456	-	84	62.385	ENSCHIG00000019626	GPATCH1	83	49.378	Capra_hircus
ENSCSEG00000019456	-	63	64.198	ENSCAPG00000008827	GPATCH1	81	45.934	Cavia_aperea
ENSCSEG00000019456	-	85	62.727	ENSCPOG00000024477	GPATCH1	81	49.689	Cavia_porcellus
ENSCSEG00000019456	-	84	63.303	ENSCCAG00000024676	GPATCH1	78	51.106	Cebus_capucinus
ENSCSEG00000019456	-	91	64.957	ENSCATG00000043637	GPATCH1	91	64.957	Cercocebus_atys
ENSCSEG00000019456	-	79	48.238	ENSCLAG00000003395	-	86	48.238	Chinchilla_lanigera
ENSCSEG00000019456	-	84	63.303	ENSCSAG00000004743	GPATCH1	78	49.779	Chlorocebus_sabaeus
ENSCSEG00000019456	-	76	53.953	ENSCHOG00000012865	GPATCH1	70	53.953	Choloepus_hoffmanni
ENSCSEG00000019456	-	57	75.342	ENSCPBG00000000666	GPATCH1	89	47.929	Chrysemys_picta_bellii
ENSCSEG00000019456	-	89	51.304	ENSCING00000012518	-	88	36.784	Ciona_intestinalis
ENSCSEG00000019456	-	95	39.898	ENSCANG00000012540	GPATCH1	88	38.889	Colobus_angolensis_palliatus
ENSCSEG00000019456	-	86	51.069	ENSCGRG00001016736	Gpatch1	80	51.069	Cricetulus_griseus_chok1gshd
ENSCSEG00000019456	-	93	34.053	ENSCGRG00000005069	Gpatch1	92	34.207	Cricetulus_griseus_crigri
ENSCSEG00000019456	-	75	81.443	ENSDARG00000033418	gpatch1	85	52.590	Danio_rerio
ENSCSEG00000019456	-	85	60.909	ENSDNOG00000005291	GPATCH1	84	51.322	Dasypus_novemcinctus
ENSCSEG00000019456	-	81	63.810	ENSDORG00000012546	Gpatch1	89	43.811	Dipodomys_ordii
ENSCSEG00000019456	-	84	61.468	ENSETEG00000003626	GPATCH1	61	55.556	Echinops_telfairi
ENSCSEG00000019456	-	99	31.991	ENSEBUG00000011286	gpatch1	72	36.006	Eptatretus_burgeri
ENSCSEG00000019456	-	84	62.385	ENSEASG00005021162	GPATCH1	80	51.214	Equus_asinus_asinus
ENSCSEG00000019456	-	84	62.385	ENSECAG00000022743	GPATCH1	76	51.435	Equus_caballus
ENSCSEG00000019456	-	84	60.550	ENSEEUG00000012925	GPATCH1	60	47.716	Erinaceus_europaeus
ENSCSEG00000019456	-	77	82.828	ENSELUG00000018195	gpatch1	89	56.236	Esox_lucius
ENSCSEG00000019456	-	84	61.468	ENSFCAG00000014917	GPATCH1	78	50.773	Felis_catus
ENSCSEG00000019456	-	76	71.429	ENSFALG00000007821	GPATCH1	85	49.443	Ficedula_albicollis
ENSCSEG00000019456	-	90	48.571	ENSFDAG00000003871	GPATCH1	81	48.571	Fukomys_damarensis
ENSCSEG00000019456	-	91	72.650	ENSFHEG00000007459	-	99	72.650	Fundulus_heteroclitus
ENSCSEG00000019456	-	60	80.519	ENSGMOG00000003830	gpatch1	80	48.571	Gadus_morhua
ENSCSEG00000019456	-	77	69.307	ENSGALG00000004839	GPATCH1	93	40.893	Gallus_gallus
ENSCSEG00000019456	-	76	81.633	ENSGAFG00000006163	-	86	81.633	Gambusia_affinis
ENSCSEG00000019456	-	75	86.598	ENSGACG00000017544	gpatch1	94	47.141	Gasterosteus_aculeatus
ENSCSEG00000019456	-	76	69.388	ENSGAGG00000010067	GPATCH1	89	39.812	Gopherus_agassizii
ENSCSEG00000019456	-	88	51.174	ENSGGOG00000010862	GPATCH1	77	51.174	Gorilla_gorilla
ENSCSEG00000019456	-	98	64.234	ENSHBUG00000023462	gpatch1	91	64.082	Haplochromis_burtoni
ENSCSEG00000019456	-	84	61.468	ENSHGLG00000009334	GPATCH1	78	49.889	Heterocephalus_glaber_female
ENSCSEG00000019456	-	84	61.468	ENSHGLG00100018074	GPATCH1	78	49.889	Heterocephalus_glaber_male
ENSCSEG00000019456	-	86	67.241	ENSHCOG00000006876	-	90	67.241	Hippocampus_comes
ENSCSEG00000019456	-	84	76.147	ENSIPUG00000014977	gpatch1	80	56.957	Ictalurus_punctatus
ENSCSEG00000019456	-	84	60.550	ENSSTOG00000003720	GPATCH1	82	48.560	Ictidomys_tridecemlineatus
ENSCSEG00000019456	-	84	63.303	ENSJJAG00000023765	Gpatch1	82	49.689	Jaculus_jaculus
ENSCSEG00000019456	-	88	75.221	ENSKMAG00000017950	gpatch1	90	48.894	Kryptolebias_marmoratus
ENSCSEG00000019456	-	88	75.221	ENSLBEG00000026527	gpatch1	80	63.499	Labrus_bergylta
ENSCSEG00000019456	-	53	75.000	ENSLBEG00000028648	-	69	75.000	Labrus_bergylta
ENSCSEG00000019456	-	90	50.939	ENSLACG00000008130	GPATCH1	94	39.653	Latimeria_chalumnae
ENSCSEG00000019456	-	76	70.408	ENSLOCG00000001800	gpatch1	90	42.756	Lepisosteus_oculatus
ENSCSEG00000019456	-	84	63.303	ENSLAFG00000013589	GPATCH1	82	51.656	Loxodonta_africana
ENSCSEG00000019456	-	91	64.957	ENSMFAG00000034418	GPATCH1	91	64.957	Macaca_fascicularis
ENSCSEG00000019456	-	91	65.812	ENSMMUG00000011790	GPATCH1	91	65.812	Macaca_mulatta
ENSCSEG00000019456	-	90	63.793	ENSMNEG00000045084	GPATCH1	91	63.793	Macaca_nemestrina
ENSCSEG00000019456	-	91	38.717	ENSMLEG00000043840	GPATCH1	76	38.717	Mandrillus_leucophaeus
ENSCSEG00000019456	-	98	63.504	ENSMZEG00005001926	gpatch1	80	63.673	Maylandia_zebra
ENSCSEG00000019456	-	76	71.429	ENSMGAG00000005775	GPATCH1	89	40.544	Meleagris_gallopavo
ENSCSEG00000019456	-	89	44.695	ENSMICG00000004829	GPATCH1	80	44.695	Microcebus_murinus
ENSCSEG00000019456	-	84	63.303	ENSMOCG00000000174	Gpatch1	81	50.552	Microtus_ochrogaster
ENSCSEG00000019456	-	98	67.883	ENSMMOG00000002140	gpatch1	78	67.114	Mola_mola
ENSCSEG00000019456	-	84	60.550	ENSMODG00000012226	GPATCH1	91	40.233	Monodelphis_domestica
ENSCSEG00000019456	-	88	75.221	ENSMALG00000014386	gpatch1	85	64.882	Monopterus_albus
ENSCSEG00000019456	-	84	62.385	ENSMUSG00000063808	Gpatch1	98	69.792	Mus_musculus
ENSCSEG00000019456	-	84	62.385	MGP_PahariEiJ_G0012816	Gpatch1	98	69.792	Mus_pahari
ENSCSEG00000019456	-	84	62.385	MGP_SPRETEiJ_G0030681	Gpatch1	98	69.792	Mus_spretus
ENSCSEG00000019456	-	84	62.385	ENSMPUG00000007658	GPATCH1	78	51.214	Mustela_putorius_furo
ENSCSEG00000019456	-	84	61.468	ENSMLUG00000012161	GPATCH1	81	48.548	Myotis_lucifugus
ENSCSEG00000019456	-	84	62.385	ENSNGAG00000012455	Gpatch1	78	51.327	Nannospalax_galili
ENSCSEG00000019456	-	85	80.000	ENSNBRG00000003140	-	87	80.000	Neolamprologus_brichardi
ENSCSEG00000019456	-	91	64.103	ENSNLEG00000007659	GPATCH1	91	64.103	Nomascus_leucogenys
ENSCSEG00000019456	-	67	50.993	ENSMEUG00000015174	GPATCH1	58	49.669	Notamacropus_eugenii
ENSCSEG00000019456	-	85	62.727	ENSODEG00000007103	GPATCH1	84	49.275	Octodon_degus
ENSCSEG00000019456	-	98	64.234	ENSONIG00000003302	gpatch1	87	63.911	Oreochromis_niloticus
ENSCSEG00000019456	-	97	52.212	ENSOANG00000012732	GPATCH1	74	52.212	Ornithorhynchus_anatinus
ENSCSEG00000019456	-	82	64.151	ENSOCUG00000015905	GPATCH1	81	49.791	Oryctolagus_cuniculus
ENSCSEG00000019456	-	75	85.567	ENSORLG00000018706	gpatch1	80	62.309	Oryzias_latipes
ENSCSEG00000019456	-	75	83.505	ENSORLG00020014884	-	92	66.667	Oryzias_latipes_hni
ENSCSEG00000019456	-	75	83.505	ENSORLG00015012287	-	95	67.025	Oryzias_latipes_hsok
ENSCSEG00000019456	-	98	64.964	ENSOMEG00000022688	gpatch1	85	61.505	Oryzias_melastigma
ENSCSEG00000019456	-	84	60.550	ENSOGAG00000004016	GPATCH1	82	51.893	Otolemur_garnettii
ENSCSEG00000019456	-	80	64.078	ENSOARG00000004365	GPATCH1	81	49.370	Ovis_aries
ENSCSEG00000019456	-	91	63.559	ENSPPAG00000020990	GPATCH1	91	63.559	Pan_paniscus
ENSCSEG00000019456	-	84	61.468	ENSPPRG00000017245	GPATCH1	78	50.773	Panthera_pardus
ENSCSEG00000019456	-	84	61.468	ENSPTIG00000019649	GPATCH1	78	50.773	Panthera_tigris_altaica
ENSCSEG00000019456	-	91	64.103	ENSPTRG00000010803	GPATCH1	91	64.103	Pan_troglodytes
ENSCSEG00000019456	-	91	64.957	ENSPANG00000012374	GPATCH1	91	64.957	Papio_anubis
ENSCSEG00000019456	-	69	79.775	ENSPKIG00000020745	gpatch1	68	54.362	Paramormyrops_kingsleyae
ENSCSEG00000019456	-	76	70.408	ENSPSIG00000013433	GPATCH1	89	40.898	Pelodiscus_sinensis
ENSCSEG00000019456	-	75	81.443	ENSPMGG00000014320	-	71	83.158	Periophthalmus_magnuspinnatus
ENSCSEG00000019456	-	84	63.303	ENSPEMG00000000636	Gpatch1	80	50.557	Peromyscus_maniculatus_bairdii
ENSCSEG00000019456	-	84	60.550	ENSPCIG00000021003	GPATCH1	94	40.654	Phascolarctos_cinereus
ENSCSEG00000019456	-	75	81.443	ENSPLAG00000017953	-	100	81.443	Poecilia_latipinna
ENSCSEG00000019456	-	75	80.412	ENSPMEG00000017559	-	100	80.412	Poecilia_mexicana
ENSCSEG00000019456	-	82	75.000	ENSPREG00000008264	gpatch1	88	55.269	Poecilia_reticulata
ENSCSEG00000019456	-	84	62.385	ENSPPYG00000009824	GPATCH1	78	49.107	Pongo_abelii
ENSCSEG00000019456	-	81	41.714	ENSPCAG00000005931	GPATCH1	73	41.551	Procavia_capensis
ENSCSEG00000019456	-	82	63.208	ENSPCOG00000009674	GPATCH1	82	51.230	Propithecus_coquereli
ENSCSEG00000019456	-	84	63.303	ENSPVAG00000017767	GPATCH1	63	53.333	Pteropus_vampyrus
ENSCSEG00000019456	-	98	64.234	ENSPNYG00000018189	gpatch1	89	64.082	Pundamilia_nyererei
ENSCSEG00000019456	-	75	77.320	ENSPNAG00000013187	gpatch1	78	54.667	Pygocentrus_nattereri
ENSCSEG00000019456	-	84	61.468	ENSRNOG00000011584	Gpatch1	80	50.557	Rattus_norvegicus
ENSCSEG00000019456	-	90	41.593	ENSRBIG00000034723	GPATCH1	79	41.593	Rhinopithecus_bieti
ENSCSEG00000019456	-	91	64.103	ENSRROG00000024428	GPATCH1	91	64.103	Rhinopithecus_roxellana
ENSCSEG00000019456	-	84	63.303	ENSSBOG00000034650	GPATCH1	78	51.106	Saimiri_boliviensis_boliviensis
ENSCSEG00000019456	-	84	60.550	ENSSHAG00000016016	GPATCH1	80	49.227	Sarcophilus_harrisii
ENSCSEG00000019456	-	95	64.341	ENSSFOG00015011535	gpatch1	89	52.200	Scleropages_formosus
ENSCSEG00000019456	-	88	72.566	ENSSMAG00000002883	gpatch1	89	63.441	Scophthalmus_maximus
ENSCSEG00000019456	-	88	73.451	ENSSDUG00000007444	gpatch1	81	63.871	Seriola_dumerili
ENSCSEG00000019456	-	88	73.451	ENSSLDG00000002856	gpatch1	78	64.731	Seriola_lalandi_dorsalis
ENSCSEG00000019456	-	84	62.385	ENSSARG00000004108	GPATCH1	63	64.286	Sorex_araneus
ENSCSEG00000019456	-	76	68.367	ENSSPUG00000013348	-	96	58.893	Sphenodon_punctatus
ENSCSEG00000019456	-	91	77.778	ENSSPAG00000022432	-	98	77.778	Stegastes_partitus
ENSCSEG00000019456	-	84	63.303	ENSSSCG00000002865	GPATCH1	80	51.441	Sus_scrofa
ENSCSEG00000019456	-	76	70.408	ENSTGUG00000009401	GPATCH1	91	40.166	Taeniopygia_guttata
ENSCSEG00000019456	-	98	64.234	ENSTRUG00000025081	gpatch1	89	50.542	Takifugu_rubripes
ENSCSEG00000019456	-	98	64.234	ENSTRUG00000005785	-	89	50.542	Takifugu_rubripes
ENSCSEG00000019456	-	88	71.304	ENSTNIG00000002554	gpatch1	87	60.870	Tetraodon_nigroviridis
ENSCSEG00000019456	-	54	75.714	ENSTBEG00000007750	-	61	50.877	Tupaia_belangeri
ENSCSEG00000019456	-	80	63.107	ENSTTRG00000012221	GPATCH1	69	60.714	Tursiops_truncatus
ENSCSEG00000019456	-	98	55.072	ENSUAMG00000015638	-	99	55.072	Ursus_americanus
ENSCSEG00000019456	-	84	62.385	ENSUMAG00000014645	GPATCH1	82	66.667	Ursus_maritimus
ENSCSEG00000019456	-	84	62.385	ENSVPAG00000010313	GPATCH1	74	59.649	Vicugna_pacos
ENSCSEG00000019456	-	84	62.385	ENSVVUG00000016572	GPATCH1	78	51.435	Vulpes_vulpes
ENSCSEG00000019456	-	93	39.520	ENSXETG00000018276	gpatch1	96	37.200	Xenopus_tropicalis
ENSCSEG00000019456	-	76	82.653	ENSXCOG00000009851	-	70	82.653	Xiphophorus_couchianus
ENSCSEG00000019456	-	76	82.653	ENSXMAG00000018182	-	72	82.653	Xiphophorus_maculatus