EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019533 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 1190 bases
Position: chr2:8191466-8192655
Accession: 103396656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030500	Mitoc_L55	PF09776.9	2.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030905	-	420	XM_008334834	ENSCSEP00000030500	139 (aa)	XP_008333056	-

Gene Model

Click here to download ENSCSEG00000019533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019533	zgc:171480	97	52.778	ENSAPOG00000002881	zgc:171480	72	63.462	Acanthochromis_polyacanthus
ENSCSEG00000019533	zgc:171480	98	55.797	ENSACIG00000001646	zgc:171480	98	55.797	Amphilophus_citrinellus
ENSCSEG00000019533	zgc:171480	97	56.250	ENSAOCG00000016155	zgc:171480	100	56.250	Amphiprion_ocellaris
ENSCSEG00000019533	zgc:171480	97	56.250	ENSAPEG00000022327	zgc:171480	100	56.250	Amphiprion_percula
ENSCSEG00000019533	zgc:171480	99	54.422	ENSATEG00000005625	zgc:171480	100	54.422	Anabas_testudineus
ENSCSEG00000019533	zgc:171480	72	59.406	ENSACAG00000006897	-	80	57.426	Anolis_carolinensis
ENSCSEG00000019533	zgc:171480	98	52.817	ENSACLG00000005172	zgc:171480	99	52.817	Astatotilapia_calliptera
ENSCSEG00000019533	zgc:171480	82	59.483	ENSAMXG00000043839	zgc:171480	89	59.483	Astyanax_mexicanus
ENSCSEG00000019533	zgc:171480	88	50.000	ENSCPBG00000001771	-	95	48.361	Chrysemys_picta_bellii
ENSCSEG00000019533	zgc:171480	83	54.701	ENSDARG00000043402	zgc:171480	88	54.701	Danio_rerio
ENSCSEG00000019533	zgc:171480	82	56.410	ENSELUG00000007716	zgc:171480	89	55.556	Esox_lucius
ENSCSEG00000019533	zgc:171480	65	42.857	ENSFALG00000001083	-	94	41.758	Ficedula_albicollis
ENSCSEG00000019533	zgc:171480	77	55.140	ENSFHEG00000000203	zgc:171480	90	50.400	Fundulus_heteroclitus
ENSCSEG00000019533	zgc:171480	72	67.000	ENSGMOG00000019009	zgc:171480	98	67.000	Gadus_morhua
ENSCSEG00000019533	zgc:171480	76	48.571	ENSGALG00000038820	-	92	48.571	Gallus_gallus
ENSCSEG00000019533	zgc:171480	95	50.365	ENSGAFG00000004832	-	92	50.365	Gambusia_affinis
ENSCSEG00000019533	zgc:171480	66	68.478	ENSGACG00000002136	zgc:171480	100	68.478	Gasterosteus_aculeatus
ENSCSEG00000019533	zgc:171480	79	53.571	ENSGAGG00000001806	-	86	51.818	Gopherus_agassizii
ENSCSEG00000019533	zgc:171480	98	52.817	ENSHBUG00000007895	zgc:171480	99	52.817	Haplochromis_burtoni
ENSCSEG00000019533	zgc:171480	81	61.207	ENSHCOG00000003526	zgc:171480	64	61.207	Hippocampus_comes
ENSCSEG00000019533	zgc:171480	82	55.556	ENSIPUG00000001273	mrpl55	89	54.701	Ictalurus_punctatus
ENSCSEG00000019533	zgc:171480	74	57.282	ENSKMAG00000002011	zgc:171480	81	57.282	Kryptolebias_marmoratus
ENSCSEG00000019533	zgc:171480	80	60.714	ENSLBEG00000016107	-	89	60.714	Labrus_bergylta
ENSCSEG00000019533	zgc:171480	80	60.714	ENSLBEG00000010915	zgc:171480	89	60.714	Labrus_bergylta
ENSCSEG00000019533	zgc:171480	74	57.692	ENSLACG00000016281	zgc:171480	79	55.769	Latimeria_chalumnae
ENSCSEG00000019533	zgc:171480	99	52.740	ENSMAMG00000022250	zgc:171480	99	52.740	Mastacembelus_armatus
ENSCSEG00000019533	zgc:171480	98	52.817	ENSMZEG00005015585	zgc:171480	99	52.817	Maylandia_zebra
ENSCSEG00000019533	zgc:171480	82	47.414	ENSMGAG00000002612	-	96	47.368	Meleagris_gallopavo
ENSCSEG00000019533	zgc:171480	74	49.515	ENSMMOG00000008740	-	78	48.544	Mola_mola
ENSCSEG00000019533	zgc:171480	91	57.031	ENSMALG00000019823	zgc:171480	100	57.031	Monopterus_albus
ENSCSEG00000019533	zgc:171480	98	52.113	ENSNBRG00000019447	zgc:171480	99	52.113	Neolamprologus_brichardi
ENSCSEG00000019533	zgc:171480	97	52.482	ENSONIG00000007645	zgc:171480	100	52.482	Oreochromis_niloticus
ENSCSEG00000019533	zgc:171480	76	55.238	ENSORLG00020006963	zgc:171480	78	55.238	Oryzias_latipes_hni
ENSCSEG00000019533	zgc:171480	94	50.000	ENSORLG00015003266	zgc:171480	94	50.000	Oryzias_latipes_hsok
ENSCSEG00000019533	zgc:171480	81	58.036	ENSOMEG00000008184	zgc:171480	81	58.036	Oryzias_melastigma
ENSCSEG00000019533	zgc:171480	76	53.271	ENSPKIG00000006753	zgc:171480	83	52.336	Paramormyrops_kingsleyae
ENSCSEG00000019533	zgc:171480	79	52.679	ENSPSIG00000010893	-	80	54.000	Pelodiscus_sinensis
ENSCSEG00000019533	zgc:171480	75	57.143	ENSPMGG00000012657	-	81	57.143	Periophthalmus_magnuspinnatus
ENSCSEG00000019533	zgc:171480	67	43.158	ENSPMAG00000000867	zgc:171480	92	38.889	Petromyzon_marinus
ENSCSEG00000019533	zgc:171480	93	43.511	ENSPCIG00000021848	-	94	41.538	Phascolarctos_cinereus
ENSCSEG00000019533	zgc:171480	99	48.201	ENSPFOG00000012703	zgc:171480	99	48.201	Poecilia_formosa
ENSCSEG00000019533	zgc:171480	99	49.640	ENSPREG00000020328	zgc:171480	99	49.640	Poecilia_reticulata
ENSCSEG00000019533	zgc:171480	86	59.016	ENSPNAG00000017309	zgc:171480	91	57.377	Pygocentrus_nattereri
ENSCSEG00000019533	zgc:171480	76	59.434	ENSSFOG00015015668	mrpl55	81	58.491	Scleropages_formosus
ENSCSEG00000019533	zgc:171480	99	54.676	ENSSMAG00000005429	zgc:171480	99	54.676	Scophthalmus_maximus
ENSCSEG00000019533	zgc:171480	99	59.859	ENSSDUG00000022556	zgc:171480	97	59.859	Seriola_dumerili
ENSCSEG00000019533	zgc:171480	99	60.993	ENSSLDG00000019598	zgc:171480	97	60.563	Seriola_lalandi_dorsalis
ENSCSEG00000019533	zgc:171480	79	53.636	ENSSPUG00000000735	-	86	53.636	Sphenodon_punctatus
ENSCSEG00000019533	zgc:171480	97	54.610	ENSSPAG00000011598	zgc:171480	100	54.610	Stegastes_partitus
ENSCSEG00000019533	zgc:171480	71	57.576	ENSTRUG00000003082	zgc:171480	70	57.576	Takifugu_rubripes
ENSCSEG00000019533	zgc:171480	67	56.989	ENSXCOG00000005887	zgc:171480	76	56.989	Xiphophorus_couchianus
ENSCSEG00000019533	zgc:171480	90	49.231	ENSXMAG00000007937	zgc:171480	99	47.887	Xiphophorus_maculatus