EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019549 (Gene tree)
Gene ID: 103395508
Gene Symbol: scaf4a
Alias: fa96d07|si:dkey-50p8.3|wu:fa96d07
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 10879 bases
Position: chr19:14617037-14627915
Accession: 103395508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030519	RRM_1	PF00076.22	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000030924	-	6736	XM_008333239	ENSCSEP00000030519	1132 (aa)	XP_008331461	UPI00049577B2

Gene Model

Click here to download ENSCSEG00000019549's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019549's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019549	scaf4a	53	54.697	ENSG00000156304	SCAF4	79	53.587	Homo_sapiens
ENSCSEG00000019549	scaf4a	99	70.218	ENSAPOG00000002946	scaf4a	100	72.140	Acanthochromis_polyacanthus
ENSCSEG00000019549	scaf4a	60	55.517	ENSAPOG00000019615	scaf4b	72	53.078	Acanthochromis_polyacanthus
ENSCSEG00000019549	scaf4a	99	70.629	ENSAOCG00000000615	scaf4a	100	73.427	Amphiprion_ocellaris
ENSCSEG00000019549	scaf4a	60	55.172	ENSAOCG00000010433	scaf4b	71	53.601	Amphiprion_ocellaris
ENSCSEG00000019549	scaf4a	99	70.979	ENSAPEG00000021229	scaf4a	100	72.902	Amphiprion_percula
ENSCSEG00000019549	scaf4a	60	55.172	ENSAPEG00000010913	scaf4b	71	53.601	Amphiprion_percula
ENSCSEG00000019549	scaf4a	57	53.125	ENSAPLG00000002509	SCAF4	86	49.144	Anas_platyrhynchos
ENSCSEG00000019549	scaf4a	87	49.242	ENSAMXG00000008585	scaf4a	99	49.584	Astyanax_mexicanus
ENSCSEG00000019549	scaf4a	53	55.303	ENSCJAG00000008993	SCAF4	89	57.255	Callithrix_jacchus
ENSCSEG00000019549	scaf4a	52	54.884	ENSCAFG00000008863	SCAF4	79	51.832	Canis_familiaris
ENSCSEG00000019549	scaf4a	52	56.426	ENSCAFG00020026019	SCAF4	79	50.627	Canis_lupus_dingo
ENSCSEG00000019549	scaf4a	52	55.243	ENSTSYG00000011344	SCAF4	84	53.129	Carlito_syrichta
ENSCSEG00000019549	scaf4a	53	55.000	ENSCCAG00000033727	SCAF4	79	52.335	Cebus_capucinus
ENSCSEG00000019549	scaf4a	53	55.556	ENSCATG00000030379	SCAF4	79	52.710	Cercocebus_atys
ENSCSEG00000019549	scaf4a	53	55.387	ENSCSAG00000009438	SCAF4	79	52.492	Chlorocebus_sabaeus
ENSCSEG00000019549	scaf4a	53	55.235	ENSCANG00000029847	SCAF4	79	52.492	Colobus_angolensis_palliatus
ENSCSEG00000019549	scaf4a	83	53.830	ENSDARG00000077093	scaf4a	98	52.051	Danio_rerio
ENSCSEG00000019549	scaf4a	53	54.726	ENSEASG00005007756	SCAF4	79	52.183	Equus_asinus_asinus
ENSCSEG00000019549	scaf4a	77	77.604	ENSELUG00000009909	scaf4a	91	78.307	Esox_lucius
ENSCSEG00000019549	scaf4a	53	53.858	ENSFCAG00000002228	SCAF4	80	51.589	Felis_catus
ENSCSEG00000019549	scaf4a	62	50.915	ENSFHEG00000007634	scaf4b	60	75.177	Fundulus_heteroclitus
ENSCSEG00000019549	scaf4a	66	67.305	ENSFHEG00000017866	scaf4a	95	68.278	Fundulus_heteroclitus
ENSCSEG00000019549	scaf4a	57	54.252	ENSGALG00000033965	SCAF4	86	49.602	Gallus_gallus
ENSCSEG00000019549	scaf4a	64	71.371	ENSGAFG00000019460	scaf4a	94	66.235	Gambusia_affinis
ENSCSEG00000019549	scaf4a	79	59.940	ENSGACG00000020580	scaf4a	96	60.282	Gasterosteus_aculeatus
ENSCSEG00000019549	scaf4a	60	51.475	ENSGGOG00000015557	SCAF4	76	54.449	Gorilla_gorilla
ENSCSEG00000019549	scaf4a	99	69.139	ENSHBUG00000007920	scaf4a	100	69.565	Haplochromis_burtoni
ENSCSEG00000019549	scaf4a	56	82.667	ENSHCOG00000006849	scaf4a	58	88.889	Hippocampus_comes
ENSCSEG00000019549	scaf4a	74	52.511	ENSIPUG00000011285	scaf4	95	55.072	Ictalurus_punctatus
ENSCSEG00000019549	scaf4a	65	49.405	ENSKMAG00000005742	scaf4b	72	51.471	Kryptolebias_marmoratus
ENSCSEG00000019549	scaf4a	98	69.080	ENSLBEG00000014675	scaf4a	100	70.625	Labrus_bergylta
ENSCSEG00000019549	scaf4a	84	48.907	ENSLACG00000013913	SCAF4	100	42.224	Latimeria_chalumnae
ENSCSEG00000019549	scaf4a	52	46.992	ENSLOCG00000009162	scaf4a	99	48.865	Lepisosteus_oculatus
ENSCSEG00000019549	scaf4a	59	54.321	ENSLAFG00000000022	SCAF8	56	54.582	Loxodonta_africana
ENSCSEG00000019549	scaf4a	53	55.556	ENSMFAG00000037668	SCAF4	78	53.173	Macaca_fascicularis
ENSCSEG00000019549	scaf4a	53	55.556	ENSMMUG00000001712	SCAF4	78	52.710	Macaca_mulatta
ENSCSEG00000019549	scaf4a	53	55.556	ENSMNEG00000032966	SCAF4	78	53.173	Macaca_nemestrina
ENSCSEG00000019549	scaf4a	52	55.023	ENSMLEG00000039674	SCAF4	78	52.309	Mandrillus_leucophaeus
ENSCSEG00000019549	scaf4a	75	67.731	ENSMAMG00000013223	scaf4a	99	70.125	Mastacembelus_armatus
ENSCSEG00000019549	scaf4a	99	68.734	ENSMZEG00005024349	scaf4a	100	70.207	Maylandia_zebra
ENSCSEG00000019549	scaf4a	57	52.489	ENSMGAG00000014515	SCAF4	86	49.144	Meleagris_gallopavo
ENSCSEG00000019549	scaf4a	52	57.143	ENSMICG00000005256	SCAF4	79	53.070	Microcebus_murinus
ENSCSEG00000019549	scaf4a	53	54.697	ENSNLEG00000003569	SCAF4	79	52.229	Nomascus_leucogenys
ENSCSEG00000019549	scaf4a	99	68.787	ENSONIG00000004687	scaf4a	100	69.720	Oreochromis_niloticus
ENSCSEG00000019549	scaf4a	99	63.074	ENSORLG00000004384	scaf4a	100	63.993	Oryzias_latipes
ENSCSEG00000019549	scaf4a	99	63.682	ENSORLG00020011857	scaf4a	100	64.351	Oryzias_latipes_hni
ENSCSEG00000019549	scaf4a	66	54.225	ENSORLG00020013853	scaf4b	58	67.066	Oryzias_latipes_hni
ENSCSEG00000019549	scaf4a	99	63.667	ENSORLG00015017880	scaf4a	100	64.508	Oryzias_latipes_hsok
ENSCSEG00000019549	scaf4a	99	64.184	ENSOMEG00000014482	scaf4a	99	64.770	Oryzias_melastigma
ENSCSEG00000019549	scaf4a	53	54.697	ENSPPAG00000028535	SCAF4	79	52.442	Pan_paniscus
ENSCSEG00000019549	scaf4a	52	53.313	ENSPPRG00000000635	SCAF4	79	51.233	Panthera_pardus
ENSCSEG00000019549	scaf4a	52	54.016	ENSPTIG00000021578	SCAF4	78	50.602	Panthera_tigris_altaica
ENSCSEG00000019549	scaf4a	53	54.697	ENSPTRG00000013848	SCAF4	79	52.442	Pan_troglodytes
ENSCSEG00000019549	scaf4a	53	55.556	ENSPANG00000017332	SCAF4	78	52.710	Papio_anubis
ENSCSEG00000019549	scaf4a	56	53.305	ENSPKIG00000022408	scaf4a	99	62.449	Paramormyrops_kingsleyae
ENSCSEG00000019549	scaf4a	53	40.889	ENSPSIG00000014242	SCAF4	83	51.141	Pelodiscus_sinensis
ENSCSEG00000019549	scaf4a	97	48.587	ENSPMGG00000016741	scaf4a	99	51.542	Periophthalmus_magnuspinnatus
ENSCSEG00000019549	scaf4a	86	63.397	ENSPFOG00000017156	scaf4a	97	64.447	Poecilia_formosa
ENSCSEG00000019549	scaf4a	68	69.504	ENSPLAG00000001972	scaf4a	96	69.086	Poecilia_latipinna
ENSCSEG00000019549	scaf4a	53	55.015	ENSPPYG00000011355	SCAF4	79	52.548	Pongo_abelii
ENSCSEG00000019549	scaf4a	69	50.120	ENSPCOG00000018710	SCAF4	79	52.340	Propithecus_coquereli
ENSCSEG00000019549	scaf4a	53	56.555	ENSPVAG00000005220	SCAF4	79	52.559	Pteropus_vampyrus
ENSCSEG00000019549	scaf4a	60	47.084	ENSPNYG00000010526	scaf4b	71	51.027	Pundamilia_nyererei
ENSCSEG00000019549	scaf4a	52	54.386	ENSRBIG00000040007	SCAF4	78	50.875	Rhinopithecus_bieti
ENSCSEG00000019549	scaf4a	53	55.387	ENSRROG00000029488	SCAF4	79	52.492	Rhinopithecus_roxellana
ENSCSEG00000019549	scaf4a	56	46.979	ENSSFOG00015006338	scaf4a	95	46.595	Scleropages_formosus
ENSCSEG00000019549	scaf4a	99	71.307	ENSSMAG00000017901	scaf4a	72	74.413	Scophthalmus_maximus
ENSCSEG00000019549	scaf4a	78	47.734	ENSSMAG00000003738	scaf4b	64	55.462	Scophthalmus_maximus
ENSCSEG00000019549	scaf4a	99	75.214	ENSSDUG00000012918	scaf4a	100	75.258	Seriola_dumerili
ENSCSEG00000019549	scaf4a	99	74.957	ENSSLDG00000021671	scaf4a	100	75.515	Seriola_lalandi_dorsalis
ENSCSEG00000019549	scaf4a	53	55.556	ENSSSCG00000021023	SCAF4	79	53.074	Sus_scrofa
ENSCSEG00000019549	scaf4a	83	55.676	ENSTNIG00000009945	scaf4a	81	63.121	Tetraodon_nigroviridis
ENSCSEG00000019549	scaf4a	52	54.574	ENSTTRG00000010963	SCAF4	79	51.290	Tursiops_truncatus
ENSCSEG00000019549	scaf4a	51	56.151	ENSUAMG00000008860	SCAF4	79	53.493	Ursus_americanus
ENSCSEG00000019549	scaf4a	50	56.811	ENSUMAG00000016962	SCAF4	81	51.713	Ursus_maritimus
ENSCSEG00000019549	scaf4a	52	54.688	ENSVVUG00000002953	SCAF4	79	51.679	Vulpes_vulpes