EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019614 (Gene tree)
Gene ID: -
Gene Symbol: synj1
Alias: fb02f11|fi15a11|no optokinetic response c|nrc|slacker|slak|wu:fb02f11|wu:fi15a11
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 15420 bases
Position: chr19:14676784-14692203
Accession: 103395501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030630	Exo_endo_phos	PF03372.23	4.8e-14	1	1
ENSCSEP00000030620	Exo_endo_phos	PF03372.23	4.9e-14	1	1
ENSCSEP00000030630	DUF1866	PF08952.11	6.4e-57	1	1
ENSCSEP00000030620	DUF1866	PF08952.11	6.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031026	-	3899	XM_017041518	ENSCSEP00000030620	1286 (aa)	XP_016897007	-
ENSCSET00000031036	-	3857	-	ENSCSEP00000030630	1272 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000019614's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019614's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019614	synj1	99	71.172	ENSG00000159082	SYNJ1	100	81.560	Homo_sapiens
ENSCSEG00000019614	synj1	95	93.344	ENSAPOG00000002809	synj1	95	89.642	Acanthochromis_polyacanthus
ENSCSEG00000019614	synj1	99	67.841	ENSAMEG00000015028	SYNJ1	68	76.022	Ailuropoda_melanoleuca
ENSCSEG00000019614	synj1	98	88.739	ENSACIG00000008857	synj1	90	91.131	Amphilophus_citrinellus
ENSCSEG00000019614	synj1	98	91.370	ENSAOCG00000009835	synj1	95	87.665	Amphiprion_ocellaris
ENSCSEG00000019614	synj1	98	90.600	ENSAPEG00000021010	synj1	75	90.635	Amphiprion_percula
ENSCSEG00000019614	synj1	99	90.431	ENSATEG00000002306	synj1	75	89.486	Anabas_testudineus
ENSCSEG00000019614	synj1	94	68.993	ENSAPLG00000011832	SYNJ1	68	75.594	Anas_platyrhynchos
ENSCSEG00000019614	synj1	97	70.362	ENSACAG00000003006	-	84	77.616	Anolis_carolinensis
ENSCSEG00000019614	synj1	99	68.441	ENSANAG00000027325	SYNJ1	84	75.956	Aotus_nancymaae
ENSCSEG00000019614	synj1	98	90.837	ENSACLG00000002255	synj1	95	89.810	Astatotilapia_calliptera
ENSCSEG00000019614	synj1	98	84.634	ENSAMXG00000008208	synj1	67	88.278	Astyanax_mexicanus
ENSCSEG00000019614	synj1	98	72.183	ENSBTAG00000003063	SYNJ1	83	75.815	Bos_taurus
ENSCSEG00000019614	synj1	99	70.734	ENSCJAG00000009187	SYNJ1	84	75.978	Callithrix_jacchus
ENSCSEG00000019614	synj1	99	69.391	ENSCAFG00000009041	SYNJ1	86	74.322	Canis_familiaris
ENSCSEG00000019614	synj1	99	71.149	ENSCAFG00020025776	SYNJ1	95	67.216	Canis_lupus_dingo
ENSCSEG00000019614	synj1	91	75.234	ENSCHIG00000005095	SYNJ1	72	75.931	Capra_hircus
ENSCSEG00000019614	synj1	99	71.049	ENSTSYG00000014541	SYNJ1	97	67.652	Carlito_syrichta
ENSCSEG00000019614	synj1	95	62.158	ENSCAPG00000014483	SYNJ1	75	67.015	Cavia_aperea
ENSCSEG00000019614	synj1	99	70.804	ENSCPOG00000012182	SYNJ1	83	76.073	Cavia_porcellus
ENSCSEG00000019614	synj1	99	70.140	ENSCCAG00000020825	SYNJ1	84	75.865	Cebus_capucinus
ENSCSEG00000019614	synj1	99	70.204	ENSCATG00000033891	SYNJ1	86	75.362	Cercocebus_atys
ENSCSEG00000019614	synj1	91	71.839	ENSCLAG00000009796	SYNJ1	100	81.366	Chinchilla_lanigera
ENSCSEG00000019614	synj1	99	68.302	ENSCSAG00000009654	SYNJ1	84	76.022	Chlorocebus_sabaeus
ENSCSEG00000019614	synj1	66	73.084	ENSCHOG00000012390	SYNJ1	54	73.084	Choloepus_hoffmanni
ENSCSEG00000019614	synj1	93	73.537	ENSCPBG00000006402	SYNJ1	87	76.277	Chrysemys_picta_bellii
ENSCSEG00000019614	synj1	98	71.328	ENSCANG00000031359	SYNJ1	85	76.022	Colobus_angolensis_palliatus
ENSCSEG00000019614	synj1	99	70.478	ENSCGRG00001010861	Synj1	83	75.752	Cricetulus_griseus_chok1gshd
ENSCSEG00000019614	synj1	99	67.730	ENSCGRG00000015749	Synj1	100	80.797	Cricetulus_griseus_crigri
ENSCSEG00000019614	synj1	98	87.500	ENSCVAG00000019250	synj1	95	87.062	Cyprinodon_variegatus
ENSCSEG00000019614	synj1	99	82.780	ENSDARG00000025011	synj1	95	83.505	Danio_rerio
ENSCSEG00000019614	synj1	99	65.764	ENSDNOG00000010732	SYNJ1	70	72.760	Dasypus_novemcinctus
ENSCSEG00000019614	synj1	55	81.081	ENSDORG00000014735	-	100	81.081	Dipodomys_ordii
ENSCSEG00000019614	synj1	85	78.417	ENSETEG00000018674	SYNJ1	60	78.417	Echinops_telfairi
ENSCSEG00000019614	synj1	99	71.275	ENSEASG00005006287	SYNJ1	98	77.042	Equus_asinus_asinus
ENSCSEG00000019614	synj1	99	71.451	ENSECAG00000004829	SYNJ1	86	75.525	Equus_caballus
ENSCSEG00000019614	synj1	89	71.589	ENSEEUG00000005150	SYNJ1	63	71.589	Erinaceus_europaeus
ENSCSEG00000019614	synj1	99	78.084	ENSELUG00000009731	synj1	81	82.523	Esox_lucius
ENSCSEG00000019614	synj1	91	75.128	ENSFCAG00000012498	SYNJ1	85	75.749	Felis_catus
ENSCSEG00000019614	synj1	73	59.178	ENSFALG00000004680	SYNJ1	61	69.291	Ficedula_albicollis
ENSCSEG00000019614	synj1	99	68.812	ENSFDAG00000016818	SYNJ1	100	81.650	Fukomys_damarensis
ENSCSEG00000019614	synj1	98	88.471	ENSFHEG00000017689	synj1	77	86.967	Fundulus_heteroclitus
ENSCSEG00000019614	synj1	82	86.224	ENSGMOG00000014852	synj1	80	86.224	Gadus_morhua
ENSCSEG00000019614	synj1	97	71.213	ENSGALG00000034317	SYNJ1	70	75.207	Gallus_gallus
ENSCSEG00000019614	synj1	97	89.254	ENSGAFG00000019466	synj1	76	86.356	Gambusia_affinis
ENSCSEG00000019614	synj1	99	84.121	ENSGACG00000020575	synj1	96	80.655	Gasterosteus_aculeatus
ENSCSEG00000019614	synj1	99	69.977	ENSGAGG00000022523	SYNJ1	83	75.518	Gopherus_agassizii
ENSCSEG00000019614	synj1	98	71.462	ENSGGOG00000015945	SYNJ1	86	75.453	Gorilla_gorilla
ENSCSEG00000019614	synj1	98	90.916	ENSHBUG00000007774	synj1	95	89.889	Haplochromis_burtoni
ENSCSEG00000019614	synj1	99	68.992	ENSHGLG00000006420	SYNJ1	100	80.797	Heterocephalus_glaber_female
ENSCSEG00000019614	synj1	99	68.917	ENSHGLG00100012591	SYNJ1	100	80.797	Heterocephalus_glaber_male
ENSCSEG00000019614	synj1	94	94.589	ENSHCOG00000012774	synj1	94	94.589	Hippocampus_comes
ENSCSEG00000019614	synj1	99	83.773	ENSIPUG00000010691	SYNJ1	79	83.014	Ictalurus_punctatus
ENSCSEG00000019614	synj1	99	68.144	ENSSTOG00000015806	SYNJ1	84	76.022	Ictidomys_tridecemlineatus
ENSCSEG00000019614	synj1	99	63.253	ENSJJAG00000020168	Synj1	69	70.481	Jaculus_jaculus
ENSCSEG00000019614	synj1	86	91.439	ENSKMAG00000004221	synj1	93	86.194	Kryptolebias_marmoratus
ENSCSEG00000019614	synj1	98	88.702	ENSLBEG00000015081	synj1	91	91.877	Labrus_bergylta
ENSCSEG00000019614	synj1	86	75.928	ENSLACG00000005928	SYNJ1	70	76.359	Latimeria_chalumnae
ENSCSEG00000019614	synj1	99	73.847	ENSLOCG00000009230	synj1	73	82.998	Lepisosteus_oculatus
ENSCSEG00000019614	synj1	99	67.381	ENSLAFG00000011806	SYNJ1	69	75.568	Loxodonta_africana
ENSCSEG00000019614	synj1	97	68.320	ENSMFAG00000018883	SYNJ1	84	74.883	Macaca_fascicularis
ENSCSEG00000019614	synj1	99	67.997	ENSMMUG00000004624	SYNJ1	84	75.725	Macaca_mulatta
ENSCSEG00000019614	synj1	99	70.008	ENSMNEG00000040077	SYNJ1	79	76.022	Macaca_nemestrina
ENSCSEG00000019614	synj1	99	69.930	ENSMLEG00000037029	SYNJ1	85	75.931	Mandrillus_leucophaeus
ENSCSEG00000019614	synj1	98	91.211	ENSMAMG00000013404	synj1	76	89.179	Mastacembelus_armatus
ENSCSEG00000019614	synj1	99	89.164	ENSMZEG00005024358	synj1	98	88.932	Maylandia_zebra
ENSCSEG00000019614	synj1	99	67.600	ENSMGAG00000014522	SYNJ1	69	73.508	Meleagris_gallopavo
ENSCSEG00000019614	synj1	99	67.955	ENSMAUG00000009743	Synj1	100	80.939	Mesocricetus_auratus
ENSCSEG00000019614	synj1	98	68.615	ENSMICG00000034953	SYNJ1	86	75.453	Microcebus_murinus
ENSCSEG00000019614	synj1	98	84.597	ENSMMOG00000010203	synj1	85	91.328	Mola_mola
ENSCSEG00000019614	synj1	91	67.539	ENSMODG00000021073	SYNJ1	82	72.551	Monodelphis_domestica
ENSCSEG00000019614	synj1	98	90.795	ENSMALG00000014015	synj1	76	89.611	Monopterus_albus
ENSCSEG00000019614	synj1	99	68.788	MGP_CAROLIEiJ_G0020951	Synj1	100	81.366	Mus_caroli
ENSCSEG00000019614	synj1	99	69.167	ENSMUSG00000022973	Synj1	100	81.366	Mus_musculus
ENSCSEG00000019614	synj1	99	68.405	MGP_PahariEiJ_G0016656	Synj1	100	81.223	Mus_pahari
ENSCSEG00000019614	synj1	99	69.015	MGP_SPRETEiJ_G0021857	Synj1	100	81.223	Mus_spretus
ENSCSEG00000019614	synj1	99	67.696	ENSMPUG00000001153	SYNJ1	70	75.271	Mustela_putorius_furo
ENSCSEG00000019614	synj1	53	80.650	ENSMLUG00000026584	-	100	80.650	Myotis_lucifugus
ENSCSEG00000019614	synj1	57	63.579	ENSMLUG00000005764	-	54	70.962	Myotis_lucifugus
ENSCSEG00000019614	synj1	99	70.084	ENSNGAG00000000453	Synj1	100	80.939	Nannospalax_galili
ENSCSEG00000019614	synj1	94	87.730	ENSNBRG00000011936	synj1	90	86.844	Neolamprologus_brichardi
ENSCSEG00000019614	synj1	84	68.083	ENSNLEG00000003734	SYNJ1	84	73.850	Nomascus_leucogenys
ENSCSEG00000019614	synj1	85	59.748	ENSMEUG00000004158	-	65	63.048	Notamacropus_eugenii
ENSCSEG00000019614	synj1	87	78.467	ENSOPRG00000013602	SYNJ1	63	78.467	Ochotona_princeps
ENSCSEG00000019614	synj1	55	80.939	ENSODEG00000002409	-	100	80.939	Octodon_degus
ENSCSEG00000019614	synj1	98	85.559	ENSONIG00000004667	synj1	78	93.636	Oreochromis_niloticus
ENSCSEG00000019614	synj1	95	66.149	ENSOANG00000006929	SYNJ1	69	74.860	Ornithorhynchus_anatinus
ENSCSEG00000019614	synj1	99	69.142	ENSOCUG00000001420	SYNJ1	67	77.069	Oryctolagus_cuniculus
ENSCSEG00000019614	synj1	98	88.871	ENSORLG00000004320	synj1	95	88.748	Oryzias_latipes
ENSCSEG00000019614	synj1	98	85.510	ENSORLG00020011994	synj1	86	88.616	Oryzias_latipes_hni
ENSCSEG00000019614	synj1	94	90.234	ENSORLG00015018077	synj1	74	87.510	Oryzias_latipes_hsok
ENSCSEG00000019614	synj1	94	88.564	ENSOMEG00000014322	synj1	95	84.326	Oryzias_melastigma
ENSCSEG00000019614	synj1	99	65.509	ENSOGAG00000006010	SYNJ1	68	72.423	Otolemur_garnettii
ENSCSEG00000019614	synj1	99	68.120	ENSOARG00000013414	SYNJ1	68	75.271	Ovis_aries
ENSCSEG00000019614	synj1	98	71.485	ENSPPAG00000026784	SYNJ1	85	76.113	Pan_paniscus
ENSCSEG00000019614	synj1	91	75.128	ENSPPRG00000023469	SYNJ1	85	75.749	Panthera_pardus
ENSCSEG00000019614	synj1	99	67.289	ENSPTIG00000007930	SYNJ1	85	75.840	Panthera_tigris_altaica
ENSCSEG00000019614	synj1	99	71.250	ENSPTRG00000048135	-	86	75.453	Pan_troglodytes
ENSCSEG00000019614	synj1	99	71.250	ENSPTRG00000023787	SYNJ1	86	75.453	Pan_troglodytes
ENSCSEG00000019614	synj1	99	70.008	ENSPANG00000022531	SYNJ1	85	76.022	Papio_anubis
ENSCSEG00000019614	synj1	86	85.494	ENSPKIG00000022603	synj1	89	84.755	Paramormyrops_kingsleyae
ENSCSEG00000019614	synj1	95	89.413	ENSPMGG00000016831	synj1	89	84.856	Periophthalmus_magnuspinnatus
ENSCSEG00000019614	synj1	99	68.298	ENSPEMG00000018767	Synj1	100	81.366	Peromyscus_maniculatus_bairdii
ENSCSEG00000019614	synj1	80	59.614	ENSPMAG00000002887	synj1	80	58.714	Petromyzon_marinus
ENSCSEG00000019614	synj1	99	68.696	ENSPCIG00000016372	SYNJ1	83	74.387	Phascolarctos_cinereus
ENSCSEG00000019614	synj1	97	88.871	ENSPFOG00000016886	synj1	95	87.043	Poecilia_formosa
ENSCSEG00000019614	synj1	97	88.352	ENSPLAG00000017559	synj1	95	83.994	Poecilia_latipinna
ENSCSEG00000019614	synj1	97	88.801	ENSPMEG00000007643	synj1	77	85.930	Poecilia_mexicana
ENSCSEG00000019614	synj1	98	90.143	ENSPREG00000012412	synj1	95	88.624	Poecilia_reticulata
ENSCSEG00000019614	synj1	91	71.721	ENSPPYG00000011365	SYNJ1	79	75.840	Pongo_abelii
ENSCSEG00000019614	synj1	70	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSCSEG00000019614	synj1	92	75.616	ENSPCOG00000024841	SYNJ1	81	75.931	Propithecus_coquereli
ENSCSEG00000019614	synj1	91	68.144	ENSPVAG00000000892	SYNJ1	70	71.935	Pteropus_vampyrus
ENSCSEG00000019614	synj1	98	88.254	ENSPNYG00000022989	synj1	95	88.103	Pundamilia_nyererei
ENSCSEG00000019614	synj1	86	89.599	ENSPNAG00000021119	synj1	91	89.263	Pygocentrus_nattereri
ENSCSEG00000019614	synj1	99	70.521	ENSRNOG00000002051	Synj1	85	76.208	Rattus_norvegicus
ENSCSEG00000019614	synj1	98	71.249	ENSRBIG00000034477	SYNJ1	85	75.931	Rhinopithecus_bieti
ENSCSEG00000019614	synj1	99	68.908	ENSRROG00000039256	SYNJ1	85	76.022	Rhinopithecus_roxellana
ENSCSEG00000019614	synj1	98	69.285	ENSSBOG00000021001	SYNJ1	84	75.956	Saimiri_boliviensis_boliviensis
ENSCSEG00000019614	synj1	98	66.820	ENSSHAG00000008538	SYNJ1	70	74.319	Sarcophilus_harrisii
ENSCSEG00000019614	synj1	99	83.554	ENSSFOG00015006095	synj1	76	84.761	Scleropages_formosus
ENSCSEG00000019614	synj1	99	88.768	ENSSMAG00000018066	synj1	95	88.108	Scophthalmus_maximus
ENSCSEG00000019614	synj1	98	91.819	ENSSDUG00000013058	synj1	76	89.644	Seriola_dumerili
ENSCSEG00000019614	synj1	98	92.442	ENSSLDG00000021406	synj1	95	90.779	Seriola_lalandi_dorsalis
ENSCSEG00000019614	synj1	97	70.324	ENSSPUG00000012552	SYNJ1	71	75.523	Sphenodon_punctatus
ENSCSEG00000019614	synj1	92	91.137	ENSSPAG00000006812	SYNJ1	75	90.051	Stegastes_partitus
ENSCSEG00000019614	synj1	98	90.427	ENSSPAG00000017029	synj1	83	92.573	Stegastes_partitus
ENSCSEG00000019614	synj1	99	69.495	ENSSSCG00000012035	SYNJ1	84	75.475	Sus_scrofa
ENSCSEG00000019614	synj1	97	67.661	ENSTGUG00000013445	SYNJ1	70	75.000	Taeniopygia_guttata
ENSCSEG00000019614	synj1	94	89.900	ENSTRUG00000006907	synj1	92	86.323	Takifugu_rubripes
ENSCSEG00000019614	synj1	99	80.859	ENSTNIG00000009940	synj1	95	82.422	Tetraodon_nigroviridis
ENSCSEG00000019614	synj1	75	82.595	ENSTBEG00000016298	SYNJ1	60	82.595	Tupaia_belangeri
ENSCSEG00000019614	synj1	99	62.803	ENSTTRG00000002222	SYNJ1	71	68.944	Tursiops_truncatus
ENSCSEG00000019614	synj1	99	71.118	ENSUAMG00000018606	SYNJ1	99	78.283	Ursus_americanus
ENSCSEG00000019614	synj1	99	70.707	ENSUMAG00000018419	SYNJ1	99	78.474	Ursus_maritimus
ENSCSEG00000019614	synj1	89	84.286	ENSVPAG00000001241	SYNJ1	58	84.286	Vicugna_pacos
ENSCSEG00000019614	synj1	99	68.293	ENSVVUG00000023125	SYNJ1	84	75.840	Vulpes_vulpes
ENSCSEG00000019614	synj1	99	65.768	ENSXETG00000009899	synj1	69	73.622	Xenopus_tropicalis
ENSCSEG00000019614	synj1	97	89.457	ENSXCOG00000011896	synj1	95	87.302	Xiphophorus_couchianus
ENSCSEG00000019614	synj1	97	90.756	ENSXMAG00000017524	synj1	95	88.862	Xiphophorus_maculatus