EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000019690 (Gene tree)
Gene ID: 103395516
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 7777 bases
Position: chr19:14942997-14950773
Accession: 103395516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030758	RRM_5	PF13893.6	3.8e-11	1	2
ENSCSEP00000030758	RRM_5	PF13893.6	3.8e-11	2	2
ENSCSEP00000030750	RRM_5	PF13893.6	4.1e-11	1	2
ENSCSEP00000030750	RRM_5	PF13893.6	4.1e-11	2	2
ENSCSEP00000030762	RRM_5	PF13893.6	4.5e-11	1	2
ENSCSEP00000030762	RRM_5	PF13893.6	4.5e-11	2	2
ENSCSEP00000030758	RRM_1	PF00076.22	2.7e-32	1	2
ENSCSEP00000030758	RRM_1	PF00076.22	2.7e-32	2	2
ENSCSEP00000030750	RRM_1	PF00076.22	2.9e-32	1	2
ENSCSEP00000030750	RRM_1	PF00076.22	2.9e-32	2	2
ENSCSEP00000030762	RRM_1	PF00076.22	3.2e-32	1	2
ENSCSEP00000030762	RRM_1	PF00076.22	3.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031156	-	1596	-	ENSCSEP00000030750	531 (aa)	-	-
ENSCSET00000031164	-	1555	-	ENSCSEP00000030758	512 (aa)	-	-
ENSCSET00000031168	-	1654	XM_008333246	ENSCSEP00000030762	544 (aa)	XP_008331468	UPI000497FB52

Gene Model

Click here to download ENSCSEG00000019690's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019690's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000019690	-	69	52.184	ENSCSEG00000000357	rbm14b	78	52.482

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019690	-	73	61.232	ENSAPOG00000021712	rbm14b	69	61.232	Acanthochromis_polyacanthus
ENSCSEG00000019690	-	99	86.182	ENSAPOG00000003380	-	99	85.818	Acanthochromis_polyacanthus
ENSCSEG00000019690	-	73	61.232	ENSACIG00000000381	rbm14b	82	46.488	Amphilophus_citrinellus
ENSCSEG00000019690	-	99	82.214	ENSACIG00000021173	-	99	82.033	Amphilophus_citrinellus
ENSCSEG00000019690	-	100	85.818	ENSAOCG00000001659	-	100	85.636	Amphiprion_ocellaris
ENSCSEG00000019690	-	66	61.372	ENSAOCG00000008941	rbm14b	80	55.000	Amphiprion_ocellaris
ENSCSEG00000019690	-	99	86.339	ENSAPEG00000016988	-	99	86.157	Amphiprion_percula
ENSCSEG00000019690	-	69	55.256	ENSAPEG00000003161	rbm14b	82	53.250	Amphiprion_percula
ENSCSEG00000019690	-	73	60.507	ENSATEG00000003034	rbm14b	78	55.362	Anabas_testudineus
ENSCSEG00000019690	-	100	82.342	ENSATEG00000009700	-	97	82.129	Anabas_testudineus
ENSCSEG00000019690	-	100	83.152	ENSACLG00000009112	-	97	83.696	Astatotilapia_calliptera
ENSCSEG00000019690	-	75	45.885	ENSACLG00000014355	rbm14b	80	45.979	Astatotilapia_calliptera
ENSCSEG00000019690	-	67	60.662	ENSAMXG00000031225	rbm14b	82	47.640	Astyanax_mexicanus
ENSCSEG00000019690	-	75	60.546	ENSAMXG00000007233	rbm14a	80	62.402	Astyanax_mexicanus
ENSCSEG00000019690	-	75	46.888	ENSCVAG00000013776	rbm14b	83	47.510	Cyprinodon_variegatus
ENSCSEG00000019690	-	100	81.655	ENSCVAG00000014858	-	100	82.014	Cyprinodon_variegatus
ENSCSEG00000019690	-	74	59.698	ENSDARG00000012723	rbm14a	77	62.032	Danio_rerio
ENSCSEG00000019690	-	71	60.073	ENSDARG00000103834	rbm14b	64	60.806	Danio_rerio
ENSCSEG00000019690	-	65	62.825	ENSELUG00000004690	rbm14b	76	62.825	Esox_lucius
ENSCSEG00000019690	-	86	55.311	ENSELUG00000023633	rbm14a	81	55.634	Esox_lucius
ENSCSEG00000019690	-	100	78.897	ENSFHEG00000020913	-	100	80.226	Fundulus_heteroclitus
ENSCSEG00000019690	-	51	61.818	ENSFHEG00000021265	rbm14b	83	47.609	Fundulus_heteroclitus
ENSCSEG00000019690	-	74	77.749	ENSGMOG00000010840	-	75	80.447	Gadus_morhua
ENSCSEG00000019690	-	100	80.306	ENSGAFG00000004455	-	100	80.682	Gambusia_affinis
ENSCSEG00000019690	-	73	60.870	ENSGAFG00000001924	rbm14b	66	60.870	Gambusia_affinis
ENSCSEG00000019690	-	90	84.416	ENSGACG00000020440	-	95	83.983	Gasterosteus_aculeatus
ENSCSEG00000019690	-	100	83.152	ENSHBUG00000003665	-	97	83.696	Haplochromis_burtoni
ENSCSEG00000019690	-	75	45.885	ENSHBUG00000016754	rbm14b	80	45.979	Haplochromis_burtoni
ENSCSEG00000019690	-	80	51.991	ENSHCOG00000012571	rbm14b	99	65.409	Hippocampus_comes
ENSCSEG00000019690	-	95	74.813	ENSHCOG00000004071	-	100	74.393	Hippocampus_comes
ENSCSEG00000019690	-	67	59.926	ENSIPUG00000009089	rbm14b	83	48.315	Ictalurus_punctatus
ENSCSEG00000019690	-	75	54.762	ENSIPUG00000021256	rbm14a	80	55.890	Ictalurus_punctatus
ENSCSEG00000019690	-	65	60.573	ENSKMAG00000020444	rbm14b	66	61.091	Kryptolebias_marmoratus
ENSCSEG00000019690	-	99	81.044	ENSKMAG00000008514	-	99	81.034	Kryptolebias_marmoratus
ENSCSEG00000019690	-	65	60.854	ENSLBEG00000027934	rbm14b	60	61.455	Labrus_bergylta
ENSCSEG00000019690	-	100	82.117	ENSLBEG00000001217	-	100	81.752	Labrus_bergylta
ENSCSEG00000019690	-	75	45.756	ENSMAMG00000014394	rbm14b	78	46.058	Mastacembelus_armatus
ENSCSEG00000019690	-	100	83.394	ENSMAMG00000021313	-	100	82.852	Mastacembelus_armatus
ENSCSEG00000019690	-	75	45.885	ENSMZEG00005020834	rbm14b	82	45.979	Maylandia_zebra
ENSCSEG00000019690	-	100	83.152	ENSMZEG00005001201	-	100	83.696	Maylandia_zebra
ENSCSEG00000019690	-	72	56.364	ENSMMOG00000012912	rbm14b	69	56.364	Mola_mola
ENSCSEG00000019690	-	100	79.963	ENSMMOG00000014501	-	99	80.699	Mola_mola
ENSCSEG00000019690	-	69	55.026	ENSMALG00000015445	rbm14b	83	55.784	Monopterus_albus
ENSCSEG00000019690	-	75	45.885	ENSNBRG00000003378	rbm14b	82	45.979	Neolamprologus_brichardi
ENSCSEG00000019690	-	99	83.242	ENSNBRG00000004960	-	99	83.060	Neolamprologus_brichardi
ENSCSEG00000019690	-	69	56.989	ENSONIG00000013035	rbm14b	80	57.963	Oreochromis_niloticus
ENSCSEG00000019690	-	90	81.953	ENSONIG00000008557	-	95	81.741	Oreochromis_niloticus
ENSCSEG00000019690	-	100	81.159	ENSORLG00000001900	-	100	80.381	Oryzias_latipes
ENSCSEG00000019690	-	75	46.680	ENSORLG00000008051	rbm14b	82	46.680	Oryzias_latipes
ENSCSEG00000019690	-	75	46.680	ENSORLG00020005551	rbm14b	80	46.570	Oryzias_latipes_hni
ENSCSEG00000019690	-	100	81.159	ENSORLG00020019144	-	100	80.381	Oryzias_latipes_hni
ENSCSEG00000019690	-	75	46.473	ENSORLG00015022683	rbm14b	82	46.473	Oryzias_latipes_hsok
ENSCSEG00000019690	-	100	81.159	ENSORLG00015000082	-	100	80.978	Oryzias_latipes_hsok
ENSCSEG00000019690	-	81	85.366	ENSOMEG00000006508	-	96	91.333	Oryzias_melastigma
ENSCSEG00000019690	-	73	60.870	ENSOMEG00000000910	rbm14b	78	53.283	Oryzias_melastigma
ENSCSEG00000019690	-	70	49.887	ENSPKIG00000009078	rbm14b	82	48.869	Paramormyrops_kingsleyae
ENSCSEG00000019690	-	72	61.011	ENSPMGG00000013064	rbm14b	80	47.289	Periophthalmus_magnuspinnatus
ENSCSEG00000019690	-	81	80.723	ENSPMGG00000018869	-	93	88.591	Periophthalmus_magnuspinnatus
ENSCSEG00000019690	-	69	47.788	ENSPFOG00000003614	rbm14b	80	47.609	Poecilia_formosa
ENSCSEG00000019690	-	100	81.107	ENSPFOG00000004843	-	100	81.664	Poecilia_formosa
ENSCSEG00000019690	-	100	81.107	ENSPLAG00000017359	-	100	81.664	Poecilia_latipinna
ENSCSEG00000019690	-	52	60.870	ENSPLAG00000001395	rbm14b	80	47.609	Poecilia_latipinna
ENSCSEG00000019690	-	69	47.788	ENSPMEG00000012911	rbm14b	80	47.609	Poecilia_mexicana
ENSCSEG00000019690	-	100	82.374	ENSPMEG00000004894	-	100	82.554	Poecilia_mexicana
ENSCSEG00000019690	-	100	80.725	ENSPREG00000007274	-	100	81.474	Poecilia_reticulata
ENSCSEG00000019690	-	69	47.333	ENSPREG00000003013	rbm14b	81	47.609	Poecilia_reticulata
ENSCSEG00000019690	-	100	83.152	ENSPNYG00000015906	-	100	83.696	Pundamilia_nyererei
ENSCSEG00000019690	-	74	57.692	ENSPNAG00000012473	rbm14a	84	57.212	Pygocentrus_nattereri
ENSCSEG00000019690	-	67	61.029	ENSPNAG00000001977	rbm14b	80	47.982	Pygocentrus_nattereri
ENSCSEG00000019690	-	71	49.327	ENSSFOG00015023796	rbm14b	83	48.884	Scleropages_formosus
ENSCSEG00000019690	-	66	62.455	ENSSMAG00000004522	rbm14b	67	62.681	Scophthalmus_maximus
ENSCSEG00000019690	-	100	85.428	ENSSMAG00000002055	-	100	85.610	Scophthalmus_maximus
ENSCSEG00000019690	-	100	84.296	ENSSDUG00000020756	-	100	85.560	Seriola_dumerili
ENSCSEG00000019690	-	73	61.232	ENSSDUG00000007975	rbm14b	82	46.502	Seriola_dumerili
ENSCSEG00000019690	-	100	84.560	ENSSLDG00000006311	-	100	85.099	Seriola_lalandi_dorsalis
ENSCSEG00000019690	-	73	61.232	ENSSLDG00000006472	rbm14b	82	46.502	Seriola_lalandi_dorsalis
ENSCSEG00000019690	-	73	61.232	ENSSPAG00000004231	rbm14b	81	46.407	Stegastes_partitus
ENSCSEG00000019690	-	99	84.755	ENSSPAG00000010825	-	99	84.574	Stegastes_partitus
ENSCSEG00000019690	-	100	76.686	ENSTRUG00000009504	-	93	76.527	Takifugu_rubripes
ENSCSEG00000019690	-	71	61.091	ENSTRUG00000005716	rbm14b	65	61.091	Takifugu_rubripes
ENSCSEG00000019690	-	100	65.814	ENSTNIG00000000058	-	100	73.856	Tetraodon_nigroviridis
ENSCSEG00000019690	-	69	52.011	ENSTNIG00000006844	rbm14b	79	51.493	Tetraodon_nigroviridis
ENSCSEG00000019690	-	99	79.596	ENSXCOG00000006825	-	99	79.798	Xiphophorus_couchianus
ENSCSEG00000019690	-	75	46.281	ENSXMAG00000008390	rbm14b	83	46.901	Xiphophorus_maculatus
ENSCSEG00000019690	-	100	82.194	ENSXMAG00000000338	-	100	82.374	Xiphophorus_maculatus