EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019700 (Gene tree)
Gene ID: 103396857
Gene Symbol: cherp
Alias: fc83d01|ik:tdsubc_2h12|tdsubc_2h12|wu:fc83d01|xx:tdsubc_2h12|zgc:55518
Full Name: calcium homeostasis endoplasmic reticulum protein
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11135 bases
Position: chr2:8380233-8391367
Accession: 103396857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030788	Surp	PF01805.20	9.5e-17	1	1
ENSCSEP00000030797	Surp	PF01805.20	1.2e-16	1	1
ENSCSEP00000030792	Surp	PF01805.20	1.3e-16	1	1
ENSCSEP00000030824	G-patch	PF01585.23	1.5e-10	1	1
ENSCSEP00000030810	G-patch	PF01585.23	1.6e-10	1	1
ENSCSEP00000030813	G-patch	PF01585.23	1.6e-10	1	1
ENSCSEP00000030833	G-patch	PF01585.23	1.6e-10	1	1
ENSCSEP00000030788	G-patch	PF01585.23	1.6e-10	1	1
ENSCSEP00000030797	G-patch	PF01585.23	1.7e-10	1	1
ENSCSEP00000030792	G-patch	PF01585.23	4.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031195	-	2739	-	ENSCSEP00000030788	912 (aa)	-	-
ENSCSET00000031199	-	2954	XM_008335109	ENSCSEP00000030792	938 (aa)	XP_008333331	-
ENSCSET00000031240	-	3271	-	ENSCSEP00000030833	896 (aa)	-	-
ENSCSET00000031220	-	3212	-	ENSCSEP00000030813	893 (aa)	-	-
ENSCSET00000031231	-	3173	-	ENSCSEP00000030824	880 (aa)	-	-
ENSCSET00000031203	-	2778	XM_008335122	ENSCSEP00000030797	925 (aa)	XP_008333344	UPI0004950BC4
ENSCSET00000031217	-	3212	-	ENSCSEP00000030810	893 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000019700's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019700	cherp	79	66.667	ENSG00000085872	CHERP	80	67.368	Homo_sapiens
ENSCSEG00000019700	cherp	64	86.679	ENSAPOG00000009646	cherp	98	85.790	Acanthochromis_polyacanthus
ENSCSEG00000019700	cherp	99	64.706	ENSAMEG00000010048	CHERP	80	68.011	Ailuropoda_melanoleuca
ENSCSEG00000019700	cherp	79	85.578	ENSACIG00000019242	cherp	81	84.345	Amphilophus_citrinellus
ENSCSEG00000019700	cherp	100	83.691	ENSAOCG00000017846	cherp	79	85.139	Amphiprion_ocellaris
ENSCSEG00000019700	cherp	100	83.996	ENSAPEG00000021128	cherp	79	85.655	Amphiprion_percula
ENSCSEG00000019700	cherp	100	87.514	ENSATEG00000006341	cherp	99	86.574	Anabas_testudineus
ENSCSEG00000019700	cherp	78	65.833	ENSAPLG00000010773	CHERP	78	66.118	Anas_platyrhynchos
ENSCSEG00000019700	cherp	79	65.718	ENSANAG00000024284	CHERP	83	63.294	Aotus_nancymaae
ENSCSEG00000019700	cherp	100	84.459	ENSACLG00000020053	cherp	80	84.865	Astatotilapia_calliptera
ENSCSEG00000019700	cherp	100	71.637	ENSAMXG00000021637	cherp	75	75.099	Astyanax_mexicanus
ENSCSEG00000019700	cherp	99	64.346	ENSBTAG00000005289	CHERP	82	67.148	Bos_taurus
ENSCSEG00000019700	cherp	85	66.038	ENSCJAG00000040462	CHERP	82	64.926	Callithrix_jacchus
ENSCSEG00000019700	cherp	78	67.463	ENSCAFG00000015671	CHERP	80	67.632	Canis_familiaris
ENSCSEG00000019700	cherp	99	61.287	ENSCAFG00020009941	CHERP	80	65.888	Canis_lupus_dingo
ENSCSEG00000019700	cherp	99	62.250	ENSCHIG00000013765	CHERP	94	88.608	Capra_hircus
ENSCSEG00000019700	cherp	93	60.748	ENSCAPG00000000910	CHERP	68	67.069	Cavia_aperea
ENSCSEG00000019700	cherp	99	63.285	ENSCPOG00000019949	CHERP	79	66.493	Cavia_porcellus
ENSCSEG00000019700	cherp	79	65.718	ENSCCAG00000031534	CHERP	80	65.629	Cebus_capucinus
ENSCSEG00000019700	cherp	79	65.504	ENSCATG00000031409	CHERP	80	65.674	Cercocebus_atys
ENSCSEG00000019700	cherp	91	63.369	ENSCLAG00000005484	CHERP	73	65.663	Chinchilla_lanigera
ENSCSEG00000019700	cherp	79	66.667	ENSCSAG00000005740	CHERP	80	67.500	Chlorocebus_sabaeus
ENSCSEG00000019700	cherp	78	67.470	ENSCPBG00000014970	CHERP	80	67.824	Chrysemys_picta_bellii
ENSCSEG00000019700	cherp	73	47.839	ENSCING00000004814	-	55	73.737	Ciona_intestinalis
ENSCSEG00000019700	cherp	79	66.929	ENSCANG00000032053	CHERP	80	67.632	Colobus_angolensis_palliatus
ENSCSEG00000019700	cherp	79	64.185	ENSCGRG00001023316	Cherp	80	65.290	Cricetulus_griseus_chok1gshd
ENSCSEG00000019700	cherp	78	66.358	ENSCGRG00000015901	Cherp	80	67.150	Cricetulus_griseus_crigri
ENSCSEG00000019700	cherp	75	82.602	ENSCVAG00000003622	cherp	93	81.884	Cyprinodon_variegatus
ENSCSEG00000019700	cherp	100	71.658	ENSDARG00000021812	cherp	100	78.764	Danio_rerio
ENSCSEG00000019700	cherp	99	63.920	ENSDORG00000027623	Cherp	80	68.514	Dipodomys_ordii
ENSCSEG00000019700	cherp	78	67.463	ENSEASG00005000428	CHERP	74	67.500	Equus_asinus_asinus
ENSCSEG00000019700	cherp	78	67.463	ENSECAG00000012713	CHERP	80	67.368	Equus_caballus
ENSCSEG00000019700	cherp	99	73.384	ENSELUG00000023026	cherp	80	76.027	Esox_lucius
ENSCSEG00000019700	cherp	78	66.057	ENSFCAG00000013172	CHERP	81	65.718	Felis_catus
ENSCSEG00000019700	cherp	79	66.842	ENSFALG00000013410	CHERP	69	67.021	Ficedula_albicollis
ENSCSEG00000019700	cherp	78	59.658	ENSFDAG00000015981	CHERP	81	61.265	Fukomys_damarensis
ENSCSEG00000019700	cherp	88	92.135	ENSFHEG00000009720	cherp	75	100.000	Fundulus_heteroclitus
ENSCSEG00000019700	cherp	99	77.018	ENSGMOG00000008654	cherp	80	79.178	Gadus_morhua
ENSCSEG00000019700	cherp	78	67.156	ENSGALG00000003824	CHERP	70	67.557	Gallus_gallus
ENSCSEG00000019700	cherp	100	79.912	ENSGACG00000002053	cherp	78	80.027	Gasterosteus_aculeatus
ENSCSEG00000019700	cherp	78	67.383	ENSGAGG00000014208	CHERP	80	67.690	Gopherus_agassizii
ENSCSEG00000019700	cherp	100	84.673	ENSHBUG00000007405	cherp	80	85.135	Haplochromis_burtoni
ENSCSEG00000019700	cherp	79	66.360	ENSHGLG00000002993	CHERP	79	67.857	Heterocephalus_glaber_female
ENSCSEG00000019700	cherp	78	81.276	ENSHCOG00000007691	cherp	79	80.567	Hippocampus_comes
ENSCSEG00000019700	cherp	100	71.353	ENSIPUG00000025008	cherp	79	76.060	Ictalurus_punctatus
ENSCSEG00000019700	cherp	78	67.560	ENSSTOG00000012089	CHERP	80	67.914	Ictidomys_tridecemlineatus
ENSCSEG00000019700	cherp	99	58.506	ENSJJAG00000017982	Cherp	82	66.885	Jaculus_jaculus
ENSCSEG00000019700	cherp	100	83.277	ENSKMAG00000009101	cherp	79	83.194	Kryptolebias_marmoratus
ENSCSEG00000019700	cherp	78	82.899	ENSLBEG00000007586	cherp	92	82.615	Labrus_bergylta
ENSCSEG00000019700	cherp	100	62.181	ENSLACG00000018221	CHERP	80	65.548	Latimeria_chalumnae
ENSCSEG00000019700	cherp	100	72.275	ENSLOCG00000003654	cherp	79	74.633	Lepisosteus_oculatus
ENSCSEG00000019700	cherp	78	66.845	ENSLAFG00000009096	CHERP	80	67.686	Loxodonta_africana
ENSCSEG00000019700	cherp	79	65.589	ENSMFAG00000033267	CHERP	80	65.759	Macaca_fascicularis
ENSCSEG00000019700	cherp	99	58.471	ENSMMUG00000012958	CHERP	82	65.759	Macaca_mulatta
ENSCSEG00000019700	cherp	79	65.589	ENSMNEG00000004125	CHERP	80	65.759	Macaca_nemestrina
ENSCSEG00000019700	cherp	68	83.444	ENSMLEG00000044337	CHERP	75	84.138	Mandrillus_leucophaeus
ENSCSEG00000019700	cherp	98	84.573	ENSMAMG00000022269	cherp	79	86.839	Mastacembelus_armatus
ENSCSEG00000019700	cherp	100	84.459	ENSMZEG00005018014	cherp	80	84.730	Maylandia_zebra
ENSCSEG00000019700	cherp	71	68.779	ENSMGAG00000005571	CHERP	71	68.858	Meleagris_gallopavo
ENSCSEG00000019700	cherp	99	60.314	ENSMAUG00000015856	Cherp	83	65.933	Mesocricetus_auratus
ENSCSEG00000019700	cherp	100	63.537	ENSMICG00000004577	CHERP	80	68.170	Microcebus_murinus
ENSCSEG00000019700	cherp	79	66.405	ENSMOCG00000014697	Cherp	79	67.280	Microtus_ochrogaster
ENSCSEG00000019700	cherp	100	83.409	ENSMMOG00000008525	cherp	92	85.356	Mola_mola
ENSCSEG00000019700	cherp	100	84.199	ENSMALG00000020688	cherp	79	85.445	Monopterus_albus
ENSCSEG00000019700	cherp	79	65.155	MGP_CAROLIEiJ_G0031220	Cherp	79	66.057	Mus_caroli
ENSCSEG00000019700	cherp	79	64.683	ENSMUSG00000052488	Cherp	79	65.971	Mus_musculus
ENSCSEG00000019700	cherp	79	65.882	MGP_PahariEiJ_G0021685	Cherp	79	66.755	Mus_pahari
ENSCSEG00000019700	cherp	79	65.195	MGP_SPRETEiJ_G0032341	Cherp	79	66.230	Mus_spretus
ENSCSEG00000019700	cherp	78	67.374	ENSMPUG00000016023	CHERP	78	67.280	Mustela_putorius_furo
ENSCSEG00000019700	cherp	79	61.438	ENSMLUG00000013881	CHERP	80	61.761	Myotis_lucifugus
ENSCSEG00000019700	cherp	79	64.744	ENSNGAG00000023323	Cherp	81	66.021	Nannospalax_galili
ENSCSEG00000019700	cherp	100	78.908	ENSNBRG00000001914	cherp	82	82.703	Neolamprologus_brichardi
ENSCSEG00000019700	cherp	99	59.202	ENSNLEG00000005536	CHERP	80	67.237	Nomascus_leucogenys
ENSCSEG00000019700	cherp	71	77.055	ENSMEUG00000010840	CHERP	71	76.027	Notamacropus_eugenii
ENSCSEG00000019700	cherp	78	67.383	ENSODEG00000001528	CHERP	81	67.560	Octodon_degus
ENSCSEG00000019700	cherp	100	84.137	ENSONIG00000007686	cherp	80	84.595	Oreochromis_niloticus
ENSCSEG00000019700	cherp	100	82.220	ENSORLG00000000138	cherp	79	82.033	Oryzias_latipes
ENSCSEG00000019700	cherp	100	82.106	ENSORLG00020013142	cherp	92	80.056	Oryzias_latipes_hni
ENSCSEG00000019700	cherp	100	81.880	ENSORLG00015008911	cherp	79	81.616	Oryzias_latipes_hsok
ENSCSEG00000019700	cherp	79	81.769	ENSOMEG00000016947	cherp	82	81.972	Oryzias_melastigma
ENSCSEG00000019700	cherp	79	65.879	ENSOGAG00000005834	CHERP	79	66.447	Otolemur_garnettii
ENSCSEG00000019700	cherp	78	59.358	ENSOARG00000018876	CHERP	79	58.699	Ovis_aries
ENSCSEG00000019700	cherp	79	65.504	ENSPPAG00000029195	CHERP	80	65.674	Pan_paniscus
ENSCSEG00000019700	cherp	78	66.057	ENSPPRG00000003275	CHERP	81	65.718	Panthera_pardus
ENSCSEG00000019700	cherp	98	54.486	ENSPTIG00000019778	CHERP	86	54.356	Panthera_tigris_altaica
ENSCSEG00000019700	cherp	79	66.579	ENSPTRG00000010647	CHERP	80	67.280	Pan_troglodytes
ENSCSEG00000019700	cherp	79	65.589	ENSPANG00000011698	CHERP	80	65.759	Papio_anubis
ENSCSEG00000019700	cherp	77	67.078	ENSPKIG00000000423	cherp	80	67.253	Paramormyrops_kingsleyae
ENSCSEG00000019700	cherp	78	68.280	ENSPSIG00000011974	CHERP	79	67.957	Pelodiscus_sinensis
ENSCSEG00000019700	cherp	87	92.857	ENSPMGG00000023606	cherp	89	96.250	Periophthalmus_magnuspinnatus
ENSCSEG00000019700	cherp	79	64.368	ENSPEMG00000011238	Cherp	80	64.994	Peromyscus_maniculatus_bairdii
ENSCSEG00000019700	cherp	99	82.171	ENSPFOG00000016899	cherp	98	82.464	Poecilia_formosa
ENSCSEG00000019700	cherp	89	80.691	ENSPMEG00000002214	cherp	76	84.122	Poecilia_mexicana
ENSCSEG00000019700	cherp	99	82.838	ENSPREG00000020774	cherp	98	83.019	Poecilia_reticulata
ENSCSEG00000019700	cherp	79	65.119	ENSPPYG00000009691	CHERP	79	65.650	Pongo_abelii
ENSCSEG00000019700	cherp	87	87.342	ENSPCAG00000001337	CHERP	89	87.342	Procavia_capensis
ENSCSEG00000019700	cherp	59	91.429	ENSPCOG00000022788	CHERP	66	88.060	Propithecus_coquereli
ENSCSEG00000019700	cherp	87	86.250	ENSPVAG00000004320	CHERP	89	87.342	Pteropus_vampyrus
ENSCSEG00000019700	cherp	100	84.673	ENSPNYG00000003942	cherp	80	85.000	Pundamilia_nyererei
ENSCSEG00000019700	cherp	100	72.303	ENSPNAG00000017179	cherp	80	74.835	Pygocentrus_nattereri
ENSCSEG00000019700	cherp	79	65.026	ENSRNOG00000012323	Cherp	79	66.449	Rattus_norvegicus
ENSCSEG00000019700	cherp	79	66.667	ENSRBIG00000038621	CHERP	84	65.759	Rhinopithecus_bieti
ENSCSEG00000019700	cherp	79	65.589	ENSRROG00000040770	CHERP	84	65.759	Rhinopithecus_roxellana
ENSCSEG00000019700	cherp	99	60.312	ENSSBOG00000014492	CHERP	80	65.544	Saimiri_boliviensis_boliviensis
ENSCSEG00000019700	cherp	87	81.928	ENSSFOG00015008022	cherp	93	74.719	Scleropages_formosus
ENSCSEG00000019700	cherp	100	84.797	ENSSMAG00000005362	cherp	100	85.011	Scophthalmus_maximus
ENSCSEG00000019700	cherp	100	84.454	ENSSDUG00000019712	cherp	80	84.853	Seriola_dumerili
ENSCSEG00000019700	cherp	100	85.169	ENSSLDG00000012659	cherp	80	85.619	Seriola_lalandi_dorsalis
ENSCSEG00000019700	cherp	78	69.083	ENSSPUG00000008901	CHERP	79	67.075	Sphenodon_punctatus
ENSCSEG00000019700	cherp	100	84.368	ENSSPAG00000010681	cherp	80	85.425	Stegastes_partitus
ENSCSEG00000019700	cherp	78	67.331	ENSSSCG00000013860	CHERP	80	67.411	Sus_scrofa
ENSCSEG00000019700	cherp	79	66.403	ENSTGUG00000000680	CHERP	80	66.622	Taeniopygia_guttata
ENSCSEG00000019700	cherp	100	77.754	ENSTRUG00000007429	cherp	99	78.004	Takifugu_rubripes
ENSCSEG00000019700	cherp	99	78.767	ENSTNIG00000003363	cherp	80	82.108	Tetraodon_nigroviridis
ENSCSEG00000019700	cherp	67	67.188	ENSTTRG00000015006	CHERP	70	67.188	Tursiops_truncatus
ENSCSEG00000019700	cherp	99	56.458	ENSUAMG00000017295	CHERP	80	65.943	Ursus_americanus
ENSCSEG00000019700	cherp	64	70.066	ENSUMAG00000000965	CHERP	74	69.737	Ursus_maritimus
ENSCSEG00000019700	cherp	78	65.803	ENSVVUG00000016546	CHERP	81	65.589	Vulpes_vulpes