EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000019769 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3388 bases
Position: chr1:23042003-23045390
Accession: 103385815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030883	RRM_1	PF00076.22	4.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031290	-	882	XM_008319811	ENSCSEP00000030883	293 (aa)	XP_008318033	-

Gene Model

Click here to download ENSCSEG00000019769's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000019769	-	74	74.208	ENSCSEG00000021349	-	70	76.471
ENSCSEG00000019769	-	69	53.394	ENSCSEG00000014237	-	73	52.727

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019769	-	71	56.744	ENSG00000184672	RALYL	92	76.923	Homo_sapiens
ENSCSEG00000019769	-	72	80.282	ENSAPOG00000006963	hnrnpc	96	67.785	Acanthochromis_polyacanthus
ENSCSEG00000019769	-	77	79.295	ENSACIG00000000270	-	83	81.651	Amphilophus_citrinellus
ENSCSEG00000019769	-	74	75.000	ENSACIG00000016568	-	99	63.051	Amphilophus_citrinellus
ENSCSEG00000019769	-	80	71.074	ENSAOCG00000021616	-	76	75.877	Amphiprion_ocellaris
ENSCSEG00000019769	-	72	80.282	ENSAOCG00000003896	-	70	81.567	Amphiprion_ocellaris
ENSCSEG00000019769	-	72	80.282	ENSAPEG00000001489	-	70	81.567	Amphiprion_percula
ENSCSEG00000019769	-	74	75.000	ENSAPEG00000019962	-	74	77.273	Amphiprion_percula
ENSCSEG00000019769	-	75	75.446	ENSATEG00000018006	-	81	77.679	Anabas_testudineus
ENSCSEG00000019769	-	75	80.909	ENSATEG00000011734	-	74	82.727	Anabas_testudineus
ENSCSEG00000019769	-	71	51.739	ENSAPLG00000015574	RALYL	75	51.556	Anas_platyrhynchos
ENSCSEG00000019769	-	71	50.870	ENSACAG00000028464	RALYL	74	52.000	Anolis_carolinensis
ENSCSEG00000019769	-	71	56.744	ENSANAG00000023383	RALYL	73	53.991	Aotus_nancymaae
ENSCSEG00000019769	-	74	77.578	ENSACLG00000000995	-	82	74.888	Astatotilapia_calliptera
ENSCSEG00000019769	-	74	73.874	ENSACLG00000005707	-	75	76.233	Astatotilapia_calliptera
ENSCSEG00000019769	-	70	81.250	ENSACLG00000013636	-	72	80.275	Astatotilapia_calliptera
ENSCSEG00000019769	-	74	78.241	ENSAMXG00000034915	zgc:55733	77	76.389	Astyanax_mexicanus
ENSCSEG00000019769	-	65	69.948	ENSAMXG00000042946	hnrnpc	98	64.433	Astyanax_mexicanus
ENSCSEG00000019769	-	71	56.542	ENSCJAG00000000402	RALYL	73	54.930	Callithrix_jacchus
ENSCSEG00000019769	-	71	51.092	ENSCPOG00000012314	RALYL	74	51.786	Cavia_porcellus
ENSCSEG00000019769	-	71	56.744	ENSCCAG00000025003	RALYL	76	76.923	Cebus_capucinus
ENSCSEG00000019769	-	71	56.744	ENSCATG00000042145	RALYL	73	54.460	Cercocebus_atys
ENSCSEG00000019769	-	71	51.092	ENSCLAG00000005228	RALYL	74	51.786	Chinchilla_lanigera
ENSCSEG00000019769	-	71	49.780	ENSCHOG00000013228	RALYL	74	48.684	Choloepus_hoffmanni
ENSCSEG00000019769	-	71	56.744	ENSCANG00000039144	RALYL	73	54.460	Colobus_angolensis_palliatus
ENSCSEG00000019769	-	71	50.870	ENSCGRG00001009241	Ralyl	74	51.556	Cricetulus_griseus_chok1gshd
ENSCSEG00000019769	-	73	66.359	ENSCVAG00000002797	-	72	65.438	Cyprinodon_variegatus
ENSCSEG00000019769	-	74	76.923	ENSCVAG00000016981	-	68	76.444	Cyprinodon_variegatus
ENSCSEG00000019769	-	75	72.000	ENSDARG00000053810	hnrnpc	71	71.556	Danio_rerio
ENSCSEG00000019769	-	74	78.704	ENSDARG00000103845	zgc:55733	81	76.852	Danio_rerio
ENSCSEG00000019769	-	71	50.870	ENSDORG00000003721	Ralyl	74	51.556	Dipodomys_ordii
ENSCSEG00000019769	-	55	54.598	ENSETEG00000014028	RALYL	82	55.152	Echinops_telfairi
ENSCSEG00000019769	-	76	46.444	ENSEBUG00000012363	hnrnpc	67	46.888	Eptatretus_burgeri
ENSCSEG00000019769	-	72	47.642	ENSEBUG00000006049	RALYL	74	46.919	Eptatretus_burgeri
ENSCSEG00000019769	-	71	50.435	ENSEEUG00000007202	RALYL	76	51.339	Erinaceus_europaeus
ENSCSEG00000019769	-	80	68.354	ENSELUG00000007714	-	99	61.092	Esox_lucius
ENSCSEG00000019769	-	73	75.926	ENSELUG00000004132	-	75	73.874	Esox_lucius
ENSCSEG00000019769	-	71	56.279	ENSFALG00000008647	RALYL	95	55.140	Ficedula_albicollis
ENSCSEG00000019769	-	72	74.766	ENSFHEG00000003605	-	71	75.688	Fundulus_heteroclitus
ENSCSEG00000019769	-	75	71.967	ENSFHEG00000007278	-	72	71.130	Fundulus_heteroclitus
ENSCSEG00000019769	-	71	55.349	ENSGALG00000036938	RALYL	74	51.111	Gallus_gallus
ENSCSEG00000019769	-	80	70.954	ENSGAFG00000020992	-	99	64.286	Gambusia_affinis
ENSCSEG00000019769	-	74	75.909	ENSGAFG00000020486	-	100	62.162	Gambusia_affinis
ENSCSEG00000019769	-	74	65.766	ENSGACG00000018932	-	87	63.470	Gasterosteus_aculeatus
ENSCSEG00000019769	-	74	76.577	ENSGACG00000017772	-	85	76.126	Gasterosteus_aculeatus
ENSCSEG00000019769	-	71	56.744	ENSGGOG00000000841	RALYL	73	54.460	Gorilla_gorilla
ENSCSEG00000019769	-	70	81.731	ENSHBUG00000018342	-	70	80.734	Haplochromis_burtoni
ENSCSEG00000019769	-	74	74.324	ENSHBUG00000010527	-	70	75.771	Haplochromis_burtoni
ENSCSEG00000019769	-	71	50.655	ENSHGLG00000004866	RALYL	74	51.339	Heterocephalus_glaber_female
ENSCSEG00000019769	-	71	50.655	ENSHGLG00100017480	RALYL	74	51.339	Heterocephalus_glaber_male
ENSCSEG00000019769	-	73	73.043	ENSHCOG00000012333	hnrnpc	74	70.870	Hippocampus_comes
ENSCSEG00000019769	-	75	76.471	ENSIPUG00000008666	zgc:55733	95	72.350	Ictalurus_punctatus
ENSCSEG00000019769	-	73	73.272	ENSIPUG00000011271	hnrnpc	98	71.491	Ictalurus_punctatus
ENSCSEG00000019769	-	71	50.870	ENSSTOG00000012583	RALYL	76	51.111	Ictidomys_tridecemlineatus
ENSCSEG00000019769	-	72	81.517	ENSKMAG00000011170	-	70	81.567	Kryptolebias_marmoratus
ENSCSEG00000019769	-	74	75.455	ENSKMAG00000018265	-	69	77.679	Kryptolebias_marmoratus
ENSCSEG00000019769	-	74	73.543	ENSLBEG00000024418	-	74	72.646	Labrus_bergylta
ENSCSEG00000019769	-	72	78.873	ENSLBEG00000006979	-	73	78.873	Labrus_bergylta
ENSCSEG00000019769	-	75	74.554	ENSLBEG00000006193	-	70	75.446	Labrus_bergylta
ENSCSEG00000019769	-	72	65.899	ENSLOCG00000002560	hnrnpc	77	65.198	Lepisosteus_oculatus
ENSCSEG00000019769	-	71	56.744	ENSMNEG00000033288	RALYL	73	54.460	Macaca_nemestrina
ENSCSEG00000019769	-	71	56.744	ENSMLEG00000038284	RALYL	73	54.460	Mandrillus_leucophaeus
ENSCSEG00000019769	-	72	82.629	ENSMAMG00000012236	-	74	80.093	Mastacembelus_armatus
ENSCSEG00000019769	-	75	74.107	ENSMAMG00000008033	-	77	76.339	Mastacembelus_armatus
ENSCSEG00000019769	-	74	73.874	ENSMZEG00005024249	-	70	76.233	Maylandia_zebra
ENSCSEG00000019769	-	70	81.250	ENSMZEG00005020460	-	80	73.043	Maylandia_zebra
ENSCSEG00000019769	-	71	50.870	ENSMAUG00000015149	Ralyl	74	51.556	Mesocricetus_auratus
ENSCSEG00000019769	-	71	55.349	ENSMICG00000005558	RALYL	79	75.641	Microcebus_murinus
ENSCSEG00000019769	-	71	50.870	ENSMOCG00000017371	Ralyl	74	51.556	Microtus_ochrogaster
ENSCSEG00000019769	-	74	80.275	ENSMMOG00000021465	-	75	79.358	Mola_mola
ENSCSEG00000019769	-	73	75.576	ENSMMOG00000019520	-	99	63.699	Mola_mola
ENSCSEG00000019769	-	74	77.523	ENSMALG00000014623	-	68	77.064	Monopterus_albus
ENSCSEG00000019769	-	72	74.882	ENSMALG00000007520	-	75	74.194	Monopterus_albus
ENSCSEG00000019769	-	71	51.304	ENSMUSG00000039717	Ralyl	92	78.205	Mus_musculus
ENSCSEG00000019769	-	71	51.542	ENSMPUG00000010724	RALYL	74	50.222	Mustela_putorius_furo
ENSCSEG00000019769	-	71	51.304	ENSNGAG00000013375	Ralyl	74	51.556	Nannospalax_galili
ENSCSEG00000019769	-	72	81.132	ENSNBRG00000004912	-	94	71.491	Neolamprologus_brichardi
ENSCSEG00000019769	-	99	62.245	ENSNBRG00000015676	-	96	63.605	Neolamprologus_brichardi
ENSCSEG00000019769	-	71	56.744	ENSNLEG00000002702	RALYL	70	54.460	Nomascus_leucogenys
ENSCSEG00000019769	-	60	47.938	ENSOPRG00000013650	-	97	46.667	Ochotona_princeps
ENSCSEG00000019769	-	71	52.609	ENSODEG00000001012	RALYL	74	51.786	Octodon_degus
ENSCSEG00000019769	-	74	74.324	ENSONIG00000018350	-	70	75.771	Oreochromis_niloticus
ENSCSEG00000019769	-	70	82.212	ENSONIG00000007859	-	77	77.974	Oreochromis_niloticus
ENSCSEG00000019769	-	74	71.930	ENSORLG00000003144	-	69	74.138	Oryzias_latipes
ENSCSEG00000019769	-	70	73.913	ENSORLG00000009999	-	68	73.460	Oryzias_latipes
ENSCSEG00000019769	-	70	73.913	ENSORLG00020018228	hnrnpc	68	73.460	Oryzias_latipes_hni
ENSCSEG00000019769	-	70	73.913	ENSORLG00015019755	-	68	73.460	Oryzias_latipes_hsok
ENSCSEG00000019769	-	74	71.930	ENSORLG00015009460	-	69	74.138	Oryzias_latipes_hsok
ENSCSEG00000019769	-	70	75.362	ENSOMEG00000020488	-	68	74.882	Oryzias_melastigma
ENSCSEG00000019769	-	74	75.566	ENSOMEG00000022665	-	70	77.778	Oryzias_melastigma
ENSCSEG00000019769	-	71	56.744	ENSPPAG00000038705	RALYL	73	54.460	Pan_paniscus
ENSCSEG00000019769	-	71	55.300	ENSPPRG00000018612	RALYL	73	53.953	Panthera_pardus
ENSCSEG00000019769	-	71	55.300	ENSPTIG00000020331	RALYL	73	53.953	Panthera_tigris_altaica
ENSCSEG00000019769	-	71	56.744	ENSPTRG00000020381	RALYL	73	54.460	Pan_troglodytes
ENSCSEG00000019769	-	71	56.744	ENSPANG00000029305	RALYL	73	54.460	Papio_anubis
ENSCSEG00000019769	-	73	75.342	ENSPKIG00000022837	-	70	73.661	Paramormyrops_kingsleyae
ENSCSEG00000019769	-	75	73.128	ENSPKIG00000008592	-	70	73.128	Paramormyrops_kingsleyae
ENSCSEG00000019769	-	71	51.739	ENSPSIG00000011135	RALYL	74	52.232	Pelodiscus_sinensis
ENSCSEG00000019769	-	100	65.306	ENSPMGG00000013144	-	100	64.966	Periophthalmus_magnuspinnatus
ENSCSEG00000019769	-	73	74.537	ENSPMGG00000017774	-	88	62.963	Periophthalmus_magnuspinnatus
ENSCSEG00000019769	-	71	51.304	ENSPEMG00000016447	Ralyl	74	51.556	Peromyscus_maniculatus_bairdii
ENSCSEG00000019769	-	71	54.386	ENSPMAG00000002407	RALYL	96	52.193	Petromyzon_marinus
ENSCSEG00000019769	-	70	79.426	ENSPFOG00000001583	-	71	78.995	Poecilia_formosa
ENSCSEG00000019769	-	74	74.545	ENSPFOG00000002643	-	69	76.786	Poecilia_formosa
ENSCSEG00000019769	-	74	74.545	ENSPLAG00000000061	-	69	76.786	Poecilia_latipinna
ENSCSEG00000019769	-	70	78.846	ENSPLAG00000015305	-	71	78.440	Poecilia_latipinna
ENSCSEG00000019769	-	74	74.091	ENSPMEG00000016524	-	69	76.339	Poecilia_mexicana
ENSCSEG00000019769	-	70	80.769	ENSPMEG00000004802	-	71	79.817	Poecilia_mexicana
ENSCSEG00000019769	-	74	73.636	ENSPREG00000001852	-	74	75.893	Poecilia_reticulata
ENSCSEG00000019769	-	70	77.885	ENSPREG00000007928	-	71	77.064	Poecilia_reticulata
ENSCSEG00000019769	-	71	51.965	ENSPVAG00000010821	RALYL	74	52.679	Pteropus_vampyrus
ENSCSEG00000019769	-	72	79.717	ENSPNYG00000020293	-	85	71.493	Pundamilia_nyererei
ENSCSEG00000019769	-	99	63.605	ENSPNYG00000003747	-	96	63.973	Pundamilia_nyererei
ENSCSEG00000019769	-	74	74.312	ENSPNAG00000015686	hnrnpc	74	74.771	Pygocentrus_nattereri
ENSCSEG00000019769	-	74	69.778	ENSPNAG00000019200	zgc:55733	73	68.750	Pygocentrus_nattereri
ENSCSEG00000019769	-	71	56.744	ENSRROG00000023925	RALYL	81	75.000	Rhinopithecus_roxellana
ENSCSEG00000019769	-	90	62.921	ENSSFOG00015012015	-	83	74.886	Scleropages_formosus
ENSCSEG00000019769	-	73	75.113	ENSSFOG00015012924	-	79	89.744	Scleropages_formosus
ENSCSEG00000019769	-	73	73.973	ENSSMAG00000011147	-	79	76.256	Scophthalmus_maximus
ENSCSEG00000019769	-	72	77.465	ENSSMAG00000013592	-	69	77.419	Scophthalmus_maximus
ENSCSEG00000019769	-	75	76.233	ENSSDUG00000006730	-	70	78.475	Seriola_dumerili
ENSCSEG00000019769	-	72	82.160	ENSSDUG00000001723	-	70	82.488	Seriola_dumerili
ENSCSEG00000019769	-	75	76.233	ENSSLDG00000007474	-	77	78.475	Seriola_lalandi_dorsalis
ENSCSEG00000019769	-	72	81.690	ENSSLDG00000007454	-	71	82.028	Seriola_lalandi_dorsalis
ENSCSEG00000019769	-	72	80.282	ENSSPAG00000023204	-	70	82.028	Stegastes_partitus
ENSCSEG00000019769	-	75	75.446	ENSSPAG00000013996	-	70	77.679	Stegastes_partitus
ENSCSEG00000019769	-	77	48.617	ENSTGUG00000011689	RALYL	76	51.556	Taeniopygia_guttata
ENSCSEG00000019769	-	74	78.539	ENSTRUG00000020158	-	72	79.091	Takifugu_rubripes
ENSCSEG00000019769	-	73	73.611	ENSTNIG00000000334	-	79	71.493	Tetraodon_nigroviridis
ENSCSEG00000019769	-	71	70.089	ENSTNIG00000007427	-	73	71.053	Tetraodon_nigroviridis
ENSCSEG00000019769	-	71	45.614	ENSTBEG00000005551	RALYL	85	44.144	Tupaia_belangeri
ENSCSEG00000019769	-	71	47.826	ENSTTRG00000015762	RALYL	74	50.000	Tursiops_truncatus
ENSCSEG00000019769	-	71	49.302	ENSVPAG00000008501	RALYL	74	46.429	Vicugna_pacos
ENSCSEG00000019769	-	71	71.090	ENSXCOG00000006552	-	69	69.124	Xiphophorus_couchianus
ENSCSEG00000019769	-	54	80.723	ENSXCOG00000019434	-	69	80.120	Xiphophorus_couchianus
ENSCSEG00000019769	-	74	75.000	ENSXMAG00000022849	-	72	76.786	Xiphophorus_maculatus
ENSCSEG00000019769	-	72	77.358	ENSXMAG00000009333	-	70	76.389	Xiphophorus_maculatus