EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000019778 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6 (1 of many)
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 2619 bases
Position: chr10:1986493-1989111
Accession: 10788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000030885	RRM_1	PF00076.22	8.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031293	SRSF6 (1 of many)-201	402	-	ENSCSEP00000030885	133 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000019778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000019778	SRSF6	89	39.855	ENSCSEG00000009973	-	53	42.754
ENSCSEG00000019778	SRSF6	55	44.737	ENSCSEG00000006378	srsf7a	54	44.737
ENSCSEG00000019778	SRSF6	62	32.530	ENSCSEG00000007739	-	52	34.722
ENSCSEG00000019778	SRSF6	57	41.772	ENSCSEG00000001311	-	62	42.308
ENSCSEG00000019778	SRSF6	70	39.583	ENSCSEG00000002271	srsf3b	80	40.000
ENSCSEG00000019778	SRSF6	90	72.868	ENSCSEG00000010058	srsf4	76	76.230
ENSCSEG00000019778	SRSF6	89	48.000	ENSCSEG00000014272	-	50	48.800
ENSCSEG00000019778	SRSF6	89	41.600	ENSCSEG00000015663	srsf9	51	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019778	SRSF6	90	84.252	ENSG00000124193	SRSF6	58	93.590	Homo_sapiens
ENSCSEG00000019778	SRSF6	96	82.979	ENSAPOG00000016635	-	85	78.102	Acanthochromis_polyacanthus
ENSCSEG00000019778	SRSF6	90	82.927	ENSACIG00000020091	-	95	77.953	Amphilophus_citrinellus
ENSCSEG00000019778	SRSF6	59	97.436	ENSAOCG00000019438	-	68	97.436	Amphiprion_ocellaris
ENSCSEG00000019778	SRSF6	90	84.252	ENSANAG00000024080	SRSF6	58	93.590	Aotus_nancymaae
ENSCSEG00000019778	SRSF6	55	91.781	ENSACLG00000024373	-	80	92.105	Astatotilapia_calliptera
ENSCSEG00000019778	SRSF6	92	77.372	ENSAMXG00000042692	-	98	77.372	Astyanax_mexicanus
ENSCSEG00000019778	SRSF6	90	84.252	ENSBTAG00000008527	SRSF6	58	94.872	Bos_taurus
ENSCSEG00000019778	SRSF6	90	84.252	ENSCJAG00000048403	SRSF6	58	93.590	Callithrix_jacchus
ENSCSEG00000019778	SRSF6	90	84.252	ENSCAFG00000009289	SRSF6	58	94.872	Canis_familiaris
ENSCSEG00000019778	SRSF6	90	84.252	ENSCAFG00020013559	SRSF6	58	94.872	Canis_lupus_dingo
ENSCSEG00000019778	SRSF6	90	84.252	ENSCHIG00000015890	-	58	94.872	Capra_hircus
ENSCSEG00000019778	SRSF6	90	84.252	ENSCPOG00000011761	SRSF6	58	93.590	Cavia_porcellus
ENSCSEG00000019778	SRSF6	90	84.252	ENSCCAG00000026018	-	58	93.590	Cebus_capucinus
ENSCSEG00000019778	SRSF6	90	84.252	ENSCATG00000030794	SRSF6	58	93.590	Cercocebus_atys
ENSCSEG00000019778	SRSF6	90	84.252	ENSCLAG00000010247	SRSF6	58	93.590	Chinchilla_lanigera
ENSCSEG00000019778	SRSF6	90	84.252	ENSCGRG00001022339	Srsf6	58	93.590	Cricetulus_griseus_chok1gshd
ENSCSEG00000019778	SRSF6	91	86.290	ENSCVAG00000001863	SRSF6	95	90.323	Cyprinodon_variegatus
ENSCSEG00000019778	SRSF6	90	76.336	ENSDARG00000016783	srsf6b	82	96.154	Danio_rerio
ENSCSEG00000019778	SRSF6	90	84.252	ENSDORG00000028378	Srsf6	58	93.590	Dipodomys_ordii
ENSCSEG00000019778	SRSF6	90	86.400	ENSELUG00000013506	SRSF6	70	94.872	Esox_lucius
ENSCSEG00000019778	SRSF6	99	73.684	ENSELUG00000024182	SRSF6	99	71.141	Esox_lucius
ENSCSEG00000019778	SRSF6	90	79.389	ENSGALG00000000990	SRSF6	58	93.590	Gallus_gallus
ENSCSEG00000019778	SRSF6	87	79.365	ENSGAFG00000019088	-	72	80.000	Gambusia_affinis
ENSCSEG00000019778	SRSF6	90	84.252	ENSGGOG00000009808	SRSF6	58	93.590	Gorilla_gorilla
ENSCSEG00000019778	SRSF6	90	84.252	ENSHGLG00000007348	SRSF6	58	93.590	Heterocephalus_glaber_female
ENSCSEG00000019778	SRSF6	90	84.252	ENSSTOG00000010866	SRSF6	58	93.590	Ictidomys_tridecemlineatus
ENSCSEG00000019778	SRSF6	90	84.252	ENSMFAG00000036925	SRSF6	58	93.590	Macaca_fascicularis
ENSCSEG00000019778	SRSF6	90	84.252	ENSMMUG00000006742	SRSF6	58	93.590	Macaca_mulatta
ENSCSEG00000019778	SRSF6	90	83.465	ENSMNEG00000027392	-	58	92.308	Macaca_nemestrina
ENSCSEG00000019778	SRSF6	69	84.783	ENSMAMG00000023477	-	82	93.421	Mastacembelus_armatus
ENSCSEG00000019778	SRSF6	67	87.640	ENSMAUG00000019086	-	58	93.590	Mesocricetus_auratus
ENSCSEG00000019778	SRSF6	90	84.252	ENSMICG00000008537	SRSF6	58	93.590	Microcebus_murinus
ENSCSEG00000019778	SRSF6	59	98.718	ENSMMOG00000015241	-	73	98.718	Mola_mola
ENSCSEG00000019778	SRSF6	90	84.252	MGP_CAROLIEiJ_G0024606	Srsf6	58	93.590	Mus_caroli
ENSCSEG00000019778	SRSF6	90	84.252	ENSMUSG00000016921	Srsf6	58	93.590	Mus_musculus
ENSCSEG00000019778	SRSF6	90	84.252	MGP_PahariEiJ_G0026050	Srsf6	58	93.590	Mus_pahari
ENSCSEG00000019778	SRSF6	90	84.252	MGP_SPRETEiJ_G0025528	Srsf6	58	93.590	Mus_spretus
ENSCSEG00000019778	SRSF6	90	84.252	ENSNGAG00000017560	Srsf6	58	93.590	Nannospalax_galili
ENSCSEG00000019778	SRSF6	90	84.252	ENSNLEG00000006524	SRSF6	58	93.590	Nomascus_leucogenys
ENSCSEG00000019778	SRSF6	67	87.640	ENSODEG00000016510	-	58	93.590	Octodon_degus
ENSCSEG00000019778	SRSF6	88	90.000	ENSORLG00020017506	srsf6a	74	90.833	Oryzias_latipes_hni
ENSCSEG00000019778	SRSF6	90	84.252	ENSPTRG00000044686	-	58	93.590	Pan_troglodytes
ENSCSEG00000019778	SRSF6	90	84.252	ENSPANG00000035224	SRSF6	58	93.590	Papio_anubis
ENSCSEG00000019778	SRSF6	90	89.256	ENSPKIG00000018463	-	77	94.872	Paramormyrops_kingsleyae
ENSCSEG00000019778	SRSF6	92	88.000	ENSPKIG00000015603	-	89	88.000	Paramormyrops_kingsleyae
ENSCSEG00000019778	SRSF6	88	75.214	ENSPKIG00000015703	-	97	66.400	Paramormyrops_kingsleyae
ENSCSEG00000019778	SRSF6	90	81.250	ENSPCIG00000003820	SRSF6	58	93.590	Phascolarctos_cinereus
ENSCSEG00000019778	SRSF6	90	80.769	ENSPLAG00000009243	srsf6a	80	79.528	Poecilia_latipinna
ENSCSEG00000019778	SRSF6	92	80.303	ENSPREG00000001040	srsf6a	89	79.699	Poecilia_reticulata
ENSCSEG00000019778	SRSF6	90	84.252	ENSPCOG00000026364	SRSF6	58	93.590	Propithecus_coquereli
ENSCSEG00000019778	SRSF6	92	87.200	ENSPNAG00000023179	-	95	85.484	Pygocentrus_nattereri
ENSCSEG00000019778	SRSF6	90	87.705	ENSRBIG00000041414	SRSF6	60	93.590	Rhinopithecus_bieti
ENSCSEG00000019778	SRSF6	90	84.252	ENSRROG00000029989	SRSF6	58	93.590	Rhinopithecus_roxellana
ENSCSEG00000019778	SRSF6	90	84.252	ENSSBOG00000033708	-	58	93.590	Saimiri_boliviensis_boliviensis
ENSCSEG00000019778	SRSF6	60	96.250	ENSSMAG00000014861	-	98	68.182	Scophthalmus_maximus
ENSCSEG00000019778	SRSF6	69	84.783	ENSSDUG00000011036	-	83	93.421	Seriola_dumerili
ENSCSEG00000019778	SRSF6	69	84.783	ENSSLDG00000014858	-	83	93.421	Seriola_lalandi_dorsalis
ENSCSEG00000019778	SRSF6	90	82.400	ENSSPUG00000004967	SRSF6	58	93.590	Sphenodon_punctatus
ENSCSEG00000019778	SRSF6	69	83.696	ENSSPAG00000021913	-	79	92.105	Stegastes_partitus
ENSCSEG00000019778	SRSF6	60	98.750	ENSTRUG00000021397	-	87	98.750	Takifugu_rubripes
ENSCSEG00000019778	SRSF6	90	84.252	ENSUAMG00000003559	SRSF6	58	94.872	Ursus_americanus
ENSCSEG00000019778	SRSF6	67	58.427	ENSVVUG00000019276	-	55	60.256	Vulpes_vulpes