EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000019848 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5805 bases
Position: chr13:1998720-2004524
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000031010	zf-C2H2	PF00096.26	2.5e-30	1	4
ENSCSEP00000031010	zf-C2H2	PF00096.26	2.5e-30	2	4
ENSCSEP00000031010	zf-C2H2	PF00096.26	2.5e-30	3	4
ENSCSEP00000031010	zf-C2H2	PF00096.26	2.5e-30	4	4
ENSCSEP00000031010	zf-met	PF12874.7	6.1e-09	1	3
ENSCSEP00000031010	zf-met	PF12874.7	6.1e-09	2	3
ENSCSEP00000031010	zf-met	PF12874.7	6.1e-09	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031417	-	918	-	ENSCSEP00000031010	305 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000019848's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019848's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000019848	-	54	44.118	ENSCSEG00000008510	-	50	44.118
ENSCSEG00000019848	-	55	40.136	ENSCSEG00000018829	-	70	40.659
ENSCSEG00000019848	-	70	36.567	ENSCSEG00000008596	scrt1b	68	36.567
ENSCSEG00000019848	-	80	40.441	ENSCSEG00000004210	-	96	46.951
ENSCSEG00000019848	-	52	50.000	ENSCSEG00000015593	-	77	50.000
ENSCSEG00000019848	-	54	36.517	ENSCSEG00000011395	zbtb41	53	36.517
ENSCSEG00000019848	-	81	37.975	ENSCSEG00000005974	-	94	36.893
ENSCSEG00000019848	-	56	34.722	ENSCSEG00000012389	znf646	56	34.722
ENSCSEG00000019848	-	55	46.939	ENSCSEG00000018535	-	93	46.939
ENSCSEG00000019848	-	55	36.986	ENSCSEG00000003536	znf341	55	36.986
ENSCSEG00000019848	-	73	42.073	ENSCSEG00000000356	znf648	98	42.073
ENSCSEG00000019848	-	59	42.636	ENSCSEG00000019047	-	79	40.237
ENSCSEG00000019848	-	51	39.474	ENSCSEG00000021022	-	57	39.474
ENSCSEG00000019848	-	57	40.120	ENSCSEG00000013879	znf319b	82	40.120
ENSCSEG00000019848	-	63	45.342	ENSCSEG00000010423	-	55	45.342
ENSCSEG00000019848	-	63	47.312	ENSCSEG00000020696	-	96	45.732
ENSCSEG00000019848	-	55	49.057	ENSCSEG00000008502	-	68	49.057
ENSCSEG00000019848	-	72	42.197	ENSCSEG00000019029	-	90	42.197
ENSCSEG00000019848	-	64	42.963	ENSCSEG00000001771	-	59	42.963
ENSCSEG00000019848	-	65	39.706	ENSCSEG00000004721	-	64	39.706
ENSCSEG00000019848	-	54	41.212	ENSCSEG00000001315	gfi1b	51	41.212
ENSCSEG00000019848	-	55	38.710	ENSCSEG00000019599	-	60	38.710
ENSCSEG00000019848	-	59	40.625	ENSCSEG00000007055	-	97	40.625
ENSCSEG00000019848	-	54	38.235	ENSCSEG00000005456	si:ch211-79k12.2	50	37.436
ENSCSEG00000019848	-	62	44.660	ENSCSEG00000018822	-	92	44.660
ENSCSEG00000019848	-	62	38.462	ENSCSEG00000014637	-	82	38.462
ENSCSEG00000019848	-	58	43.373	ENSCSEG00000008903	-	90	40.909
ENSCSEG00000019848	-	55	44.776	ENSCSEG00000005983	-	92	44.776
ENSCSEG00000019848	-	60	33.613	ENSCSEG00000018571	-	67	33.613
ENSCSEG00000019848	-	69	42.553	ENSCSEG00000010264	-	93	42.553
ENSCSEG00000019848	-	56	35.556	ENSCSEG00000010311	snai2	52	35.556
ENSCSEG00000019848	-	72	41.818	ENSCSEG00000005935	ZNF319	87	41.818
ENSCSEG00000019848	-	69	41.250	ENSCSEG00000020730	-	94	41.250
ENSCSEG00000019848	-	67	45.370	ENSCSEG00000010453	-	73	45.370
ENSCSEG00000019848	-	56	41.975	ENSCSEG00000008539	-	57	41.975
ENSCSEG00000019848	-	64	48.333	ENSCSEG00000001748	-	95	48.333
ENSCSEG00000019848	-	53	42.029	ENSCSEG00000010614	-	81	42.029
ENSCSEG00000019848	-	61	39.877	ENSCSEG00000015585	-	75	39.877
ENSCSEG00000019848	-	77	45.333	ENSCSEG00000011586	znf236	87	37.063
ENSCSEG00000019848	-	62	46.061	ENSCSEG00000013398	-	73	46.061
ENSCSEG00000019848	-	56	40.571	ENSCSEG00000009915	-	50	40.571
ENSCSEG00000019848	-	69	38.650	ENSCSEG00000019979	prdm5	64	38.650
ENSCSEG00000019848	-	57	40.659	ENSCSEG00000001168	-	73	34.167
ENSCSEG00000019848	-	68	43.713	ENSCSEG00000004273	-	77	43.713
ENSCSEG00000019848	-	61	46.471	ENSCSEG00000018497	-	50	46.471
ENSCSEG00000019848	-	57	42.683	ENSCSEG00000004348	-	79	41.250
ENSCSEG00000019848	-	57	40.323	ENSCSEG00000017606	zbtb47b	70	40.323
ENSCSEG00000019848	-	54	45.679	ENSCSEG00000003757	-	98	45.679
ENSCSEG00000019848	-	58	45.342	ENSCSEG00000018815	-	82	45.342
ENSCSEG00000019848	-	69	40.426	ENSCSEG00000004265	-	66	40.426
ENSCSEG00000019848	-	65	39.130	ENSCSEG00000005491	-	75	39.130

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019848	-	56	48.718	ENSAPOG00000009709	-	55	41.714	Acanthochromis_polyacanthus
ENSCSEG00000019848	-	57	43.810	ENSAPOG00000023008	-	60	42.331	Acanthochromis_polyacanthus
ENSCSEG00000019848	-	57	41.379	ENSAPOG00000004997	-	95	41.379	Acanthochromis_polyacanthus
ENSCSEG00000019848	-	54	43.636	ENSACIG00000007096	-	75	47.170	Amphilophus_citrinellus
ENSCSEG00000019848	-	64	41.026	ENSACIG00000022738	-	88	41.026	Amphilophus_citrinellus
ENSCSEG00000019848	-	53	38.182	ENSACIG00000006228	-	77	38.182	Amphilophus_citrinellus
ENSCSEG00000019848	-	64	43.810	ENSAOCG00000016409	-	59	42.331	Amphiprion_ocellaris
ENSCSEG00000019848	-	64	43.810	ENSAPEG00000008746	-	59	41.748	Amphiprion_percula
ENSCSEG00000019848	-	81	33.202	ENSAPEG00000009553	-	71	37.313	Amphiprion_percula
ENSCSEG00000019848	-	64	49.206	ENSAPEG00000006572	-	57	50.000	Amphiprion_percula
ENSCSEG00000019848	-	64	50.000	ENSATEG00000022064	-	91	50.000	Anabas_testudineus
ENSCSEG00000019848	-	66	41.739	ENSATEG00000014684	-	97	40.252	Anabas_testudineus
ENSCSEG00000019848	-	86	83.000	ENSATEG00000021056	-	88	83.000	Anabas_testudineus
ENSCSEG00000019848	-	64	43.558	ENSATEG00000015238	-	59	43.558	Anabas_testudineus
ENSCSEG00000019848	-	53	44.604	ENSATEG00000021602	-	65	44.604	Anabas_testudineus
ENSCSEG00000019848	-	55	41.250	ENSACLG00000019482	-	74	41.250	Astatotilapia_calliptera
ENSCSEG00000019848	-	66	41.935	ENSACLG00000001368	-	87	41.935	Astatotilapia_calliptera
ENSCSEG00000019848	-	60	40.854	ENSACLG00000022482	-	80	40.854	Astatotilapia_calliptera
ENSCSEG00000019848	-	82	37.736	ENSACLG00000013531	-	91	37.736	Astatotilapia_calliptera
ENSCSEG00000019848	-	55	48.148	ENSACLG00000020333	-	53	48.148	Astatotilapia_calliptera
ENSCSEG00000019848	-	63	43.590	ENSACLG00000014365	-	90	43.284	Astatotilapia_calliptera
ENSCSEG00000019848	-	55	48.148	ENSACLG00000006718	-	53	48.148	Astatotilapia_calliptera
ENSCSEG00000019848	-	57	42.029	ENSACLG00000015462	-	61	42.029	Astatotilapia_calliptera
ENSCSEG00000019848	-	81	42.771	ENSACLG00000019349	-	74	42.771	Astatotilapia_calliptera
ENSCSEG00000019848	-	62	45.217	ENSACLG00000008374	-	54	45.217	Astatotilapia_calliptera
ENSCSEG00000019848	-	52	41.463	ENSACLG00000011239	-	69	41.463	Astatotilapia_calliptera
ENSCSEG00000019848	-	81	36.364	ENSACLG00000005795	-	81	35.573	Astatotilapia_calliptera
ENSCSEG00000019848	-	73	38.926	ENSAMXG00000007973	-	94	39.759	Astyanax_mexicanus
ENSCSEG00000019848	-	54	43.243	ENSAMXG00000034934	-	72	35.714	Astyanax_mexicanus
ENSCSEG00000019848	-	54	43.558	ENSCVAG00000019097	-	61	43.558	Cyprinodon_variegatus
ENSCSEG00000019848	-	55	36.364	ENSCVAG00000020968	-	56	36.364	Cyprinodon_variegatus
ENSCSEG00000019848	-	54	39.362	ENSCVAG00000010887	-	56	39.362	Cyprinodon_variegatus
ENSCSEG00000019848	-	64	46.626	ENSELUG00000004677	-	60	46.626	Esox_lucius
ENSCSEG00000019848	-	65	42.945	ENSFHEG00000003460	-	66	42.945	Fundulus_heteroclitus
ENSCSEG00000019848	-	54	43.590	ENSFHEG00000004548	-	53	43.590	Fundulus_heteroclitus
ENSCSEG00000019848	-	57	37.356	ENSFHEG00000013228	-	56	37.356	Fundulus_heteroclitus
ENSCSEG00000019848	-	55	44.037	ENSGMOG00000017518	-	63	44.037	Gadus_morhua
ENSCSEG00000019848	-	53	44.785	ENSGMOG00000009187	ZNF626	74	44.785	Gadus_morhua
ENSCSEG00000019848	-	89	38.760	ENSGAFG00000018506	-	60	33.548	Gambusia_affinis
ENSCSEG00000019848	-	56	44.242	ENSGAFG00000001481	-	80	43.411	Gambusia_affinis
ENSCSEG00000019848	-	63	33.758	ENSGAFG00000007532	-	80	40.870	Gambusia_affinis
ENSCSEG00000019848	-	59	41.622	ENSGAGG00000015232	-	65	42.754	Gopherus_agassizii
ENSCSEG00000019848	-	57	42.029	ENSHBUG00000019377	-	61	42.029	Haplochromis_burtoni
ENSCSEG00000019848	-	62	45.217	ENSHBUG00000017924	-	54	45.217	Haplochromis_burtoni
ENSCSEG00000019848	-	55	45.349	ENSHBUG00000011944	-	77	37.097	Haplochromis_burtoni
ENSCSEG00000019848	-	56	40.625	ENSHBUG00000009274	-	87	40.230	Haplochromis_burtoni
ENSCSEG00000019848	-	59	39.306	ENSHBUG00000020527	-	85	39.306	Haplochromis_burtoni
ENSCSEG00000019848	-	81	35.606	ENSHBUG00000013065	-	73	35.573	Haplochromis_burtoni
ENSCSEG00000019848	-	52	39.706	ENSHBUG00000020544	-	89	39.706	Haplochromis_burtoni
ENSCSEG00000019848	-	55	41.379	ENSHBUG00000017251	-	99	41.379	Haplochromis_burtoni
ENSCSEG00000019848	-	79	40.566	ENSHCOG00000020309	-	77	37.857	Hippocampus_comes
ENSCSEG00000019848	-	53	46.626	ENSIPUG00000022266	ZNF135	60	46.626	Ictalurus_punctatus
ENSCSEG00000019848	-	64	43.558	ENSKMAG00000015304	-	60	43.558	Kryptolebias_marmoratus
ENSCSEG00000019848	-	90	86.813	ENSKMAG00000008200	-	71	73.333	Kryptolebias_marmoratus
ENSCSEG00000019848	-	53	41.463	ENSKMAG00000000802	-	77	41.463	Kryptolebias_marmoratus
ENSCSEG00000019848	-	54	44.444	ENSLBEG00000026457	-	92	37.500	Labrus_bergylta
ENSCSEG00000019848	-	53	46.341	ENSLBEG00000008909	-	68	46.341	Labrus_bergylta
ENSCSEG00000019848	-	57	43.158	ENSLBEG00000008850	-	50	43.158	Labrus_bergylta
ENSCSEG00000019848	-	54	43.269	ENSLOCG00000017422	-	69	43.269	Lepisosteus_oculatus
ENSCSEG00000019848	-	56	48.718	ENSMAMG00000002083	-	97	38.298	Mastacembelus_armatus
ENSCSEG00000019848	-	54	40.260	ENSMAMG00000015434	-	73	40.260	Mastacembelus_armatus
ENSCSEG00000019848	-	56	43.558	ENSMAMG00000010902	-	58	43.558	Mastacembelus_armatus
ENSCSEG00000019848	-	58	39.521	ENSMZEG00005022884	-	92	39.521	Maylandia_zebra
ENSCSEG00000019848	-	55	39.073	ENSMZEG00005003951	-	61	39.073	Maylandia_zebra
ENSCSEG00000019848	-	62	45.217	ENSMZEG00005011431	-	95	41.333	Maylandia_zebra
ENSCSEG00000019848	-	55	45.349	ENSMZEG00005025965	-	56	45.349	Maylandia_zebra
ENSCSEG00000019848	-	55	48.780	ENSMZEG00005023565	-	66	42.708	Maylandia_zebra
ENSCSEG00000019848	-	56	46.269	ENSMZEG00005028563	-	96	46.269	Maylandia_zebra
ENSCSEG00000019848	-	57	40.449	ENSMZEG00005025006	-	91	40.449	Maylandia_zebra
ENSCSEG00000019848	-	57	41.212	ENSMZEG00005027551	-	92	41.212	Maylandia_zebra
ENSCSEG00000019848	-	57	42.029	ENSMZEG00005018502	-	61	42.029	Maylandia_zebra
ENSCSEG00000019848	-	57	41.135	ENSMZEG00005012676	-	88	41.135	Maylandia_zebra
ENSCSEG00000019848	-	56	42.593	ENSMZEG00005025125	-	94	42.593	Maylandia_zebra
ENSCSEG00000019848	-	56	43.210	ENSMZEG00005020568	-	77	43.210	Maylandia_zebra
ENSCSEG00000019848	-	56	42.593	ENSMZEG00005025725	-	92	42.593	Maylandia_zebra
ENSCSEG00000019848	-	81	36.364	ENSMZEG00005011812	-	73	35.573	Maylandia_zebra
ENSCSEG00000019848	-	64	42.945	ENSMMOG00000009252	-	64	41.748	Mola_mola
ENSCSEG00000019848	-	84	39.623	ENSMMOG00000005437	-	76	39.623	Mola_mola
ENSCSEG00000019848	-	66	43.056	ENSMALG00000010959	-	96	43.056	Monopterus_albus
ENSCSEG00000019848	-	53	42.222	ENSMALG00000011756	-	59	40.361	Monopterus_albus
ENSCSEG00000019848	-	66	44.898	ENSMALG00000005696	-	55	46.087	Monopterus_albus
ENSCSEG00000019848	-	54	47.692	ENSMALG00000002956	-	84	47.692	Monopterus_albus
ENSCSEG00000019848	-	70	43.537	ENSNBRG00000019004	-	67	43.537	Neolamprologus_brichardi
ENSCSEG00000019848	-	80	43.011	ENSNBRG00000004723	-	95	43.011	Neolamprologus_brichardi
ENSCSEG00000019848	-	62	45.217	ENSNBRG00000004792	-	56	45.000	Neolamprologus_brichardi
ENSCSEG00000019848	-	64	42.029	ENSNBRG00000024179	-	61	42.029	Neolamprologus_brichardi
ENSCSEG00000019848	-	71	41.667	ENSNBRG00000016639	-	73	35.172	Neolamprologus_brichardi
ENSCSEG00000019848	-	80	39.759	ENSONIG00000014012	-	95	39.759	Oreochromis_niloticus
ENSCSEG00000019848	-	57	41.525	ENSONIG00000012374	-	99	41.525	Oreochromis_niloticus
ENSCSEG00000019848	-	76	41.905	ENSONIG00000015024	-	92	41.667	Oreochromis_niloticus
ENSCSEG00000019848	-	52	43.902	ENSONIG00000008297	-	92	43.902	Oreochromis_niloticus
ENSCSEG00000019848	-	68	41.615	ENSONIG00000001986	-	96	41.615	Oreochromis_niloticus
ENSCSEG00000019848	-	56	50.877	ENSONIG00000020667	-	99	50.877	Oreochromis_niloticus
ENSCSEG00000019848	-	57	41.606	ENSONIG00000019139	-	99	41.606	Oreochromis_niloticus
ENSCSEG00000019848	-	82	83.696	ENSORLG00000012581	-	79	83.696	Oryzias_latipes
ENSCSEG00000019848	-	64	43.137	ENSOMEG00000015179	-	63	42.308	Oryzias_melastigma
ENSCSEG00000019848	-	57	42.373	ENSPKIG00000015951	-	59	42.373	Paramormyrops_kingsleyae
ENSCSEG00000019848	-	56	42.073	ENSPMGG00000020606	-	91	42.073	Periophthalmus_magnuspinnatus
ENSCSEG00000019848	-	58	44.531	ENSPMGG00000008518	-	94	44.531	Periophthalmus_magnuspinnatus
ENSCSEG00000019848	-	56	44.848	ENSPFOG00000000667	-	63	44.848	Poecilia_formosa
ENSCSEG00000019848	-	53	42.593	ENSPFOG00000018771	-	63	42.593	Poecilia_formosa
ENSCSEG00000019848	-	74	45.455	ENSPLAG00000005106	-	87	45.455	Poecilia_latipinna
ENSCSEG00000019848	-	70	44.848	ENSPLAG00000013745	-	91	43.636	Poecilia_latipinna
ENSCSEG00000019848	-	74	43.137	ENSPMEG00000020864	-	95	46.067	Poecilia_mexicana
ENSCSEG00000019848	-	53	41.212	ENSPMEG00000022651	-	54	41.212	Poecilia_mexicana
ENSCSEG00000019848	-	89	42.982	ENSPREG00000021124	-	59	42.982	Poecilia_reticulata
ENSCSEG00000019848	-	55	45.349	ENSPNYG00000019325	-	64	45.349	Pundamilia_nyererei
ENSCSEG00000019848	-	56	41.212	ENSPNYG00000020737	-	82	41.212	Pundamilia_nyererei
ENSCSEG00000019848	-	60	42.361	ENSPNYG00000003834	-	90	42.361	Pundamilia_nyererei
ENSCSEG00000019848	-	81	35.606	ENSPNYG00000011024	-	81	35.573	Pundamilia_nyererei
ENSCSEG00000019848	-	62	45.217	ENSPNYG00000016157	-	54	45.217	Pundamilia_nyererei
ENSCSEG00000019848	-	68	38.308	ENSPNAG00000011660	-	52	38.308	Pygocentrus_nattereri
ENSCSEG00000019848	-	68	44.785	ENSPNAG00000025882	-	68	44.785	Pygocentrus_nattereri
ENSCSEG00000019848	-	52	46.018	ENSPNAG00000010850	-	72	46.018	Pygocentrus_nattereri
ENSCSEG00000019848	-	62	45.294	ENSSFOG00015006083	-	56	45.294	Scleropages_formosus
ENSCSEG00000019848	-	65	46.667	ENSSMAG00000013663	-	94	43.750	Scophthalmus_maximus
ENSCSEG00000019848	-	64	42.331	ENSSMAG00000013828	-	60	40.777	Scophthalmus_maximus
ENSCSEG00000019848	-	83	33.585	ENSSMAG00000006902	-	80	33.585	Scophthalmus_maximus
ENSCSEG00000019848	-	54	39.310	ENSSMAG00000004429	-	83	39.310	Scophthalmus_maximus
ENSCSEG00000019848	-	57	42.945	ENSSDUG00000015013	-	59	40.373	Seriola_dumerili
ENSCSEG00000019848	-	53	42.241	ENSSDUG00000023765	-	67	42.241	Seriola_dumerili
ENSCSEG00000019848	-	57	46.875	ENSSDUG00000023764	-	95	46.875	Seriola_dumerili
ENSCSEG00000019848	-	62	44.348	ENSSDUG00000022035	-	54	44.348	Seriola_dumerili
ENSCSEG00000019848	-	62	44.348	ENSSLDG00000025676	-	54	44.348	Seriola_lalandi_dorsalis
ENSCSEG00000019848	-	57	42.945	ENSSLDG00000021278	-	59	40.373	Seriola_lalandi_dorsalis
ENSCSEG00000019848	-	64	42.945	ENSSPAG00000007403	-	89	42.945	Stegastes_partitus
ENSCSEG00000019848	-	93	40.000	ENSSPAG00000008950	-	92	42.105	Stegastes_partitus
ENSCSEG00000019848	-	54	46.957	ENSSPAG00000007691	-	81	46.957	Stegastes_partitus
ENSCSEG00000019848	-	52	48.214	ENSTGUG00000018439	-	100	48.214	Taeniopygia_guttata
ENSCSEG00000019848	-	52	48.214	ENSTGUG00000018254	-	99	48.214	Taeniopygia_guttata
ENSCSEG00000019848	-	52	46.250	ENSTGUG00000015549	-	98	46.429	Taeniopygia_guttata
ENSCSEG00000019848	-	80	83.516	ENSTRUG00000023354	-	66	83.516	Takifugu_rubripes
ENSCSEG00000019848	-	53	37.931	ENSTRUG00000021167	-	70	31.818	Takifugu_rubripes
ENSCSEG00000019848	-	63	47.321	ENSTRUG00000023491	-	64	45.283	Takifugu_rubripes
ENSCSEG00000019848	-	58	43.210	ENSTNIG00000002344	-	100	43.210	Tetraodon_nigroviridis
ENSCSEG00000019848	-	54	48.649	ENSXCOG00000011372	-	62	48.649	Xiphophorus_couchianus
ENSCSEG00000019848	-	53	37.500	ENSXCOG00000013306	-	60	37.500	Xiphophorus_couchianus
ENSCSEG00000019848	-	52	43.434	ENSXCOG00000020769	-	77	43.434	Xiphophorus_couchianus
ENSCSEG00000019848	-	54	40.769	ENSXMAG00000022894	-	53	40.769	Xiphophorus_maculatus
ENSCSEG00000019848	-	68	41.139	ENSXMAG00000024973	-	66	41.139	Xiphophorus_maculatus