EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019870 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B2-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6607 bases
Position: chr2:8610734-8617340
Accession: 103397068
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000031050	RRM_1	PF00076.22	1.5e-13	1	1
ENSCSEP00000031050	SAP	PF02037.27	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031457	-	2091	XM_008335318	ENSCSEP00000031050	696 (aa)	XP_008333540	-

Gene Model

Click here to download ENSCSEG00000019870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019870's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019870	safb	69	42.883	ENSG00000160633	SAFB	93	43.354	Homo_sapiens
ENSCSEG00000019870	safb	99	70.171	ENSAPOG00000022508	safb	64	69.549	Acanthochromis_polyacanthus
ENSCSEG00000019870	safb	69	40.260	ENSAMEG00000012254	SAFB	97	41.223	Ailuropoda_melanoleuca
ENSCSEG00000019870	safb	99	73.506	ENSACIG00000006247	safb	100	73.506	Amphilophus_citrinellus
ENSCSEG00000019870	safb	100	74.802	ENSAOCG00000006308	safb	91	87.912	Amphiprion_ocellaris
ENSCSEG00000019870	safb	100	69.390	ENSAPEG00000023342	safb	64	68.165	Amphiprion_percula
ENSCSEG00000019870	safb	100	68.402	ENSATEG00000004998	safb	99	68.440	Anabas_testudineus
ENSCSEG00000019870	safb	60	38.640	ENSAPLG00000005780	-	97	42.312	Anas_platyrhynchos
ENSCSEG00000019870	safb	59	42.301	ENSAPLG00000006355	-	99	45.652	Anas_platyrhynchos
ENSCSEG00000019870	safb	50	57.820	ENSACAG00000016893	-	96	43.188	Anolis_carolinensis
ENSCSEG00000019870	safb	69	42.342	ENSANAG00000028821	SAFB	94	42.506	Aotus_nancymaae
ENSCSEG00000019870	safb	100	71.429	ENSACLG00000001926	safb	99	71.429	Astatotilapia_calliptera
ENSCSEG00000019870	safb	97	56.348	ENSAMXG00000018154	safb	98	56.757	Astyanax_mexicanus
ENSCSEG00000019870	safb	98	39.794	ENSBTAG00000007875	SAFB	95	40.698	Bos_taurus
ENSCSEG00000019870	safb	69	41.634	ENSCJAG00000017081	SAFB	93	50.299	Callithrix_jacchus
ENSCSEG00000019870	safb	69	40.584	ENSCAFG00000018803	SAFB	83	41.043	Canis_familiaris
ENSCSEG00000019870	safb	69	40.584	ENSCAFG00020018943	SAFB	96	41.383	Canis_lupus_dingo
ENSCSEG00000019870	safb	98	40.345	ENSCHIG00000007262	SAFB	95	40.957	Capra_hircus
ENSCSEG00000019870	safb	61	45.155	ENSTSYG00000001851	-	95	43.595	Carlito_syrichta
ENSCSEG00000019870	safb	50	51.923	ENSCPOG00000026322	SAFB	57	48.308	Cavia_porcellus
ENSCSEG00000019870	safb	69	42.162	ENSCCAG00000020193	SAFB	93	43.106	Cebus_capucinus
ENSCSEG00000019870	safb	69	42.703	ENSCATG00000029994	SAFB	93	43.602	Cercocebus_atys
ENSCSEG00000019870	safb	65	38.843	ENSCLAG00000007734	SAFB	94	40.636	Chinchilla_lanigera
ENSCSEG00000019870	safb	69	41.071	ENSCSAG00000009949	SAFB	94	42.197	Chlorocebus_sabaeus
ENSCSEG00000019870	safb	60	32.369	ENSCHOG00000003208	SAFB	87	37.450	Choloepus_hoffmanni
ENSCSEG00000019870	safb	79	48.936	ENSCPBG00000010936	-	83	47.599	Chrysemys_picta_bellii
ENSCSEG00000019870	safb	90	41.818	ENSCPBG00000010928	-	95	42.785	Chrysemys_picta_bellii
ENSCSEG00000019870	safb	98	42.036	ENSCANG00000019754	-	93	42.857	Colobus_angolensis_palliatus
ENSCSEG00000019870	safb	95	38.015	ENSCANG00000004774	-	92	36.788	Colobus_angolensis_palliatus
ENSCSEG00000019870	safb	65	38.245	ENSCGRG00001002254	Safb	94	40.385	Cricetulus_griseus_chok1gshd
ENSCSEG00000019870	safb	55	35.484	ENSCGRG00000011529	Safb	58	48.485	Cricetulus_griseus_crigri
ENSCSEG00000019870	safb	100	62.500	ENSCVAG00000002226	safb	99	61.979	Cyprinodon_variegatus
ENSCSEG00000019870	safb	96	54.031	ENSDARG00000020467	safb	98	56.235	Danio_rerio
ENSCSEG00000019870	safb	69	40.097	ENSDNOG00000015746	SAFB	95	39.879	Dasypus_novemcinctus
ENSCSEG00000019870	safb	65	39.008	ENSDORG00000016200	Safb	93	37.762	Dipodomys_ordii
ENSCSEG00000019870	safb	65	38.014	ENSEASG00005023019	SAFB	97	39.867	Equus_asinus_asinus
ENSCSEG00000019870	safb	65	39.487	ENSECAG00000018659	SAFB	87	40.468	Equus_caballus
ENSCSEG00000019870	safb	100	57.278	ENSELUG00000022327	safb	99	57.870	Esox_lucius
ENSCSEG00000019870	safb	69	38.961	ENSFCAG00000011835	SAFB	96	40.317	Felis_catus
ENSCSEG00000019870	safb	66	39.967	ENSFALG00000013882	-	87	42.548	Ficedula_albicollis
ENSCSEG00000019870	safb	100	63.001	ENSFHEG00000004219	safb	99	65.039	Fundulus_heteroclitus
ENSCSEG00000019870	safb	100	61.721	ENSGMOG00000014280	safb	99	59.776	Gadus_morhua
ENSCSEG00000019870	safb	65	40.128	ENSGALG00000001948	-	94	43.516	Gallus_gallus
ENSCSEG00000019870	safb	65	41.107	ENSGALG00000013365	-	94	43.349	Gallus_gallus
ENSCSEG00000019870	safb	100	61.805	ENSGAFG00000016162	safb	99	62.189	Gambusia_affinis
ENSCSEG00000019870	safb	100	64.910	ENSGACG00000011385	safb	99	65.868	Gasterosteus_aculeatus
ENSCSEG00000019870	safb	97	45.122	ENSGAGG00000008424	-	98	45.000	Gopherus_agassizii
ENSCSEG00000019870	safb	76	47.847	ENSGAGG00000017702	-	93	49.583	Gopherus_agassizii
ENSCSEG00000019870	safb	69	42.703	ENSGGOG00000015109	SAFB	97	41.441	Gorilla_gorilla
ENSCSEG00000019870	safb	100	76.294	ENSHBUG00000009218	safb	99	76.294	Haplochromis_burtoni
ENSCSEG00000019870	safb	65	38.640	ENSHGLG00000015883	SAFB	94	40.251	Heterocephalus_glaber_female
ENSCSEG00000019870	safb	99	35.080	ENSHGLG00100004228	SAFB	93	35.053	Heterocephalus_glaber_male
ENSCSEG00000019870	safb	94	59.103	ENSHCOG00000001705	safb	99	59.235	Hippocampus_comes
ENSCSEG00000019870	safb	99	57.091	ENSIPUG00000024869	safb2	98	57.316	Ictalurus_punctatus
ENSCSEG00000019870	safb	60	36.332	ENSSTOG00000002783	SAFB	96	38.526	Ictidomys_tridecemlineatus
ENSCSEG00000019870	safb	69	37.542	ENSJJAG00000009021	Safb	94	39.835	Jaculus_jaculus
ENSCSEG00000019870	safb	100	65.598	ENSKMAG00000022308	safb	99	66.831	Kryptolebias_marmoratus
ENSCSEG00000019870	safb	100	66.507	ENSLBEG00000006015	safb	64	66.111	Labrus_bergylta
ENSCSEG00000019870	safb	65	44.143	ENSLACG00000018090	SAFB	96	47.059	Latimeria_chalumnae
ENSCSEG00000019870	safb	99	56.776	ENSLOCG00000003613	safb	99	57.512	Lepisosteus_oculatus
ENSCSEG00000019870	safb	98	40.251	ENSLAFG00000003840	SAFB	97	40.873	Loxodonta_africana
ENSCSEG00000019870	safb	69	42.703	ENSMFAG00000003885	SAFB	93	43.602	Macaca_fascicularis
ENSCSEG00000019870	safb	94	40.023	ENSMMUG00000017970	SAFB	97	41.667	Macaca_mulatta
ENSCSEG00000019870	safb	95	42.785	ENSMNEG00000035637	SAFB	94	42.874	Macaca_nemestrina
ENSCSEG00000019870	safb	69	38.294	ENSMLEG00000038637	SAFB	94	41.745	Mandrillus_leucophaeus
ENSCSEG00000019870	safb	99	68.932	ENSMAMG00000003357	safb	90	68.932	Mastacembelus_armatus
ENSCSEG00000019870	safb	100	71.429	ENSMZEG00005009120	safb	99	71.429	Maylandia_zebra
ENSCSEG00000019870	safb	57	50.774	ENSMGAG00000001051	-	76	56.427	Meleagris_gallopavo
ENSCSEG00000019870	safb	64	37.708	ENSMGAG00000001101	-	97	41.676	Meleagris_gallopavo
ENSCSEG00000019870	safb	69	41.336	ENSMICG00000008739	-	93	43.230	Microcebus_murinus
ENSCSEG00000019870	safb	85	37.838	ENSMICG00000046795	-	95	37.838	Microcebus_murinus
ENSCSEG00000019870	safb	65	37.541	ENSMOCG00000014040	Safb	94	39.278	Microtus_ochrogaster
ENSCSEG00000019870	safb	67	39.905	ENSMODG00000001236	SAFB	94	41.375	Monodelphis_domestica
ENSCSEG00000019870	safb	100	67.186	ENSMALG00000020330	safb	99	63.853	Monopterus_albus
ENSCSEG00000019870	safb	53	53.968	MGP_CAROLIEiJ_G0021780	Safb	75	46.181	Mus_caroli
ENSCSEG00000019870	safb	65	39.052	ENSMUSG00000071054	Safb	75	46.004	Mus_musculus
ENSCSEG00000019870	safb	53	53.629	MGP_PahariEiJ_G0020769	Safb	75	46.181	Mus_pahari
ENSCSEG00000019870	safb	69	40.422	ENSMPUG00000006123	SAFB	90	41.601	Mustela_putorius_furo
ENSCSEG00000019870	safb	98	41.084	ENSMLUG00000001081	SAFB	93	41.067	Myotis_lucifugus
ENSCSEG00000019870	safb	65	37.748	ENSNGAG00000019882	Safb	71	48.462	Nannospalax_galili
ENSCSEG00000019870	safb	69	42.883	ENSNLEG00000013551	SAFB	96	43.506	Nomascus_leucogenys
ENSCSEG00000019870	safb	59	38.532	ENSOPRG00000011561	-	99	39.677	Ochotona_princeps
ENSCSEG00000019870	safb	65	39.057	ENSODEG00000014838	SAFB	94	40.136	Octodon_degus
ENSCSEG00000019870	safb	100	67.029	ENSONIG00000002318	safb	65	66.359	Oreochromis_niloticus
ENSCSEG00000019870	safb	85	38.083	ENSOCUG00000014628	SAFB	87	38.710	Oryctolagus_cuniculus
ENSCSEG00000019870	safb	98	64.906	ENSORLG00000016989	safb	65	63.208	Oryzias_latipes
ENSCSEG00000019870	safb	98	73.352	ENSORLG00020000404	safb	99	72.541	Oryzias_latipes_hni
ENSCSEG00000019870	safb	98	65.409	ENSORLG00015010733	safb	65	63.019	Oryzias_latipes_hsok
ENSCSEG00000019870	safb	99	64.699	ENSOMEG00000009066	safb	99	64.576	Oryzias_melastigma
ENSCSEG00000019870	safb	65	41.286	ENSOGAG00000027769	SAFB	97	40.397	Otolemur_garnettii
ENSCSEG00000019870	safb	98	37.457	ENSOARG00000007662	-	95	37.326	Ovis_aries
ENSCSEG00000019870	safb	80	36.170	ENSOARG00000007856	-	100	35.704	Ovis_aries
ENSCSEG00000019870	safb	69	42.523	ENSPPAG00000035129	SAFB	97	40.778	Pan_paniscus
ENSCSEG00000019870	safb	69	38.961	ENSPPRG00000017197	SAFB	96	40.317	Panthera_pardus
ENSCSEG00000019870	safb	69	42.523	ENSPTRG00000010335	SAFB	97	40.505	Pan_troglodytes
ENSCSEG00000019870	safb	69	42.523	ENSPANG00000007770	SAFB	93	43.478	Papio_anubis
ENSCSEG00000019870	safb	100	56.120	ENSPKIG00000009902	safb	66	53.368	Paramormyrops_kingsleyae
ENSCSEG00000019870	safb	99	41.830	ENSPSIG00000009367	-	94	42.632	Pelodiscus_sinensis
ENSCSEG00000019870	safb	99	42.345	ENSPSIG00000011679	-	97	44.872	Pelodiscus_sinensis
ENSCSEG00000019870	safb	51	53.571	ENSPEMG00000020428	Safb	72	48.106	Peromyscus_maniculatus_bairdii
ENSCSEG00000019870	safb	100	63.273	ENSPFOG00000007745	safb	99	65.167	Poecilia_formosa
ENSCSEG00000019870	safb	89	64.478	ENSPLAG00000001614	safb	99	61.718	Poecilia_latipinna
ENSCSEG00000019870	safb	100	63.273	ENSPMEG00000021023	safb	99	64.781	Poecilia_mexicana
ENSCSEG00000019870	safb	100	63.291	ENSPREG00000012496	safb	99	63.763	Poecilia_reticulata
ENSCSEG00000019870	safb	69	41.234	ENSPPYG00000009428	SAFB	94	41.947	Pongo_abelii
ENSCSEG00000019870	safb	96	37.972	ENSPCAG00000006475	SAFB	97	38.095	Procavia_capensis
ENSCSEG00000019870	safb	98	40.544	ENSPCOG00000014090	SAFB	93	40.806	Propithecus_coquereli
ENSCSEG00000019870	safb	98	38.046	ENSPVAG00000004913	SAFB	96	38.235	Pteropus_vampyrus
ENSCSEG00000019870	safb	99	57.429	ENSPNAG00000021838	safb	98	57.479	Pygocentrus_nattereri
ENSCSEG00000019870	safb	53	53.571	ENSRNOG00000050543	Safb	85	48.106	Rattus_norvegicus
ENSCSEG00000019870	safb	69	42.523	ENSRROG00000029278	SAFB	93	43.441	Rhinopithecus_roxellana
ENSCSEG00000019870	safb	69	42.162	ENSSBOG00000026291	SAFB	93	43.106	Saimiri_boliviensis_boliviensis
ENSCSEG00000019870	safb	100	57.407	ENSSFOG00015008156	safb	66	52.787	Scleropages_formosus
ENSCSEG00000019870	safb	100	68.720	ENSSMAG00000009316	safb	65	68.646	Scophthalmus_maximus
ENSCSEG00000019870	safb	100	76.115	ENSSDUG00000009652	safb	99	76.115	Seriola_dumerili
ENSCSEG00000019870	safb	100	70.767	ENSSLDG00000001670	safb	64	70.919	Seriola_lalandi_dorsalis
ENSCSEG00000019870	safb	60	37.774	ENSSARG00000010475	SAFB	96	39.320	Sorex_araneus
ENSCSEG00000019870	safb	55	39.220	ENSSPUG00000009747	-	99	38.592	Sphenodon_punctatus
ENSCSEG00000019870	safb	100	72.464	ENSSPAG00000015682	safb	99	73.016	Stegastes_partitus
ENSCSEG00000019870	safb	98	38.497	ENSSSCG00000013522	SAFB	96	41.480	Sus_scrofa
ENSCSEG00000019870	safb	66	40.301	ENSTGUG00000000502	-	98	42.906	Taeniopygia_guttata
ENSCSEG00000019870	safb	64	41.484	ENSTGUG00000000489	-	96	46.090	Taeniopygia_guttata
ENSCSEG00000019870	safb	100	66.299	ENSTRUG00000003567	safb	99	65.196	Takifugu_rubripes
ENSCSEG00000019870	safb	83	72.222	ENSTNIG00000015470	safb	85	72.222	Tetraodon_nigroviridis
ENSCSEG00000019870	safb	88	77.778	ENSTTRG00000013588	SAFB	79	77.778	Tursiops_truncatus
ENSCSEG00000019870	safb	66	40.956	ENSUMAG00000009734	SAFB	85	41.084	Ursus_maritimus
ENSCSEG00000019870	safb	69	41.234	ENSVVUG00000013720	SAFB	83	41.516	Vulpes_vulpes
ENSCSEG00000019870	safb	60	67.647	ENSXETG00000008755	safb	86	66.667	Xenopus_tropicalis
ENSCSEG00000019870	safb	100	63.402	ENSXMAG00000003458	safb	99	65.039	Xiphophorus_maculatus