EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019900 (Gene tree)
Gene ID: 103385365
Gene Symbol: apex2
Alias: zgc:55889
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3742 bases
Position: chr10:17911504-17915245
Accession: 103385365
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000031088	Exo_endo_phos	PF03372.23	7.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031495	-	2469	XM_008319232	ENSCSEP00000031088	571 (aa)	XP_008317454	UPI000497EC59

Gene Model

Click here to download ENSCSEG00000019900's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019900	apex2	98	44.655	ENSG00000169188	APEX2	99	44.655	Homo_sapiens
ENSCSEG00000019900	apex2	99	69.655	ENSAPOG00000005805	apex2	100	71.007	Acanthochromis_polyacanthus
ENSCSEG00000019900	apex2	98	45.423	ENSAMEG00000003608	APEX2	99	45.423	Ailuropoda_melanoleuca
ENSCSEG00000019900	apex2	99	69.861	ENSACIG00000010000	apex2	100	70.035	Amphilophus_citrinellus
ENSCSEG00000019900	apex2	99	70.345	ENSAOCG00000021774	apex2	100	71.080	Amphiprion_ocellaris
ENSCSEG00000019900	apex2	99	70.517	ENSAPEG00000020890	apex2	94	71.254	Amphiprion_percula
ENSCSEG00000019900	apex2	99	71.528	ENSATEG00000023600	apex2	100	71.528	Anabas_testudineus
ENSCSEG00000019900	apex2	99	48.325	ENSACAG00000011201	APEX2	99	48.501	Anolis_carolinensis
ENSCSEG00000019900	apex2	96	39.719	ENSANAG00000020845	-	99	39.719	Aotus_nancymaae
ENSCSEG00000019900	apex2	98	44.828	ENSANAG00000021907	-	99	44.828	Aotus_nancymaae
ENSCSEG00000019900	apex2	99	60.653	ENSAMXG00000007422	apex2	100	60.585	Astyanax_mexicanus
ENSCSEG00000019900	apex2	98	45.918	ENSBTAG00000013177	APEX2	99	45.918	Bos_taurus
ENSCSEG00000019900	apex2	98	44.483	ENSCJAG00000016584	APEX2	99	44.483	Callithrix_jacchus
ENSCSEG00000019900	apex2	98	43.857	ENSCAFG00000014310	APEX2	99	43.857	Canis_familiaris
ENSCSEG00000019900	apex2	98	44.710	ENSCAFG00020013818	APEX2	93	57.589	Canis_lupus_dingo
ENSCSEG00000019900	apex2	98	45.517	ENSCHIG00000019916	APEX2	99	46.299	Capra_hircus
ENSCSEG00000019900	apex2	98	45.111	ENSTSYG00000005612	APEX2	99	45.111	Carlito_syrichta
ENSCSEG00000019900	apex2	79	60.606	ENSCPOG00000007265	APEX2	89	60.606	Cavia_porcellus
ENSCSEG00000019900	apex2	69	52.500	ENSCCAG00000025405	-	82	52.500	Cebus_capucinus
ENSCSEG00000019900	apex2	98	44.637	ENSCATG00000044854	APEX2	99	44.637	Cercocebus_atys
ENSCSEG00000019900	apex2	98	44.597	ENSCLAG00000017315	APEX2	99	44.597	Chinchilla_lanigera
ENSCSEG00000019900	apex2	98	44.983	ENSCSAG00000012124	APEX2	99	44.983	Chlorocebus_sabaeus
ENSCSEG00000019900	apex2	99	46.235	ENSCPBG00000016631	APEX2	99	46.760	Chrysemys_picta_bellii
ENSCSEG00000019900	apex2	84	46.633	ENSCSAVG00000006052	-	100	46.633	Ciona_savignyi
ENSCSEG00000019900	apex2	98	44.637	ENSCANG00000003053	APEX2	99	44.637	Colobus_angolensis_palliatus
ENSCSEG00000019900	apex2	98	45.486	ENSCGRG00001008132	Apex2	99	45.486	Cricetulus_griseus_chok1gshd
ENSCSEG00000019900	apex2	98	45.486	ENSCGRG00000009667	Apex2	85	62.319	Cricetulus_griseus_crigri
ENSCSEG00000019900	apex2	99	68.458	ENSCVAG00000021583	apex2	100	68.631	Cyprinodon_variegatus
ENSCSEG00000019900	apex2	99	57.385	ENSDARG00000008472	apex2	100	57.895	Danio_rerio
ENSCSEG00000019900	apex2	98	45.043	ENSDNOG00000038901	APEX2	99	45.043	Dasypus_novemcinctus
ENSCSEG00000019900	apex2	73	60.274	ENSEBUG00000015654	apex2	86	60.274	Eptatretus_burgeri
ENSCSEG00000019900	apex2	98	46.167	ENSEASG00005011694	APEX2	90	46.167	Equus_asinus_asinus
ENSCSEG00000019900	apex2	98	46.167	ENSECAG00000026921	APEX2	90	46.167	Equus_caballus
ENSCSEG00000019900	apex2	98	45.533	ENSEEUG00000013172	APEX2	99	45.533	Erinaceus_europaeus
ENSCSEG00000019900	apex2	99	63.746	ENSELUG00000021417	apex2	99	63.746	Esox_lucius
ENSCSEG00000019900	apex2	98	44.618	ENSFCAG00000021990	APEX2	99	44.618	Felis_catus
ENSCSEG00000019900	apex2	98	44.696	ENSFDAG00000008076	APEX2	90	61.321	Fukomys_damarensis
ENSCSEG00000019900	apex2	99	62.045	ENSFHEG00000021411	apex2	99	62.738	Fundulus_heteroclitus
ENSCSEG00000019900	apex2	66	78.652	ENSGMOG00000019681	apex2	100	78.652	Gadus_morhua
ENSCSEG00000019900	apex2	99	68.174	ENSGAFG00000005829	apex2	100	68.174	Gambusia_affinis
ENSCSEG00000019900	apex2	65	89.143	ENSGACG00000012307	apex2	92	87.151	Gasterosteus_aculeatus
ENSCSEG00000019900	apex2	89	43.883	ENSGAGG00000011520	APEX2	88	43.883	Gopherus_agassizii
ENSCSEG00000019900	apex2	98	44.483	ENSGGOG00000002056	APEX2	99	44.483	Gorilla_gorilla
ENSCSEG00000019900	apex2	99	68.467	ENSHBUG00000009938	apex2	100	68.815	Haplochromis_burtoni
ENSCSEG00000019900	apex2	98	45.391	ENSHGLG00000000273	APEX2	96	58.036	Heterocephalus_glaber_female
ENSCSEG00000019900	apex2	99	65.499	ENSHCOG00000010165	apex2	100	65.499	Hippocampus_comes
ENSCSEG00000019900	apex2	99	59.022	ENSIPUG00000000352	APEX2	100	59.122	Ictalurus_punctatus
ENSCSEG00000019900	apex2	98	46.620	ENSSTOG00000025121	APEX2	86	61.321	Ictidomys_tridecemlineatus
ENSCSEG00000019900	apex2	98	46.181	ENSJJAG00000019611	Apex2	93	61.215	Jaculus_jaculus
ENSCSEG00000019900	apex2	99	69.634	ENSKMAG00000006985	apex2	100	69.634	Kryptolebias_marmoratus
ENSCSEG00000019900	apex2	99	72.743	ENSLBEG00000012139	apex2	100	72.743	Labrus_bergylta
ENSCSEG00000019900	apex2	99	48.562	ENSLACG00000000865	APEX2	100	48.562	Latimeria_chalumnae
ENSCSEG00000019900	apex2	99	58.793	ENSLOCG00000014467	apex2	100	59.310	Lepisosteus_oculatus
ENSCSEG00000019900	apex2	98	45.407	ENSLAFG00000018312	APEX2	99	45.407	Loxodonta_africana
ENSCSEG00000019900	apex2	98	44.810	ENSMFAG00000002486	APEX2	99	44.810	Macaca_fascicularis
ENSCSEG00000019900	apex2	98	44.810	ENSMMUG00000008428	APEX2	99	44.810	Macaca_mulatta
ENSCSEG00000019900	apex2	98	44.810	ENSMNEG00000036783	APEX2	99	44.810	Macaca_nemestrina
ENSCSEG00000019900	apex2	98	44.637	ENSMLEG00000028208	APEX2	99	44.637	Mandrillus_leucophaeus
ENSCSEG00000019900	apex2	99	69.712	ENSMAMG00000024220	apex2	100	69.712	Mastacembelus_armatus
ENSCSEG00000019900	apex2	99	68.118	ENSMZEG00005026322	apex2	100	68.467	Maylandia_zebra
ENSCSEG00000019900	apex2	98	43.276	ENSMICG00000043181	APEX2	99	43.276	Microcebus_murinus
ENSCSEG00000019900	apex2	98	45.122	ENSMOCG00000004339	Apex2	91	59.447	Microtus_ochrogaster
ENSCSEG00000019900	apex2	99	68.103	ENSMMOG00000017340	apex2	100	69.324	Mola_mola
ENSCSEG00000019900	apex2	98	50.977	ENSMODG00000005341	APEX2	99	50.977	Monodelphis_domestica
ENSCSEG00000019900	apex2	99	70.719	ENSMALG00000014179	apex2	100	70.719	Monopterus_albus
ENSCSEG00000019900	apex2	98	46.690	MGP_CAROLIEiJ_G0033484	Apex2	100	53.986	Mus_caroli
ENSCSEG00000019900	apex2	98	45.645	ENSMUSG00000025269	Apex2	99	53.986	Mus_musculus
ENSCSEG00000019900	apex2	98	46.690	MGP_PahariEiJ_G0032023	Apex2	93	61.611	Mus_pahari
ENSCSEG00000019900	apex2	98	46.341	MGP_SPRETEiJ_G0034654	Apex2	100	53.986	Mus_spretus
ENSCSEG00000019900	apex2	98	44.870	ENSMPUG00000003293	APEX2	99	44.870	Mustela_putorius_furo
ENSCSEG00000019900	apex2	98	44.692	ENSMLUG00000004562	-	99	44.692	Myotis_lucifugus
ENSCSEG00000019900	apex2	98	46.181	ENSMLUG00000016298	-	99	46.181	Myotis_lucifugus
ENSCSEG00000019900	apex2	98	44.599	ENSNGAG00000013576	Apex2	99	44.599	Nannospalax_galili
ENSCSEG00000019900	apex2	99	68.641	ENSNBRG00000010099	apex2	100	68.990	Neolamprologus_brichardi
ENSCSEG00000019900	apex2	63	53.571	ENSNLEG00000032067	-	87	53.571	Nomascus_leucogenys
ENSCSEG00000019900	apex2	99	68.641	ENSONIG00000016881	apex2	100	69.512	Oreochromis_niloticus
ENSCSEG00000019900	apex2	92	52.830	ENSOANG00000000689	-	96	52.996	Ornithorhynchus_anatinus
ENSCSEG00000019900	apex2	98	39.273	ENSOCUG00000000570	APEX2	99	39.273	Oryctolagus_cuniculus
ENSCSEG00000019900	apex2	99	67.826	ENSORLG00000014053	apex2	100	67.826	Oryzias_latipes
ENSCSEG00000019900	apex2	99	67.304	ENSORLG00020013253	apex2	100	67.304	Oryzias_latipes_hni
ENSCSEG00000019900	apex2	99	67.652	ENSORLG00015007515	apex2	100	67.652	Oryzias_latipes_hsok
ENSCSEG00000019900	apex2	99	69.512	ENSOMEG00000003655	apex2	100	69.512	Oryzias_melastigma
ENSCSEG00000019900	apex2	98	45.848	ENSOGAG00000007797	APEX2	99	45.848	Otolemur_garnettii
ENSCSEG00000019900	apex2	98	45.517	ENSOARG00000005742	APEX2	99	46.299	Ovis_aries
ENSCSEG00000019900	apex2	98	44.655	ENSPPAG00000035747	APEX2	99	44.655	Pan_paniscus
ENSCSEG00000019900	apex2	98	44.444	ENSPPRG00000002440	APEX2	99	44.444	Panthera_pardus
ENSCSEG00000019900	apex2	98	44.041	ENSPTIG00000021651	APEX2	99	44.041	Panthera_tigris_altaica
ENSCSEG00000019900	apex2	98	44.655	ENSPTRG00000021946	APEX2	99	44.655	Pan_troglodytes
ENSCSEG00000019900	apex2	98	44.637	ENSPANG00000003595	APEX2	99	44.637	Papio_anubis
ENSCSEG00000019900	apex2	99	60.794	ENSPKIG00000007752	apex2	100	61.313	Paramormyrops_kingsleyae
ENSCSEG00000019900	apex2	99	67.304	ENSPMGG00000009151	apex2	100	67.304	Periophthalmus_magnuspinnatus
ENSCSEG00000019900	apex2	98	45.645	ENSPEMG00000016475	Apex2	89	59.633	Peromyscus_maniculatus_bairdii
ENSCSEG00000019900	apex2	98	49.378	ENSPCIG00000007633	APEX2	98	50.089	Phascolarctos_cinereus
ENSCSEG00000019900	apex2	99	68.522	ENSPFOG00000000408	apex2	100	68.696	Poecilia_formosa
ENSCSEG00000019900	apex2	99	68.522	ENSPLAG00000023814	apex2	100	68.696	Poecilia_latipinna
ENSCSEG00000019900	apex2	99	68.348	ENSPMEG00000023222	apex2	100	68.522	Poecilia_mexicana
ENSCSEG00000019900	apex2	98	44.483	ENSPPYG00000020388	APEX2	99	44.483	Pongo_abelii
ENSCSEG00000019900	apex2	98	45.234	ENSPCOG00000016083	APEX2	99	45.234	Propithecus_coquereli
ENSCSEG00000019900	apex2	91	46.374	ENSPVAG00000007851	APEX2	99	46.374	Pteropus_vampyrus
ENSCSEG00000019900	apex2	99	68.293	ENSPNYG00000015698	apex2	100	68.641	Pundamilia_nyererei
ENSCSEG00000019900	apex2	99	58.824	ENSPNAG00000011666	apex2	100	58.824	Pygocentrus_nattereri
ENSCSEG00000019900	apex2	98	46.690	ENSRNOG00000000166	Apex2	99	46.690	Rattus_norvegicus
ENSCSEG00000019900	apex2	98	44.637	ENSRBIG00000036500	APEX2	99	44.637	Rhinopithecus_bieti
ENSCSEG00000019900	apex2	98	44.637	ENSRROG00000032674	APEX2	99	44.637	Rhinopithecus_roxellana
ENSCSEG00000019900	apex2	63	46.000	YBL019W	APN2	76	46.000	Saccharomyces_cerevisiae
ENSCSEG00000019900	apex2	98	45.189	ENSSBOG00000030500	-	99	45.533	Saimiri_boliviensis_boliviensis
ENSCSEG00000019900	apex2	95	38.657	ENSSBOG00000003489	-	96	38.657	Saimiri_boliviensis_boliviensis
ENSCSEG00000019900	apex2	98	51.767	ENSSHAG00000007846	APEX2	99	51.767	Sarcophilus_harrisii
ENSCSEG00000019900	apex2	85	83.077	ENSSFOG00015010354	apex2	100	74.026	Scleropages_formosus
ENSCSEG00000019900	apex2	99	70.017	ENSSMAG00000012753	apex2	100	70.537	Scophthalmus_maximus
ENSCSEG00000019900	apex2	99	74.315	ENSSDUG00000022892	apex2	100	75.000	Seriola_dumerili
ENSCSEG00000019900	apex2	99	74.829	ENSSLDG00000024347	apex2	100	75.171	Seriola_lalandi_dorsalis
ENSCSEG00000019900	apex2	98	45.329	ENSSARG00000010297	APEX2	99	45.329	Sorex_araneus
ENSCSEG00000019900	apex2	99	70.486	ENSSPAG00000016279	apex2	100	71.626	Stegastes_partitus
ENSCSEG00000019900	apex2	98	45.222	ENSSSCG00000012348	-	99	45.222	Sus_scrofa
ENSCSEG00000019900	apex2	99	65.744	ENSTRUG00000015660	apex2	100	65.744	Takifugu_rubripes
ENSCSEG00000019900	apex2	84	62.249	ENSTNIG00000003725	apex2	96	70.667	Tetraodon_nigroviridis
ENSCSEG00000019900	apex2	91	45.507	ENSTBEG00000010520	APEX2	99	45.507	Tupaia_belangeri
ENSCSEG00000019900	apex2	98	45.172	ENSUAMG00000004720	APEX2	93	58.482	Ursus_americanus
ENSCSEG00000019900	apex2	98	43.253	ENSUMAG00000002892	APEX2	99	43.178	Ursus_maritimus
ENSCSEG00000019900	apex2	98	44.768	ENSVVUG00000005989	APEX2	99	44.768	Vulpes_vulpes
ENSCSEG00000019900	apex2	99	48.776	ENSXETG00000022026	apex2	99	48.776	Xenopus_tropicalis
ENSCSEG00000019900	apex2	99	68.293	ENSXMAG00000025740	apex2	100	68.293	Xiphophorus_maculatus