EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000019951 (Gene tree)
Gene ID: 103391402
Gene Symbol: lsm11
Alias: im:7149708
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 4873 bases
Position: chr15:19030163-19035035
Accession: 103391402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000031169	LSM	PF01423.22	9.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000031576	-	4107	XM_008327658	ENSCSEP00000031169	307 (aa)	XP_008325880	UPI000495723F

Gene Model

Click here to download ENSCSEG00000019951's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000019951's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000019951	lsm11	50	41.463	ENSCLAG00000017067	LSM11	88	40.488	Chinchilla_lanigera
ENSCSEG00000019951	lsm11	50	40.291	ENSCHOG00000010946	LSM11	98	40.488	Choloepus_hoffmanni
ENSCSEG00000019951	lsm11	55	30.588	ENSCING00000002109	-	84	30.588	Ciona_intestinalis
ENSCSEG00000019951	lsm11	85	31.579	ENSCSAVG00000011571	-	98	31.579	Ciona_savignyi
ENSCSEG00000019951	lsm11	50	41.463	ENSCANG00000040781	LSM11	98	41.463	Colobus_angolensis_palliatus
ENSCSEG00000019951	lsm11	56	38.565	ENSCGRG00000000197	Lsm11	98	38.565	Cricetulus_griseus_crigri
ENSCSEG00000019951	lsm11	100	61.981	ENSCVAG00000011703	lsm11	100	63.578	Cyprinodon_variegatus
ENSCSEG00000019951	lsm11	91	30.132	FBgn0033450	Lsm11	99	30.132	Drosophila_melanogaster
ENSCSEG00000019951	lsm11	50	40.488	ENSEEUG00000010814	LSM11	98	40.488	Erinaceus_europaeus
ENSCSEG00000019951	lsm11	50	41.463	ENSMLEG00000027420	LSM11	98	41.463	Mandrillus_leucophaeus
ENSCSEG00000019951	lsm11	100	62.893	ENSMMOG00000009365	lsm11	100	62.080	Mola_mola
ENSCSEG00000019951	lsm11	53	45.143	ENSMLUG00000015930	LSM11	98	45.143	Myotis_lucifugus
ENSCSEG00000019951	lsm11	50	39.024	ENSOGAG00000009059	LSM11	97	39.024	Otolemur_garnettii
ENSCSEG00000019951	lsm11	50	40.488	ENSPSIG00000005234	LSM11	97	40.488	Pelodiscus_sinensis
ENSCSEG00000019951	lsm11	100	62.102	ENSPMGG00000020709	lsm11	100	62.102	Periophthalmus_magnuspinnatus
ENSCSEG00000019951	lsm11	100	63.863	ENSPFOG00000000512	lsm11	98	63.863	Poecilia_formosa
ENSCSEG00000019951	lsm11	100	63.665	ENSPLAG00000019434	lsm11	100	63.665	Poecilia_latipinna
ENSCSEG00000019951	lsm11	100	65.517	ENSPREG00000019696	lsm11	89	65.517	Poecilia_reticulata
ENSCSEG00000019951	lsm11	51	39.048	ENSPCAG00000016360	LSM11	99	39.524	Procavia_capensis
ENSCSEG00000019951	lsm11	50	41.463	ENSTBEG00000000992	LSM11	98	41.463	Tupaia_belangeri
ENSCSEG00000019951	lsm11	98	65.161	ENSXMAG00000008238	lsm11	100	65.094	Xiphophorus_maculatus