EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000020337 (Gene tree)
Gene ID: 103391451
Gene Symbol: -
Alias: -
Full Name: histone RNA hairpin-binding protein
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 3132 bases
Position: chr15:19776586-19779717
Accession: 103391451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000031730	SLBP_RNA_bind	PF15247.6	9.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000032140	-	895	XM_008327718	ENSCSEP00000031730	274 (aa)	XP_008325940	UPI000496A5A0

Gene Model

Click here to download ENSCSEG00000020337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020337	-	90	52.209	ENSG00000163950	SLBP	80	59.748	Homo_sapiens
ENSCSEG00000020337	-	99	73.646	ENSAPOG00000004953	slbp	98	73.646	Acanthochromis_polyacanthus
ENSCSEG00000020337	-	55	65.190	ENSAMEG00000016915	SLBP	89	55.869	Ailuropoda_melanoleuca
ENSCSEG00000020337	-	90	72.908	ENSACIG00000022308	slbp	94	72.800	Amphilophus_citrinellus
ENSCSEG00000020337	-	99	73.188	ENSAOCG00000024545	slbp	98	73.188	Amphiprion_ocellaris
ENSCSEG00000020337	-	99	73.285	ENSAPEG00000017629	slbp	98	73.285	Amphiprion_percula
ENSCSEG00000020337	-	99	75.180	ENSATEG00000016358	slbp	98	75.180	Anabas_testudineus
ENSCSEG00000020337	-	76	52.632	ENSAPLG00000015989	-	90	55.660	Anas_platyrhynchos
ENSCSEG00000020337	-	93	48.327	ENSANAG00000034769	SLBP	84	53.636	Aotus_nancymaae
ENSCSEG00000020337	-	97	72.527	ENSACLG00000007036	-	97	72.527	Astatotilapia_calliptera
ENSCSEG00000020337	-	96	56.506	ENSAMXG00000014527	slbp	95	57.414	Astyanax_mexicanus
ENSCSEG00000020337	-	76	60.000	ENSBTAG00000001328	SLBP	85	52.529	Bos_taurus
ENSCSEG00000020337	-	93	47.970	ENSCJAG00000001790	SLBP	88	47.810	Callithrix_jacchus
ENSCSEG00000020337	-	89	52.227	ENSCAFG00000015016	SLBP	83	52.590	Canis_familiaris
ENSCSEG00000020337	-	89	52.227	ENSCAFG00020012334	SLBP	83	52.590	Canis_lupus_dingo
ENSCSEG00000020337	-	76	60.000	ENSCHIG00000019364	SLBP	87	51.711	Capra_hircus
ENSCSEG00000020337	-	65	63.889	ENSTSYG00000000376	SLBP	88	50.758	Carlito_syrichta
ENSCSEG00000020337	-	61	52.941	ENSCAPG00000016340	SLBP	86	52.601	Cavia_aperea
ENSCSEG00000020337	-	64	63.483	ENSCPOG00000000031	SLBP	81	53.846	Cavia_porcellus
ENSCSEG00000020337	-	90	52.209	ENSCATG00000029173	SLBP	82	54.673	Cercocebus_atys
ENSCSEG00000020337	-	58	68.125	ENSCLAG00000008157	SLBP	85	52.756	Chinchilla_lanigera
ENSCSEG00000020337	-	62	50.867	ENSCSAG00000015628	SLBP	60	50.568	Chlorocebus_sabaeus
ENSCSEG00000020337	-	89	51.793	ENSCPBG00000000746	SLBP	84	51.793	Chrysemys_picta_bellii
ENSCSEG00000020337	-	75	55.024	ENSCANG00000041008	SLBP	89	54.245	Colobus_angolensis_palliatus
ENSCSEG00000020337	-	81	54.667	ENSCGRG00001009760	-	83	51.793	Cricetulus_griseus_chok1gshd
ENSCSEG00000020337	-	75	57.212	ENSCGRG00001012991	-	84	51.822	Cricetulus_griseus_chok1gshd
ENSCSEG00000020337	-	81	54.667	ENSCGRG00000004506	Slbp	83	51.793	Cricetulus_griseus_crigri
ENSCSEG00000020337	-	92	67.843	ENSCVAG00000019592	-	94	67.843	Cyprinodon_variegatus
ENSCSEG00000020337	-	92	57.588	ENSDARG00000100558	slbp	83	58.366	Danio_rerio
ENSCSEG00000020337	-	74	57.895	ENSDNOG00000047539	SLBP	85	51.587	Dasypus_novemcinctus
ENSCSEG00000020337	-	59	60.976	ENSDORG00000003028	Slbp	91	67.532	Dipodomys_ordii
ENSCSEG00000020337	-	70	55.729	ENSETEG00000004641	SLBP	94	50.000	Echinops_telfairi
ENSCSEG00000020337	-	73	61.576	ENSECAG00000011689	SLBP	64	61.165	Equus_caballus
ENSCSEG00000020337	-	95	56.716	ENSELUG00000012854	slbp	94	58.955	Esox_lucius
ENSCSEG00000020337	-	66	59.669	ENSFCAG00000000169	SLBP	85	52.918	Felis_catus
ENSCSEG00000020337	-	93	54.086	ENSFALG00000010003	-	83	54.918	Ficedula_albicollis
ENSCSEG00000020337	-	58	68.750	ENSFDAG00000007592	SLBP	89	54.000	Fukomys_damarensis
ENSCSEG00000020337	-	96	66.165	ENSFHEG00000007497	slbp	98	65.789	Fundulus_heteroclitus
ENSCSEG00000020337	-	56	74.522	ENSGMOG00000015352	slbp	100	73.750	Gadus_morhua
ENSCSEG00000020337	-	91	54.688	ENSGALG00000015712	SLBP	86	54.688	Gallus_gallus
ENSCSEG00000020337	-	98	69.888	ENSGAFG00000019577	slbp	97	71.032	Gambusia_affinis
ENSCSEG00000020337	-	92	65.098	ENSGACG00000019596	slbp	93	65.098	Gasterosteus_aculeatus
ENSCSEG00000020337	-	74	59.024	ENSGAGG00000012096	SLBP	81	59.024	Gopherus_agassizii
ENSCSEG00000020337	-	90	52.209	ENSGGOG00000003167	SLBP	86	53.363	Gorilla_gorilla
ENSCSEG00000020337	-	97	72.894	ENSHBUG00000003338	-	97	72.894	Haplochromis_burtoni
ENSCSEG00000020337	-	60	56.897	ENSHGLG00000008313	-	86	45.783	Heterocephalus_glaber_female
ENSCSEG00000020337	-	78	50.000	ENSHGLG00000010461	-	85	49.160	Heterocephalus_glaber_female
ENSCSEG00000020337	-	78	50.000	ENSHGLG00100014906	-	85	49.160	Heterocephalus_glaber_male
ENSCSEG00000020337	-	58	68.125	ENSHGLG00100014018	-	91	61.856	Heterocephalus_glaber_male
ENSCSEG00000020337	-	60	58.046	ENSHGLG00100010510	-	86	46.586	Heterocephalus_glaber_male
ENSCSEG00000020337	-	99	69.004	ENSHCOG00000013425	slbp	98	69.004	Hippocampus_comes
ENSCSEG00000020337	-	75	63.380	ENSIPUG00000016780	slbp	90	57.317	Ictalurus_punctatus
ENSCSEG00000020337	-	66	62.637	ENSSTOG00000003262	SLBP	83	52.400	Ictidomys_tridecemlineatus
ENSCSEG00000020337	-	89	52.632	ENSJJAG00000002394	-	83	51.793	Jaculus_jaculus
ENSCSEG00000020337	-	76	58.768	ENSJJAG00000020549	-	83	52.988	Jaculus_jaculus
ENSCSEG00000020337	-	95	68.421	ENSKMAG00000008187	slbp	95	68.421	Kryptolebias_marmoratus
ENSCSEG00000020337	-	99	75.458	ENSLBEG00000024709	slbp	99	75.458	Labrus_bergylta
ENSCSEG00000020337	-	91	46.642	ENSLACG00000014623	SLBP	86	48.207	Latimeria_chalumnae
ENSCSEG00000020337	-	92	58.113	ENSLOCG00000011027	slbp	87	58.555	Lepisosteus_oculatus
ENSCSEG00000020337	-	72	60.199	ENSLAFG00000012933	SLBP	82	58.937	Loxodonta_africana
ENSCSEG00000020337	-	88	52.653	ENSMFAG00000030130	SLBP	76	49.749	Macaca_fascicularis
ENSCSEG00000020337	-	91	50.763	ENSMMUG00000032303	SLBP	85	54.930	Macaca_mulatta
ENSCSEG00000020337	-	53	53.595	ENSMNEG00000008082	SLBP	64	53.205	Macaca_nemestrina
ENSCSEG00000020337	-	78	53.670	ENSMLEG00000024639	SLBP	82	52.137	Mandrillus_leucophaeus
ENSCSEG00000020337	-	99	69.065	ENSMAMG00000001046	-	98	69.065	Mastacembelus_armatus
ENSCSEG00000020337	-	97	72.894	ENSMZEG00005017261	-	97	72.894	Maylandia_zebra
ENSCSEG00000020337	-	76	58.373	ENSMGAG00000013085	SLBP	90	58.373	Meleagris_gallopavo
ENSCSEG00000020337	-	81	54.667	ENSMAUG00000009490	Slbp	88	50.000	Mesocricetus_auratus
ENSCSEG00000020337	-	65	62.778	ENSMICG00000014244	SLBP	86	50.388	Microcebus_murinus
ENSCSEG00000020337	-	78	56.364	ENSMOCG00000015826	Slbp	86	60.622	Microtus_ochrogaster
ENSCSEG00000020337	-	92	62.698	ENSMMOG00000010181	slbp	94	62.698	Mola_mola
ENSCSEG00000020337	-	74	58.852	ENSMODG00000004304	SLBP	90	52.124	Monodelphis_domestica
ENSCSEG00000020337	-	98	75.273	ENSMALG00000013883	-	73	74.460	Monopterus_albus
ENSCSEG00000020337	-	78	56.364	MGP_CAROLIEiJ_G0027117	Slbp	83	60.622	Mus_caroli
ENSCSEG00000020337	-	78	56.364	ENSMUSG00000004642	Slbp	84	60.622	Mus_musculus
ENSCSEG00000020337	-	78	56.364	MGP_PahariEiJ_G0016901	Slbp	83	60.622	Mus_pahari
ENSCSEG00000020337	-	78	56.364	MGP_SPRETEiJ_G0028113	Slbp	84	60.622	Mus_spretus
ENSCSEG00000020337	-	62	51.111	ENSMPUG00000011139	SLBP	82	54.237	Mustela_putorius_furo
ENSCSEG00000020337	-	55	66.447	ENSMLUG00000004425	SLBP	83	50.000	Myotis_lucifugus
ENSCSEG00000020337	-	82	55.752	ENSNGAG00000020799	Slbp	87	50.943	Nannospalax_galili
ENSCSEG00000020337	-	91	70.428	ENSNBRG00000006044	-	97	70.428	Neolamprologus_brichardi
ENSCSEG00000020337	-	90	50.781	ENSNLEG00000000048	SLBP	86	53.363	Nomascus_leucogenys
ENSCSEG00000020337	-	53	69.595	ENSMEUG00000002501	SLBP	91	62.069	Notamacropus_eugenii
ENSCSEG00000020337	-	58	69.375	ENSODEG00000012641	SLBP	84	54.508	Octodon_degus
ENSCSEG00000020337	-	97	73.260	ENSONIG00000017469	-	97	73.260	Oreochromis_niloticus
ENSCSEG00000020337	-	77	56.667	ENSOANG00000014243	SLBP	85	56.667	Ornithorhynchus_anatinus
ENSCSEG00000020337	-	99	63.869	ENSORLG00000024887	-	99	63.869	Oryzias_latipes
ENSCSEG00000020337	-	99	61.538	ENSORLG00020007798	slbp	99	61.538	Oryzias_latipes_hni
ENSCSEG00000020337	-	99	63.504	ENSORLG00015016656	slbp	99	63.504	Oryzias_latipes_hsok
ENSCSEG00000020337	-	92	65.737	ENSOMEG00000010818	slbp	99	63.504	Oryzias_melastigma
ENSCSEG00000020337	-	81	53.304	ENSOGAG00000009750	SLBP	83	52.000	Otolemur_garnettii
ENSCSEG00000020337	-	55	69.737	ENSOARG00000016090	SLBP	89	55.399	Ovis_aries
ENSCSEG00000020337	-	90	51.807	ENSPPAG00000033300	SLBP	86	53.363	Pan_paniscus
ENSCSEG00000020337	-	59	63.415	ENSPPRG00000016897	SLBP	90	52.632	Panthera_pardus
ENSCSEG00000020337	-	91	51.172	ENSPTRG00000015832	SLBP	86	53.363	Pan_troglodytes
ENSCSEG00000020337	-	89	50.980	ENSPANG00000004932	SLBP	82	54.673	Papio_anubis
ENSCSEG00000020337	-	95	55.970	ENSPKIG00000006183	slbp	87	56.693	Paramormyrops_kingsleyae
ENSCSEG00000020337	-	87	61.667	ENSPMGG00000017684	-	99	65.625	Periophthalmus_magnuspinnatus
ENSCSEG00000020337	-	76	57.346	ENSPEMG00000018369	Slbp	83	52.000	Peromyscus_maniculatus_bairdii
ENSCSEG00000020337	-	68	58.794	ENSPCIG00000013575	SLBP	71	49.624	Phascolarctos_cinereus
ENSCSEG00000020337	-	98	70.632	ENSPFOG00000000462	slbp	98	70.632	Poecilia_formosa
ENSCSEG00000020337	-	98	70.260	ENSPLAG00000008300	slbp	98	70.260	Poecilia_latipinna
ENSCSEG00000020337	-	98	70.632	ENSPMEG00000020807	slbp	98	70.632	Poecilia_mexicana
ENSCSEG00000020337	-	98	71.004	ENSPREG00000004561	slbp	98	71.004	Poecilia_reticulata
ENSCSEG00000020337	-	90	52.610	ENSPPYG00000014529	SLBP	83	52.381	Pongo_abelii
ENSCSEG00000020337	-	65	62.778	ENSPCOG00000017399	SLBP	88	49.242	Propithecus_coquereli
ENSCSEG00000020337	-	92	48.062	ENSPVAG00000002807	SLBP	76	54.630	Pteropus_vampyrus
ENSCSEG00000020337	-	97	72.894	ENSPNYG00000005451	-	97	72.894	Pundamilia_nyererei
ENSCSEG00000020337	-	99	55.357	ENSPNAG00000018503	slbp	99	54.839	Pygocentrus_nattereri
ENSCSEG00000020337	-	78	56.364	ENSRNOG00000037162	Slbp	86	51.351	Rattus_norvegicus
ENSCSEG00000020337	-	90	52.209	ENSRBIG00000039159	SLBP	82	54.673	Rhinopithecus_bieti
ENSCSEG00000020337	-	91	51.751	ENSRROG00000030081	SLBP	87	51.154	Rhinopithecus_roxellana
ENSCSEG00000020337	-	66	54.595	ENSSBOG00000033897	SLBP	89	53.723	Saimiri_boliviensis_boliviensis
ENSCSEG00000020337	-	68	60.396	ENSSHAG00000013939	SLBP	83	50.929	Sarcophilus_harrisii
ENSCSEG00000020337	-	91	60.159	ENSSFOG00015019429	slbp	89	60.159	Scleropages_formosus
ENSCSEG00000020337	-	99	76.259	ENSSMAG00000016028	-	98	76.259	Scophthalmus_maximus
ENSCSEG00000020337	-	98	79.336	ENSSDUG00000000855	-	98	79.336	Seriola_dumerili
ENSCSEG00000020337	-	92	59.375	ENSSLDG00000007554	-	83	58.984	Seriola_lalandi_dorsalis
ENSCSEG00000020337	-	52	80.137	ENSSLDG00000022893	-	86	80.137	Seriola_lalandi_dorsalis
ENSCSEG00000020337	-	91	45.968	ENSSPUG00000016007	SLBP	88	50.397	Sphenodon_punctatus
ENSCSEG00000020337	-	99	72.563	ENSSPAG00000004021	slbp	100	73.256	Stegastes_partitus
ENSCSEG00000020337	-	78	58.333	ENSSSCG00000008676	SLBP	85	52.529	Sus_scrofa
ENSCSEG00000020337	-	91	54.217	ENSTGUG00000010626	-	90	54.217	Taeniopygia_guttata
ENSCSEG00000020337	-	99	70.588	ENSTRUG00000000688	slbp	98	70.588	Takifugu_rubripes
ENSCSEG00000020337	-	91	67.600	ENSTNIG00000000484	-	98	67.600	Tetraodon_nigroviridis
ENSCSEG00000020337	-	62	36.471	ENSTBEG00000004085	SLBP	84	32.456	Tupaia_belangeri
ENSCSEG00000020337	-	54	63.576	ENSTTRG00000004010	-	91	57.895	Tursiops_truncatus
ENSCSEG00000020337	-	54	69.536	ENSTTRG00000010901	-	89	55.189	Tursiops_truncatus
ENSCSEG00000020337	-	70	59.901	ENSUAMG00000012990	SLBP	84	52.918	Ursus_americanus
ENSCSEG00000020337	-	89	52.227	ENSVVUG00000015578	-	83	52.590	Vulpes_vulpes
ENSCSEG00000020337	-	95	47.388	ENSXETG00000003876	slbp	91	48.450	Xenopus_tropicalis
ENSCSEG00000020337	-	95	68.321	ENSXCOG00000008275	slbp	97	69.685	Xiphophorus_couchianus
ENSCSEG00000020337	-	98	69.517	ENSXMAG00000001331	-	97	69.517	Xiphophorus_maculatus