EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000020451 (Gene tree)
Gene ID
103390358
Gene Symbol
prpf4
Alias
mg:ab03a02|zgc:65943
Full Name
pre-mRNA processing factor 4
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
4333 bases
Position
chr14:27035685-27040017
Accession
103390358
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000031892PRP4PF08799.112.5e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000032303-1553XM_008326186ENSCSEP00000031892506 (aa)XP_008324408UPI0004956A48
Gene Model
Click here to download ENSCSEG00000020451's gene model file
Pathways
Pathway IDPathway NameSource
csem03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020451's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000020451prpf45834.783ENSCSEG00000010287POC1A6934.783
ENSCSEG00000020451prpf45835.065ENSCSEG00000005130wdr58935.065
ENSCSEG00000020451prpf46034.591ENSCSEG00000015634tbl36734.591
ENSCSEG00000020451prpf45930.078ENSCSEG00000008139-8930.078
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000020451prpf49975.644ENSG00000136875PRPF49775.644Homo_sapiens
ENSCSEG00000020451prpf49987.578ENSAPOG00000014132prpf49987.578Acanthochromis_polyacanthus
ENSCSEG00000020451prpf49975.842ENSAMEG00000013048PRPF49575.842Ailuropoda_melanoleuca
ENSCSEG00000020451prpf410089.020ENSACIG00000005579prpf410089.020Amphilophus_citrinellus
ENSCSEG00000020451prpf410087.451ENSAOCG00000005457prpf410087.451Amphiprion_ocellaris
ENSCSEG00000020451prpf410087.255ENSAPEG00000000776prpf410087.255Amphiprion_percula
ENSCSEG00000020451prpf410087.059ENSATEG00000023013prpf410087.059Anabas_testudineus
ENSCSEG00000020451prpf49976.832ENSAPLG00000006534PRPF49476.832Anas_platyrhynchos
ENSCSEG00000020451prpf49975.442ENSACAG00000015110PRPF49875.442Anolis_carolinensis
ENSCSEG00000020451prpf49975.842ENSANAG00000022464PRPF49375.842Aotus_nancymaae
ENSCSEG00000020451prpf410087.451ENSACLG00000019031prpf410087.451Astatotilapia_calliptera
ENSCSEG00000020451prpf49164.179ENSAMXG00000006756prpf49973.267Astyanax_mexicanus
ENSCSEG00000020451prpf49975.644ENSBTAG00000004571PRPF49775.644Bos_taurus
ENSCSEG00000020451prpf48946.389WBGene00007972prp-49146.578Caenorhabditis_elegans
ENSCSEG00000020451prpf49975.842ENSCJAG00000017856PRPF49775.842Callithrix_jacchus
ENSCSEG00000020451prpf49975.842ENSCAFG00000003224PRPF49475.842Canis_familiaris
ENSCSEG00000020451prpf49975.842ENSCAFG00020022637PRPF49775.842Canis_lupus_dingo
ENSCSEG00000020451prpf49975.644ENSCHIG00000024648-9775.644Capra_hircus
ENSCSEG00000020451prpf49975.644ENSTSYG00000010366PRPF49775.644Carlito_syrichta
ENSCSEG00000020451prpf48969.343ENSCAPG00000008935PRPF49569.268Cavia_aperea
ENSCSEG00000020451prpf49975.248ENSCPOG00000010747-9775.248Cavia_porcellus
ENSCSEG00000020451prpf49970.495ENSCPOG00000014729-9770.495Cavia_porcellus
ENSCSEG00000020451prpf49975.644ENSCCAG00000028990PRPF49775.644Cebus_capucinus
ENSCSEG00000020451prpf49975.842ENSCATG00000021552PRPF49775.842Cercocebus_atys
ENSCSEG00000020451prpf49975.644ENSCLAG00000013448PRPF49775.644Chinchilla_lanigera
ENSCSEG00000020451prpf48975.664ENSCHOG00000007233PRPF410075.664Choloepus_hoffmanni
ENSCSEG00000020451prpf410075.787ENSCPBG00000019136PRPF47375.787Chrysemys_picta_bellii
ENSCSEG00000020451prpf49760.404ENSCING00000001299-9560.404Ciona_intestinalis
ENSCSEG00000020451prpf49859.046ENSCSAVG00000009178-9960.345Ciona_savignyi
ENSCSEG00000020451prpf49975.842ENSCANG00000003246PRPF49775.842Colobus_angolensis_palliatus
ENSCSEG00000020451prpf49975.644ENSCGRG00001016992Prpf49775.644Cricetulus_griseus_chok1gshd
ENSCSEG00000020451prpf49975.644ENSCGRG00000017560Prpf49775.644Cricetulus_griseus_crigri
ENSCSEG00000020451prpf49980.000ENSDARG00000067639prpf49980.000Danio_rerio
ENSCSEG00000020451prpf49975.644ENSDNOG00000013203PRPF49775.644Dasypus_novemcinctus
ENSCSEG00000020451prpf49976.238ENSDORG00000026275Prpf49776.238Dipodomys_ordii
ENSCSEG00000020451prpf49949.002FBgn0036733U4-U6-60K9950.000Drosophila_melanogaster
ENSCSEG00000020451prpf49976.238ENSETEG00000020389PRPF49776.238Echinops_telfairi
ENSCSEG00000020451prpf49967.347ENSEBUG00000015229prpf48867.800Eptatretus_burgeri
ENSCSEG00000020451prpf49975.842ENSEASG00005022678PRPF49775.842Equus_asinus_asinus
ENSCSEG00000020451prpf49975.842ENSECAG00000007072PRPF49775.842Equus_caballus
ENSCSEG00000020451prpf48479.916ENSEEUG00000007480PRPF49659.864Erinaceus_europaeus
ENSCSEG00000020451prpf49981.151ENSELUG00000007510prpf49981.151Esox_lucius
ENSCSEG00000020451prpf49975.842ENSFCAG00000005514PRPF49775.842Felis_catus
ENSCSEG00000020451prpf49975.057ENSFALG00000005423PRPF48575.057Ficedula_albicollis
ENSCSEG00000020451prpf49975.644ENSFDAG00000005839PRPF49775.644Fukomys_damarensis
ENSCSEG00000020451prpf410088.039ENSFHEG00000001300prpf410088.039Fundulus_heteroclitus
ENSCSEG00000020451prpf49976.832ENSGALG00000008857PRPF49476.832Gallus_gallus
ENSCSEG00000020451prpf49481.155ENSGAFG00000012164prpf47081.155Gambusia_affinis
ENSCSEG00000020451prpf410079.134ENSGACG00000015476prpf410078.937Gasterosteus_aculeatus
ENSCSEG00000020451prpf410075.394ENSGAGG00000025029PRPF49475.394Gopherus_agassizii
ENSCSEG00000020451prpf49975.644ENSGGOG00000006943PRPF49775.644Gorilla_gorilla
ENSCSEG00000020451prpf410087.647ENSHBUG00000000562prpf410087.647Haplochromis_burtoni
ENSCSEG00000020451prpf49565.779ENSHGLG00000016628-9566.189Heterocephalus_glaber_female
ENSCSEG00000020451prpf49960.990ENSHGLG00000003838-9760.990Heterocephalus_glaber_female
ENSCSEG00000020451prpf49975.446ENSHGLG00000015191PRPF49775.446Heterocephalus_glaber_female
ENSCSEG00000020451prpf49960.990ENSHGLG00100005571-9760.990Heterocephalus_glaber_male
ENSCSEG00000020451prpf49980.000ENSIPUG00000017956PRPF49980.000Ictalurus_punctatus
ENSCSEG00000020451prpf49975.644ENSSTOG00000027833PRPF49775.644Ictidomys_tridecemlineatus
ENSCSEG00000020451prpf49975.644ENSJJAG00000008838Prpf49775.644Jaculus_jaculus
ENSCSEG00000020451prpf410085.882ENSKMAG00000013236prpf410085.882Kryptolebias_marmoratus
ENSCSEG00000020451prpf410088.780ENSLBEG00000020611prpf410088.780Labrus_bergylta
ENSCSEG00000020451prpf410071.373ENSLACG00000016317PRPF49771.373Latimeria_chalumnae
ENSCSEG00000020451prpf410079.921ENSLOCG00000000581prpf410079.921Lepisosteus_oculatus
ENSCSEG00000020451prpf49975.842ENSLAFG00000018225PRPF49775.842Loxodonta_africana
ENSCSEG00000020451prpf49975.644ENSMFAG00000039397PRPF49775.644Macaca_fascicularis
ENSCSEG00000020451prpf49975.842ENSMMUG00000005844PRPF49775.842Macaca_mulatta
ENSCSEG00000020451prpf49966.931ENSMNEG00000033737PRPF49766.931Macaca_nemestrina
ENSCSEG00000020451prpf49975.842ENSMLEG00000040284PRPF49775.842Mandrillus_leucophaeus
ENSCSEG00000020451prpf410087.451ENSMAMG00000020141prpf410087.451Mastacembelus_armatus
ENSCSEG00000020451prpf410087.451ENSMZEG00005023205prpf410087.451Maylandia_zebra
ENSCSEG00000020451prpf49976.238ENSMGAG00000001796PRPF49476.238Meleagris_gallopavo
ENSCSEG00000020451prpf49975.644ENSMAUG00000018022Prpf49775.644Mesocricetus_auratus
ENSCSEG00000020451prpf49975.740ENSMICG00000015022PRPF49775.740Microcebus_murinus
ENSCSEG00000020451prpf49975.248ENSMOCG00000018273Prpf49775.248Microtus_ochrogaster
ENSCSEG00000020451prpf410088.142ENSMMOG00000021177prpf410088.142Mola_mola
ENSCSEG00000020451prpf49974.653ENSMODG00000025096-9474.653Monodelphis_domestica
ENSCSEG00000020451prpf49975.050ENSMODG00000004444-9775.050Monodelphis_domestica
ENSCSEG00000020451prpf410088.627ENSMALG00000013624prpf410088.627Monopterus_albus
ENSCSEG00000020451prpf49975.644MGP_CAROLIEiJ_G0026078Prpf49775.644Mus_caroli
ENSCSEG00000020451prpf49975.644ENSMUSG00000066148Prpf49775.644Mus_musculus
ENSCSEG00000020451prpf49975.842MGP_PahariEiJ_G0028413Prpf49775.842Mus_pahari
ENSCSEG00000020451prpf49975.644MGP_SPRETEiJ_G0027042Prpf49775.644Mus_spretus
ENSCSEG00000020451prpf49975.842ENSMPUG00000007883PRPF49775.842Mustela_putorius_furo
ENSCSEG00000020451prpf49976.040ENSMLUG00000015309-9476.040Myotis_lucifugus
ENSCSEG00000020451prpf49974.653ENSMLUG00000008626-9474.653Myotis_lucifugus
ENSCSEG00000020451prpf49970.693ENSNGAG00000000468Prpf49770.693Nannospalax_galili
ENSCSEG00000020451prpf410087.647ENSNBRG00000007972prpf410087.647Neolamprologus_brichardi
ENSCSEG00000020451prpf49975.842ENSNLEG00000016647PRPF49775.842Nomascus_leucogenys
ENSCSEG00000020451prpf49974.851ENSMEUG00000013256PRPF49874.851Notamacropus_eugenii
ENSCSEG00000020451prpf49976.040ENSOPRG00000005302PRPF49776.040Ochotona_princeps
ENSCSEG00000020451prpf49975.644ENSODEG00000018147PRPF49775.644Octodon_degus
ENSCSEG00000020451prpf410087.451ENSONIG00000012671prpf410087.451Oreochromis_niloticus
ENSCSEG00000020451prpf49976.040ENSOCUG00000005046PRPF49776.040Oryctolagus_cuniculus
ENSCSEG00000020451prpf410086.166ENSORLG00000019641prpf410086.166Oryzias_latipes
ENSCSEG00000020451prpf410086.166ENSORLG00020019438prpf410086.166Oryzias_latipes_hni
ENSCSEG00000020451prpf410085.771ENSOMEG00000020941prpf410086.221Oryzias_melastigma
ENSCSEG00000020451prpf49971.881ENSOGAG00000007802PRPF49571.881Otolemur_garnettii
ENSCSEG00000020451prpf49975.644ENSOARG00000006319PRPF49475.644Ovis_aries
ENSCSEG00000020451prpf49975.644ENSPPAG00000041797PRPF49775.644Pan_paniscus
ENSCSEG00000020451prpf49975.842ENSPPRG00000014360PRPF49775.842Panthera_pardus
ENSCSEG00000020451prpf49975.842ENSPTIG00000009574PRPF49775.842Panthera_tigris_altaica
ENSCSEG00000020451prpf49975.644ENSPTRG00000021274PRPF49775.644Pan_troglodytes
ENSCSEG00000020451prpf49975.644ENSPANG00000025776PRPF49375.644Papio_anubis
ENSCSEG00000020451prpf410080.473ENSPKIG00000017259prpf410080.473Paramormyrops_kingsleyae
ENSCSEG00000020451prpf410075.787ENSPSIG00000010713PRPF48975.787Pelodiscus_sinensis
ENSCSEG00000020451prpf410062.639ENSPMGG00000000997prpf49864.126Periophthalmus_magnuspinnatus
ENSCSEG00000020451prpf49975.644ENSPEMG00000024115Prpf49775.644Peromyscus_maniculatus_bairdii
ENSCSEG00000020451prpf49975.050ENSPCIG00000003821PRPF49875.050Phascolarctos_cinereus
ENSCSEG00000020451prpf410078.988ENSPFOG00000013524prpf49981.155Poecilia_formosa
ENSCSEG00000020451prpf49379.692ENSPLAG00000011620prpf49977.812Poecilia_latipinna
ENSCSEG00000020451prpf49981.711ENSPMEG00000006813prpf410081.711Poecilia_mexicana
ENSCSEG00000020451prpf49975.842ENSPCAG00000002561PRPF49875.842Procavia_capensis
ENSCSEG00000020451prpf49975.842ENSPCOG00000011975PRPF49775.842Propithecus_coquereli
ENSCSEG00000020451prpf49972.673ENSPVAG00000004708PRPF49772.673Pteropus_vampyrus
ENSCSEG00000020451prpf410087.451ENSPNYG00000008013prpf410087.451Pundamilia_nyererei
ENSCSEG00000020451prpf49980.396ENSPNAG00000000697prpf49980.396Pygocentrus_nattereri
ENSCSEG00000020451prpf49975.446ENSRNOG00000014777Prpf49775.446Rattus_norvegicus
ENSCSEG00000020451prpf49975.842ENSRBIG00000040221PRPF49775.842Rhinopithecus_bieti
ENSCSEG00000020451prpf49975.842ENSRROG00000040240PRPF49775.842Rhinopithecus_roxellana
ENSCSEG00000020451prpf49975.050ENSSHAG00000017658PRPF49775.050Sarcophilus_harrisii
ENSCSEG00000020451prpf410080.906ENSSFOG00015008963prpf410080.906Scleropages_formosus
ENSCSEG00000020451prpf410086.863ENSSMAG00000008889prpf410086.863Scophthalmus_maximus
ENSCSEG00000020451prpf49987.164ENSSDUG00000022083prpf49487.371Seriola_dumerili
ENSCSEG00000020451prpf49987.578ENSSLDG00000008115prpf49487.785Seriola_lalandi_dorsalis
ENSCSEG00000020451prpf49976.331ENSSPUG00000015582PRPF49776.331Sphenodon_punctatus
ENSCSEG00000020451prpf410080.312ENSSPAG00000011286prpf410080.312Stegastes_partitus
ENSCSEG00000020451prpf49975.842ENSSSCG00000024648PRPF49775.842Sus_scrofa
ENSCSEG00000020451prpf49777.079ENSTGUG00000002623PRPF410077.301Taeniopygia_guttata
ENSCSEG00000020451prpf410087.033ENSTRUG00000008853prpf410087.033Takifugu_rubripes
ENSCSEG00000020451prpf410087.154ENSTNIG00000013250prpf410087.154Tetraodon_nigroviridis
ENSCSEG00000020451prpf49968.317ENSTBEG00000000821PRPF49768.317Tupaia_belangeri
ENSCSEG00000020451prpf48978.523ENSTTRG00000003246PRPF48578.523Tursiops_truncatus
ENSCSEG00000020451prpf47065.915ENSUAMG00000018288PRPF49665.915Ursus_americanus
ENSCSEG00000020451prpf49975.248ENSUMAG00000019375PRPF49775.248Ursus_maritimus
ENSCSEG00000020451prpf49975.446ENSVPAG00000005281PRPF49775.446Vicugna_pacos
ENSCSEG00000020451prpf49975.296ENSVVUG00000002476PRPF49975.296Vulpes_vulpes
ENSCSEG00000020451prpf47160.714ENSXCOG00000006101prpf49364.548Xiphophorus_couchianus
ENSCSEG00000020451prpf49171.398ENSXMAG00000002750prpf410073.529Xiphophorus_maculatus

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