EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000020504 (Gene tree)
Gene ID
103392513
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
10025 bases
Position
chr17:261599-271623
Accession
103392513
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000031958RRM_1PF00076.228e-3412
ENSCSEP00000031958RRM_1PF00076.228e-3422
ENSCSEP00000031955RRM_1PF00076.221.4e-3312
ENSCSEP00000031955RRM_1PF00076.221.4e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000032365-2070XM_008329134ENSCSEP00000031955491 (aa)XP_008327356UPI0004970EA9
ENSCSET00000032369-1326-ENSCSEP00000031958441 (aa)--
Gene Model
Click here to download ENSCSEG00000020504's gene model file
Pathways
Pathway IDPathway NameSource
csem03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020504's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000020504-7134.314ENSCSEG00000014845-5134.314
ENSCSEG00000020504-6474.627ENSCSEG00000018709u2af2a9971.154
ENSCSEG00000020504-6539.216ENSCSEG00000019887puf60b7139.216
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000020504-8878.894ENSG00000063244U2AF29981.046Homo_sapiens
ENSCSEG00000020504-6874.845ENSAPOG00000023155u2af2a9975.155Acanthochromis_polyacanthus
ENSCSEG00000020504-9491.631ENSAPOG00000002208-10091.416Acanthochromis_polyacanthus
ENSCSEG00000020504-7978.090ENSAMEG00000003864U2AF210072.330Ailuropoda_melanoleuca
ENSCSEG00000020504-9189.978ENSACIG00000014173-9989.760Amphilophus_citrinellus
ENSCSEG00000020504-8478.684ENSACIG00000005749u2af2a9975.000Amphilophus_citrinellus
ENSCSEG00000020504-8877.919ENSAOCG00000015571u2af2a10072.611Amphiprion_ocellaris
ENSCSEG00000020504-9492.060ENSAOCG00000003595-10091.845Amphiprion_ocellaris
ENSCSEG00000020504-8478.684ENSAPEG00000009376u2af2a9277.749Amphiprion_percula
ENSCSEG00000020504-9290.066ENSAPEG00000020062-9790.848Amphiprion_percula
ENSCSEG00000020504-9374.341ENSATEG00000022332u2af2a9971.762Anabas_testudineus
ENSCSEG00000020504-9191.778ENSATEG00000020577-9991.556Anabas_testudineus
ENSCSEG00000020504-9473.348ENSACAG00000015489U2AF29973.830Anolis_carolinensis
ENSCSEG00000020504-8480.000ENSANAG00000028042U2AF29980.000Aotus_nancymaae
ENSCSEG00000020504-9491.845ENSACLG00000020793-10091.631Astatotilapia_calliptera
ENSCSEG00000020504-8877.919ENSACLG00000022181u2af2a9975.000Astatotilapia_calliptera
ENSCSEG00000020504-9468.487ENSAMXG00000033347u2af2a9969.811Astyanax_mexicanus
ENSCSEG00000020504-9469.165ENSAMXG00000039454u2af2b9971.795Astyanax_mexicanus
ENSCSEG00000020504-8878.109ENSBTAG00000002830U2AF29974.304Bos_taurus
ENSCSEG00000020504-8955.190WBGene00006697uaf-110054.545Caenorhabditis_elegans
ENSCSEG00000020504-8878.109ENSCJAG00000017128U2AF29775.621Callithrix_jacchus
ENSCSEG00000020504-8878.894ENSCAFG00000002551U2AF29973.305Canis_familiaris
ENSCSEG00000020504-8878.894ENSCAFG00020015445U2AF29772.511Canis_lupus_dingo
ENSCSEG00000020504-8866.085ENSCHIG00000023595U2AF29563.387Capra_hircus
ENSCSEG00000020504-8878.109ENSTSYG00000007432U2AF29973.894Carlito_syrichta
ENSCSEG00000020504-8878.109ENSCAPG00000008466U2AF29972.867Cavia_aperea
ENSCSEG00000020504-8878.109ENSCPOG00000001582U2AF29972.689Cavia_porcellus
ENSCSEG00000020504-8878.109ENSCCAG00000023336U2AF29972.899Cebus_capucinus
ENSCSEG00000020504-8878.894ENSCATG00000004637U2AF29973.305Cercocebus_atys
ENSCSEG00000020504-8878.894ENSCLAG00000000596U2AF29973.305Chinchilla_lanigera
ENSCSEG00000020504-8878.894ENSCSAG00000001722U2AF29973.305Chlorocebus_sabaeus
ENSCSEG00000020504-8677.273ENSCPBG00000004485U2AF29981.046Chrysemys_picta_bellii
ENSCSEG00000020504-8669.610ENSCING00000003455-9364.286Ciona_intestinalis
ENSCSEG00000020504-8668.312ENSCSAVG00000006813-9563.844Ciona_savignyi
ENSCSEG00000020504-8972.030ENSCANG00000043845-9969.851Colobus_angolensis_palliatus
ENSCSEG00000020504-7978.933ENSCANG00000031002-9672.791Colobus_angolensis_palliatus
ENSCSEG00000020504-8875.126ENSCGRG00001007486-9969.280Cricetulus_griseus_chok1gshd
ENSCSEG00000020504-8878.109ENSCGRG00001003185-9974.304Cricetulus_griseus_chok1gshd
ENSCSEG00000020504-8875.126ENSCGRG00000018587-9969.280Cricetulus_griseus_crigri
ENSCSEG00000020504-5180.870ENSCGRG00000004524-7977.459Cricetulus_griseus_crigri
ENSCSEG00000020504-8877.834ENSCVAG00000001259u2af2a9972.611Cyprinodon_variegatus
ENSCSEG00000020504-9490.987ENSCVAG00000023307-10090.987Cyprinodon_variegatus
ENSCSEG00000020504-9373.747ENSDARG00000011740u2af2b9970.711Danio_rerio
ENSCSEG00000020504-9469.807ENSDARG00000012505u2af2a9969.807Danio_rerio
ENSCSEG00000020504-7978.933ENSDNOG00000047039U2AF29672.791Dasypus_novemcinctus
ENSCSEG00000020504-8878.109ENSDORG00000003250U2af29972.899Dipodomys_ordii
ENSCSEG00000020504-8671.134FBgn0005411U2af5010071.390Drosophila_melanogaster
ENSCSEG00000020504-9051.179FBgn0034834LS28553.708Drosophila_melanogaster
ENSCSEG00000020504-9370.843ENSEBUG00000010917U2AF210065.458Eptatretus_burgeri
ENSCSEG00000020504-8463.200ENSEBUG00000001732U2AF29660.789Eptatretus_burgeri
ENSCSEG00000020504-8878.643ENSEASG00005020708U2AF29073.246Equus_asinus_asinus
ENSCSEG00000020504-9472.103ENSECAG00000010110U2AF29974.304Equus_caballus
ENSCSEG00000020504-9486.910ENSELUG00000018459-10086.695Esox_lucius
ENSCSEG00000020504-9373.412ENSELUG00000015850u2af2a9970.625Esox_lucius
ENSCSEG00000020504-9372.792ENSELUG00000022291u2af2b9969.510Esox_lucius
ENSCSEG00000020504-8878.109ENSFCAG00000011504U2AF29972.899Felis_catus
ENSCSEG00000020504-8878.109ENSFDAG00000011264U2AF29971.064Fukomys_damarensis
ENSCSEG00000020504-8876.675ENSFHEG00000016025u2af2a9972.611Fundulus_heteroclitus
ENSCSEG00000020504-9469.017ENSGMOG00000004535u2af2a9971.215Gadus_morhua
ENSCSEG00000020504-9373.362ENSGALG00000052748U2AF26573.856Gallus_gallus
ENSCSEG00000020504-9487.284ENSGAFG00000005628-10088.578Gambusia_affinis
ENSCSEG00000020504-8877.834ENSGAFG00000013626u2af2a8872.399Gambusia_affinis
ENSCSEG00000020504-9470.021ENSGACG00000010632U2AF29971.795Gasterosteus_aculeatus
ENSCSEG00000020504-9384.928ENSGACG00000014500-10083.229Gasterosteus_aculeatus
ENSCSEG00000020504-6881.046ENSGAGG00000011849U2AF29981.046Gopherus_agassizii
ENSCSEG00000020504-5671.875ENSGGOG00000036399-9671.875Gorilla_gorilla
ENSCSEG00000020504-8877.919ENSHBUG00000013935u2af2a9975.000Haplochromis_burtoni
ENSCSEG00000020504-9491.845ENSHBUG00000017424-10091.631Haplochromis_burtoni
ENSCSEG00000020504-8878.109ENSHGLG00000005889U2AF29972.899Heterocephalus_glaber_female
ENSCSEG00000020504-8878.109ENSHGLG00100004757U2AF29972.867Heterocephalus_glaber_male
ENSCSEG00000020504-9372.642ENSHCOG00000019367u2af2a9969.958Hippocampus_comes
ENSCSEG00000020504-9469.593ENSIPUG00000009077u2af29971.368Ictalurus_punctatus
ENSCSEG00000020504-9468.298ENSIPUG00000007717u2af2a9968.737Ictalurus_punctatus
ENSCSEG00000020504-9683.908ENSIPUG00000009844-10081.466Ictalurus_punctatus
ENSCSEG00000020504-8878.109ENSSTOG00000019595U2AF29972.899Ictidomys_tridecemlineatus
ENSCSEG00000020504-8878.109ENSJJAG00000017705U2af29972.899Jaculus_jaculus
ENSCSEG00000020504-9374.580ENSKMAG00000005960u2af2a9974.483Kryptolebias_marmoratus
ENSCSEG00000020504-9188.235ENSLBEG00000005001-9988.017Labrus_bergylta
ENSCSEG00000020504-9374.580ENSLBEG00000016162u2af2a9972.611Labrus_bergylta
ENSCSEG00000020504-8180.055ENSLACG00000001648U2AF29980.055Latimeria_chalumnae
ENSCSEG00000020504-9486.052ENSLOCG00000010843-10086.538Lepisosteus_oculatus
ENSCSEG00000020504-6181.343ENSLOCG00000008050u2af2b9275.155Lepisosteus_oculatus
ENSCSEG00000020504-9767.401ENSLAFG00000028496-9966.596Loxodonta_africana
ENSCSEG00000020504-8878.894ENSLAFG00000018056-9973.305Loxodonta_africana
ENSCSEG00000020504-8878.109ENSMFAG00000038383U2AF29972.899Macaca_fascicularis
ENSCSEG00000020504-8877.861ENSMMUG00000004810U2AF29972.689Macaca_mulatta
ENSCSEG00000020504-8878.894ENSMNEG00000042096U2AF29775.621Macaca_nemestrina
ENSCSEG00000020504-8878.894ENSMLEG00000032219U2AF29470.478Mandrillus_leucophaeus
ENSCSEG00000020504-9489.056ENSMAMG00000020158-10088.841Mastacembelus_armatus
ENSCSEG00000020504-8876.750ENSMAMG00000019817u2af2a9972.998Mastacembelus_armatus
ENSCSEG00000020504-8877.919ENSMZEG00005016563u2af2a9972.399Maylandia_zebra
ENSCSEG00000020504-9491.845ENSMZEG00005023318-10091.631Maylandia_zebra
ENSCSEG00000020504-8878.109ENSMAUG00000008180U2af29972.103Mesocricetus_auratus
ENSCSEG00000020504-8878.894ENSMICG00000027681U2AF29874.330Microcebus_murinus
ENSCSEG00000020504-6878.758ENSMOCG00000001018-9978.758Microtus_ochrogaster
ENSCSEG00000020504-9669.195ENSMOCG00000007227-9966.949Microtus_ochrogaster
ENSCSEG00000020504-8878.109ENSMOCG00000013214-9972.899Microtus_ochrogaster
ENSCSEG00000020504-8684.925ENSMMOG00000000531-10075.258Mola_mola
ENSCSEG00000020504-8478.684ENSMMOG00000016600u2af2a9975.234Mola_mola
ENSCSEG00000020504-9374.880ENSMALG00000009985u2af2a9972.399Monopterus_albus
ENSCSEG00000020504-8878.894MGP_CAROLIEiJ_G0029150U2af29973.305Mus_caroli
ENSCSEG00000020504-8878.894ENSMUSG00000030435U2af29981.046Mus_musculus
ENSCSEG00000020504-8878.894MGP_PahariEiJ_G0021017U2af29973.305Mus_pahari
ENSCSEG00000020504-8878.894MGP_SPRETEiJ_G0030203U2af29973.305Mus_spretus
ENSCSEG00000020504-8878.894ENSMPUG00000007135U2AF29973.305Mustela_putorius_furo
ENSCSEG00000020504-5276.250ENSMLUG00000011051-9976.667Myotis_lucifugus
ENSCSEG00000020504-8878.109ENSNGAG00000020369U2af29972.899Nannospalax_galili
ENSCSEG00000020504-8877.919ENSNBRG00000002568u2af2a9975.000Neolamprologus_brichardi
ENSCSEG00000020504-9189.978ENSNBRG00000011100-9989.760Neolamprologus_brichardi
ENSCSEG00000020504-8869.802ENSNLEG00000010562U2AF29981.046Nomascus_leucogenys
ENSCSEG00000020504-8768.031ENSMEUG00000002346U2AF29963.576Notamacropus_eugenii
ENSCSEG00000020504-8872.388ENSODEG00000012729-9968.067Octodon_degus
ENSCSEG00000020504-9356.542ENSODEG00000009254-9956.427Octodon_degus
ENSCSEG00000020504-9375.656ENSONIG00000012793u2af2a9971.097Oreochromis_niloticus
ENSCSEG00000020504-9491.845ENSONIG00000009682-10091.631Oreochromis_niloticus
ENSCSEG00000020504-9374.580ENSORLG00000011545u2af2a9974.142Oryzias_latipes
ENSCSEG00000020504-9374.580ENSORLG00020006941u2af2a9974.142Oryzias_latipes_hni
ENSCSEG00000020504-9374.580ENSORLG00015012843u2af2a9971.670Oryzias_latipes_hsok
ENSCSEG00000020504-9374.580ENSOMEG00000011386u2af2a9974.596Oryzias_melastigma
ENSCSEG00000020504-8054.768ENSOGAG00000034729-7854.768Otolemur_garnettii
ENSCSEG00000020504-8878.109ENSOGAG00000007206-9972.899Otolemur_garnettii
ENSCSEG00000020504-8872.772ENSOARG00000001091U2AF29967.579Ovis_aries
ENSCSEG00000020504-8878.109ENSPPAG00000039782U2AF29972.899Pan_paniscus
ENSCSEG00000020504-8878.109ENSPPRG00000013843U2AF29972.899Panthera_pardus
ENSCSEG00000020504-8873.449ENSPTIG00000005489U2AF29966.953Panthera_tigris_altaica
ENSCSEG00000020504-8878.109ENSPTRG00000011523U2AF29981.046Pan_troglodytes
ENSCSEG00000020504-8878.894ENSPANG00000008459U2AF29973.305Papio_anubis
ENSCSEG00000020504-9076.790ENSPKIG00000024346u2af2b9975.058Paramormyrops_kingsleyae
ENSCSEG00000020504-9486.266ENSPKIG00000014878-10086.052Paramormyrops_kingsleyae
ENSCSEG00000020504-8859.658ENSPSIG00000008014U2AF29956.290Pelodiscus_sinensis
ENSCSEG00000020504-8471.795ENSPMGG00000022980u2af2a9968.315Periophthalmus_magnuspinnatus
ENSCSEG00000020504-8878.109ENSPEMG00000007378U2af29981.046Peromyscus_maniculatus_bairdii
ENSCSEG00000020504-8475.000ENSPMAG00000004097u2af2a10070.652Petromyzon_marinus
ENSCSEG00000020504-8878.109ENSPCIG00000018013U2AF29972.689Phascolarctos_cinereus
ENSCSEG00000020504-8877.834ENSPFOG00000010799u2af2a10072.187Poecilia_formosa
ENSCSEG00000020504-9488.362ENSPFOG00000006433-10089.009Poecilia_formosa
ENSCSEG00000020504-8877.834ENSPLAG00000014365u2af2a9972.611Poecilia_latipinna
ENSCSEG00000020504-8890.657ENSPLAG00000003275-9888.839Poecilia_latipinna
ENSCSEG00000020504-8891.162ENSPMEG00000003734-9888.393Poecilia_mexicana
ENSCSEG00000020504-8877.834ENSPMEG00000002969u2af2a9972.611Poecilia_mexicana
ENSCSEG00000020504-9489.700ENSPREG00000013036-10091.096Poecilia_reticulata
ENSCSEG00000020504-8877.834ENSPREG00000008739u2af2a9974.483Poecilia_reticulata
ENSCSEG00000020504-6079.562ENSPPYG00000010429-9479.927Pongo_abelii
ENSCSEG00000020504-9457.895ENSPCAG00000014399-9960.168Procavia_capensis
ENSCSEG00000020504-8769.898ENSPCAG00000003709-9669.821Procavia_capensis
ENSCSEG00000020504-8878.109ENSPCOG00000025870U2AF29874.330Propithecus_coquereli
ENSCSEG00000020504-8877.861ENSPVAG00000004540U2AF29972.689Pteropus_vampyrus
ENSCSEG00000020504-8877.919ENSPNYG00000001438u2af2a9975.000Pundamilia_nyererei
ENSCSEG00000020504-9491.845ENSPNYG00000011605-10091.631Pundamilia_nyererei
ENSCSEG00000020504-9470.085ENSPNAG00000017620u2af2a9970.576Pygocentrus_nattereri
ENSCSEG00000020504-9488.412ENSPNAG00000007182-10088.197Pygocentrus_nattereri
ENSCSEG00000020504-9469.807ENSPNAG00000027289u2af2b9972.436Pygocentrus_nattereri
ENSCSEG00000020504-8878.894ENSRNOG00000015914U2af29973.305Rattus_norvegicus
ENSCSEG00000020504-8878.358ENSRBIG00000041018U2AF29973.109Rhinopithecus_bieti
ENSCSEG00000020504-8874.121ENSRROG00000031238-9968.856Rhinopithecus_roxellana
ENSCSEG00000020504-8574.611ENSRROG00000031103-10072.464Rhinopithecus_roxellana
ENSCSEG00000020504-8878.894ENSSBOG00000023891U2AF29973.305Saimiri_boliviensis_boliviensis
ENSCSEG00000020504-5469.231ENSSHAG00000001167U2AF28558.981Sarcophilus_harrisii
ENSCSEG00000020504-8878.030ENSSFOG00015019182u2af2b8878.061Scleropages_formosus
ENSCSEG00000020504-9486.695ENSSFOG00015003884-10085.837Scleropages_formosus
ENSCSEG00000020504-9489.914ENSSMAG00000013779-10089.700Scophthalmus_maximus
ENSCSEG00000020504-9373.522ENSSMAG00000012582u2af2a9972.458Scophthalmus_maximus
ENSCSEG00000020504-9189.805ENSSDUG00000021434-9489.588Seriola_dumerili
ENSCSEG00000020504-8877.919ENSSDUG00000009457u2af2a10072.399Seriola_dumerili
ENSCSEG00000020504-9189.805ENSSLDG00000016151-9989.588Seriola_lalandi_dorsalis
ENSCSEG00000020504-8877.919ENSSLDG00000022742u2af2a9972.399Seriola_lalandi_dorsalis
ENSCSEG00000020504-8877.861ENSSPUG00000010229U2AF29972.632Sphenodon_punctatus
ENSCSEG00000020504-8877.919ENSSPAG00000022519u2af2a9971.975Stegastes_partitus
ENSCSEG00000020504-9491.845ENSSPAG00000005241-10091.631Stegastes_partitus
ENSCSEG00000020504-8878.894ENSSSCG00000034815U2AF29974.304Sus_scrofa
ENSCSEG00000020504-8478.400ENSTRUG00000005514u2af2a9873.672Takifugu_rubripes
ENSCSEG00000020504-8877.919ENSTNIG00000008106U2AF29971.915Tetraodon_nigroviridis
ENSCSEG00000020504-8887.657ENSTNIG00000011257-10084.368Tetraodon_nigroviridis
ENSCSEG00000020504-7975.419ENSTBEG00000009104U2AF29576.068Tupaia_belangeri
ENSCSEG00000020504-8878.109ENSTTRG00000000987U2AF29972.899Tursiops_truncatus
ENSCSEG00000020504-8878.643ENSUAMG00000019883U2AF29973.230Ursus_americanus
ENSCSEG00000020504-8878.643ENSUMAG00000024586U2AF29981.046Ursus_maritimus
ENSCSEG00000020504-8878.894ENSVVUG00000006956U2AF26676.310Vulpes_vulpes
ENSCSEG00000020504-9472.211ENSXETG00000019128u2af29973.109Xenopus_tropicalis
ENSCSEG00000020504-8478.947ENSXCOG00000019406u2af2a9974.483Xiphophorus_couchianus
ENSCSEG00000020504-8877.834ENSXMAG00000011979u2af2a9972.611Xiphophorus_maculatus
ENSCSEG00000020504-9886.831ENSXMAG00000000768-9987.654Xiphophorus_maculatus

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