EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000020530 (Gene tree)
Gene ID: -
Gene Symbol: fam83fa
Alias: -
Full Name: protein FAM83F-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 15285 bases
Position: chr17:324097-339381
Accession: 103392518
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000031996	FAM83	PF07894.12	9.9e-100	1	1
ENSCSEP00000032001	FAM83	PF07894.12	6e-58	1	1
ENSCSEP00000032004	FAM83	PF07894.12	2.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000032412	-	1239	-	ENSCSEP00000032001	412 (aa)	-	-
ENSCSET00000032407	-	1557	XM_008329139	ENSCSEP00000031996	518 (aa)	XP_008327361	-
ENSCSET00000032415	-	3335	-	ENSCSEP00000032004	366 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000020530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000020530	fam83fa	57	33.871	ENSCSEG00000009869	fam83d	53	36.594
ENSCSEG00000020530	fam83fa	69	64.054	ENSCSEG00000001431	fam83fb	71	64.054
ENSCSEG00000020530	fam83fa	54	32.542	ENSCSEG00000021696	-	70	32.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020530	fam83fa	99	75.568	ENSAPOG00000002100	fam83fa	97	74.953	Acanthochromis_polyacanthus
ENSCSEG00000020530	fam83fa	99	51.756	ENSAPOG00000013954	fam83fb	97	51.571	Acanthochromis_polyacanthus
ENSCSEG00000020530	fam83fa	54	38.246	ENSAPOG00000018052	fam83e	66	38.246	Acanthochromis_polyacanthus
ENSCSEG00000020530	fam83fa	50	58.173	ENSAPOG00000018240	-	73	57.895	Acanthochromis_polyacanthus
ENSCSEG00000020530	fam83fa	72	60.804	ENSACIG00000018205	fam83fb	82	63.636	Amphilophus_citrinellus
ENSCSEG00000020530	fam83fa	99	74.237	ENSACIG00000013934	fam83fa	98	73.473	Amphilophus_citrinellus
ENSCSEG00000020530	fam83fa	99	75.810	ENSAOCG00000001182	fam83fa	97	75.191	Amphiprion_ocellaris
ENSCSEG00000020530	fam83fa	98	52.799	ENSAOCG00000011974	fam83fb	96	52.425	Amphiprion_ocellaris
ENSCSEG00000020530	fam83fa	54	31.900	ENSAPEG00000003967	fam83e	59	31.900	Amphiprion_percula
ENSCSEG00000020530	fam83fa	99	52.680	ENSAPEG00000008303	fam83fb	97	52.311	Amphiprion_percula
ENSCSEG00000020530	fam83fa	99	75.810	ENSAPEG00000020202	fam83fa	97	75.191	Amphiprion_percula
ENSCSEG00000020530	fam83fa	99	76.762	ENSATEG00000020738	fam83fa	97	76.718	Anabas_testudineus
ENSCSEG00000020530	fam83fa	57	68.317	ENSATEG00000002522	fam83fb	63	68.317	Anabas_testudineus
ENSCSEG00000020530	fam83fa	58	36.446	ENSACLG00000015221	fam83e	60	39.502	Astatotilapia_calliptera
ENSCSEG00000020530	fam83fa	99	73.019	ENSACLG00000021073	fam83fa	97	72.642	Astatotilapia_calliptera
ENSCSEG00000020530	fam83fa	99	50.926	ENSACLG00000008136	fam83fb	97	50.746	Astatotilapia_calliptera
ENSCSEG00000020530	fam83fa	99	64.706	ENSAMXG00000013516	fam83fa	71	64.770	Astyanax_mexicanus
ENSCSEG00000020530	fam83fa	69	59.173	ENSAMXG00000032119	fam83fb	66	59.173	Astyanax_mexicanus
ENSCSEG00000020530	fam83fa	69	62.133	ENSCVAG00000011517	fam83fb	73	62.133	Cyprinodon_variegatus
ENSCSEG00000020530	fam83fa	99	74.476	ENSCVAG00000002014	fam83fa	97	74.476	Cyprinodon_variegatus
ENSCSEG00000020530	fam83fa	69	56.098	ENSDARG00000104188	fam83fb	100	49.780	Danio_rerio
ENSCSEG00000020530	fam83fa	62	36.310	ENSDARG00000089489	fam83e	51	36.310	Danio_rerio
ENSCSEG00000020530	fam83fa	99	58.541	ENSDARG00000038012	fam83fa	97	58.541	Danio_rerio
ENSCSEG00000020530	fam83fa	98	58.491	ENSELUG00000018573	fam83fa	97	58.491	Esox_lucius
ENSCSEG00000020530	fam83fa	58	33.657	ENSELUG00000023432	fam83e	50	33.657	Esox_lucius
ENSCSEG00000020530	fam83fa	99	54.360	ENSELUG00000020195	fam83fb	96	54.802	Esox_lucius
ENSCSEG00000020530	fam83fa	98	45.755	ENSFHEG00000008722	fam83fb	99	49.417	Fundulus_heteroclitus
ENSCSEG00000020530	fam83fa	99	71.374	ENSFHEG00000015048	fam83fa	97	71.374	Fundulus_heteroclitus
ENSCSEG00000020530	fam83fa	99	68.511	ENSGAFG00000016700	fam83fa	97	68.511	Gambusia_affinis
ENSCSEG00000020530	fam83fa	98	51.985	ENSGAFG00000011468	fam83fb	97	52.068	Gambusia_affinis
ENSCSEG00000020530	fam83fa	99	51.402	ENSHBUG00000009368	fam83fb	97	50.933	Haplochromis_burtoni
ENSCSEG00000020530	fam83fa	99	72.830	ENSHBUG00000017286	fam83fa	97	72.453	Haplochromis_burtoni
ENSCSEG00000020530	fam83fa	63	34.865	ENSHBUG00000003284	fam83e	73	34.865	Haplochromis_burtoni
ENSCSEG00000020530	fam83fa	57	37.540	ENSHCOG00000020513	fam83e	77	37.540	Hippocampus_comes
ENSCSEG00000020530	fam83fa	99	50.857	ENSHCOG00000009657	fam83fb	97	50.000	Hippocampus_comes
ENSCSEG00000020530	fam83fa	67	61.453	ENSIPUG00000017393	fam83fb	69	61.453	Ictalurus_punctatus
ENSCSEG00000020530	fam83fa	84	62.914	ENSIPUG00000013473	fam83fa	79	62.637	Ictalurus_punctatus
ENSCSEG00000020530	fam83fa	64	34.311	ENSIPUG00000003860	fam83e	52	34.311	Ictalurus_punctatus
ENSCSEG00000020530	fam83fa	99	69.450	ENSKMAG00000007053	fam83fa	93	69.450	Kryptolebias_marmoratus
ENSCSEG00000020530	fam83fa	69	62.667	ENSKMAG00000011443	fam83fb	73	62.667	Kryptolebias_marmoratus
ENSCSEG00000020530	fam83fa	99	51.504	ENSLBEG00000011997	fam83fb	97	51.215	Labrus_bergylta
ENSCSEG00000020530	fam83fa	98	70.962	ENSLBEG00000005198	fam83fa	97	70.992	Labrus_bergylta
ENSCSEG00000020530	fam83fa	99	50.735	ENSLOCG00000011357	fam83fb	97	51.287	Lepisosteus_oculatus
ENSCSEG00000020530	fam83fa	99	76.190	ENSMAMG00000020194	fam83fa	97	76.190	Mastacembelus_armatus
ENSCSEG00000020530	fam83fa	97	51.724	ENSMAMG00000004682	fam83fb	96	51.724	Mastacembelus_armatus
ENSCSEG00000020530	fam83fa	58	36.446	ENSMZEG00005014446	fam83e	67	39.502	Maylandia_zebra
ENSCSEG00000020530	fam83fa	99	73.019	ENSMZEG00005023302	fam83fa	97	72.642	Maylandia_zebra
ENSCSEG00000020530	fam83fa	99	50.926	ENSMZEG00005019183	fam83fb	97	50.746	Maylandia_zebra
ENSCSEG00000020530	fam83fa	99	50.657	ENSMMOG00000011136	fam83fb	98	50.936	Mola_mola
ENSCSEG00000020530	fam83fa	54	36.525	ENSMMOG00000010801	fam83e	58	36.525	Mola_mola
ENSCSEG00000020530	fam83fa	99	67.108	ENSMMOG00000021541	fam83fa	96	76.322	Mola_mola
ENSCSEG00000020530	fam83fa	54	37.063	ENSMALG00000003488	fam83e	69	37.063	Monopterus_albus
ENSCSEG00000020530	fam83fa	99	73.473	ENSMALG00000019513	fam83fa	100	73.473	Monopterus_albus
ENSCSEG00000020530	fam83fa	98	43.560	ENSMALG00000015816	fam83fb	73	60.753	Monopterus_albus
ENSCSEG00000020530	fam83fa	67	72.852	ENSNBRG00000011270	fam83fa	90	76.632	Neolamprologus_brichardi
ENSCSEG00000020530	fam83fa	52	39.502	ENSNBRG00000020386	fam83e	71	39.502	Neolamprologus_brichardi
ENSCSEG00000020530	fam83fa	98	45.727	ENSNBRG00000011999	fam83fb	97	48.268	Neolamprologus_brichardi
ENSCSEG00000020530	fam83fa	99	73.962	ENSONIG00000009702	fam83fa	97	73.962	Oreochromis_niloticus
ENSCSEG00000020530	fam83fa	61	57.895	ENSONIG00000016936	fam83fb	100	61.654	Oreochromis_niloticus
ENSCSEG00000020530	fam83fa	99	50.000	ENSORLG00000010844	fam83fb	97	51.224	Oryzias_latipes
ENSCSEG00000020530	fam83fa	99	70.667	ENSORLG00000001401	fam83fa	97	70.667	Oryzias_latipes
ENSCSEG00000020530	fam83fa	99	70.476	ENSORLG00020013985	fam83fa	97	70.476	Oryzias_latipes_hni
ENSCSEG00000020530	fam83fa	99	50.570	ENSORLG00020007895	fam83fb	97	51.402	Oryzias_latipes_hni
ENSCSEG00000020530	fam83fa	99	50.568	ENSORLG00015007142	fam83fb	97	51.321	Oryzias_latipes_hsok
ENSCSEG00000020530	fam83fa	99	70.286	ENSORLG00015007009	fam83fa	97	70.476	Oryzias_latipes_hsok
ENSCSEG00000020530	fam83fa	54	37.193	ENSORLG00015016008	fam83e	68	37.193	Oryzias_latipes_hsok
ENSCSEG00000020530	fam83fa	99	69.905	ENSOMEG00000017221	fam83fa	97	70.095	Oryzias_melastigma
ENSCSEG00000020530	fam83fa	99	49.338	ENSOMEG00000015967	fam83fb	96	49.338	Oryzias_melastigma
ENSCSEG00000020530	fam83fa	99	48.767	ENSPKIG00000013672	fam83fb	97	48.855	Paramormyrops_kingsleyae
ENSCSEG00000020530	fam83fa	54	35.906	ENSPKIG00000013011	-	59	33.143	Paramormyrops_kingsleyae
ENSCSEG00000020530	fam83fa	99	55.303	ENSPKIG00000003519	fam83fa	97	55.303	Paramormyrops_kingsleyae
ENSCSEG00000020530	fam83fa	99	57.785	ENSPMGG00000011794	fam83fa	98	57.785	Periophthalmus_magnuspinnatus
ENSCSEG00000020530	fam83fa	58	33.544	ENSPMGG00000023523	fam83e	69	33.544	Periophthalmus_magnuspinnatus
ENSCSEG00000020530	fam83fa	99	68.130	ENSPFOG00000007236	fam83fa	97	68.130	Poecilia_formosa
ENSCSEG00000020530	fam83fa	98	51.429	ENSPFOG00000014672	fam83fb	90	62.782	Poecilia_formosa
ENSCSEG00000020530	fam83fa	98	51.429	ENSPLAG00000002530	-	97	51.429	Poecilia_latipinna
ENSCSEG00000020530	fam83fa	99	68.000	ENSPLAG00000010997	fam83fa	97	68.571	Poecilia_latipinna
ENSCSEG00000020530	fam83fa	99	68.702	ENSPMEG00000018863	fam83fa	97	68.702	Poecilia_mexicana
ENSCSEG00000020530	fam83fa	69	63.342	ENSPMEG00000020267	fam83fb	73	63.342	Poecilia_mexicana
ENSCSEG00000020530	fam83fa	99	61.758	ENSPREG00000012779	fam83fa	96	61.758	Poecilia_reticulata
ENSCSEG00000020530	fam83fa	98	51.136	ENSPREG00000000170	fam83fb	97	50.758	Poecilia_reticulata
ENSCSEG00000020530	fam83fa	63	34.595	ENSPNYG00000017820	fam83e	78	34.595	Pundamilia_nyererei
ENSCSEG00000020530	fam83fa	99	51.402	ENSPNYG00000015309	fam83fb	99	50.933	Pundamilia_nyererei
ENSCSEG00000020530	fam83fa	99	72.642	ENSPNYG00000011832	fam83fa	97	72.264	Pundamilia_nyererei
ENSCSEG00000020530	fam83fa	71	59.788	ENSPNAG00000024206	fam83fb	74	59.788	Pygocentrus_nattereri
ENSCSEG00000020530	fam83fa	99	57.356	ENSPNAG00000026031	fam83fa	86	57.463	Pygocentrus_nattereri
ENSCSEG00000020530	fam83fa	99	59.924	ENSSFOG00015010079	fam83f	98	59.735	Scleropages_formosus
ENSCSEG00000020530	fam83fa	67	52.846	ENSSFOG00015023820	fam83fb	97	46.247	Scleropages_formosus
ENSCSEG00000020530	fam83fa	99	72.952	ENSSMAG00000013899	fam83fa	97	73.092	Scophthalmus_maximus
ENSCSEG00000020530	fam83fa	99	52.700	ENSSMAG00000021148	fam83fb	97	52.700	Scophthalmus_maximus
ENSCSEG00000020530	fam83fa	54	36.491	ENSSMAG00000015122	fam83e	72	36.491	Scophthalmus_maximus
ENSCSEG00000020530	fam83fa	99	77.143	ENSSDUG00000023214	fam83fa	97	77.143	Seriola_dumerili
ENSCSEG00000020530	fam83fa	97	50.187	ENSSDUG00000012069	fam83fb	96	50.187	Seriola_dumerili
ENSCSEG00000020530	fam83fa	99	76.762	ENSSLDG00000006950	fam83fa	97	76.762	Seriola_lalandi_dorsalis
ENSCSEG00000020530	fam83fa	98	49.254	ENSSLDG00000020926	fam83fb	96	49.813	Seriola_lalandi_dorsalis
ENSCSEG00000020530	fam83fa	99	52.778	ENSSPAG00000004922	fam83fb	97	52.778	Stegastes_partitus
ENSCSEG00000020530	fam83fa	50	32.155	ENSSPAG00000007129	fam83e	65	32.155	Stegastes_partitus
ENSCSEG00000020530	fam83fa	99	75.758	ENSSPAG00000004902	fam83fa	97	75.712	Stegastes_partitus
ENSCSEG00000020530	fam83fa	99	50.093	ENSTRUG00000012517	fam83fb	88	50.654	Takifugu_rubripes
ENSCSEG00000020530	fam83fa	99	69.492	ENSTRUG00000024905	fam83fa	97	69.868	Takifugu_rubripes
ENSCSEG00000020530	fam83fa	59	69.811	ENSTNIG00000011260	fam83fa	87	73.962	Tetraodon_nigroviridis
ENSCSEG00000020530	fam83fa	69	57.979	ENSTNIG00000018819	fam83fb	89	57.979	Tetraodon_nigroviridis
ENSCSEG00000020530	fam83fa	53	32.862	ENSXCOG00000013498	fam83e	63	32.862	Xiphophorus_couchianus
ENSCSEG00000020530	fam83fa	98	52.462	ENSXCOG00000015914	fam83fb	99	51.326	Xiphophorus_couchianus
ENSCSEG00000020530	fam83fa	98	52.166	ENSXMAG00000010041	fam83fb	99	51.977	Xiphophorus_maculatus
ENSCSEG00000020530	fam83fa	99	67.742	ENSXMAG00000024063	fam83fa	97	67.742	Xiphophorus_maculatus