EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000020586 (Gene tree)
Gene ID: 103392528
Gene Symbol: tsen54
Alias: zgc:109927
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 11811 bases
Position: chr17:431982-443792
Accession: 103392528
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000032064	tRNA_int_end_N2	PF12928.7	2.3e-07	1	1
ENSCSEP00000032067	tRNA_int_end_N2	PF12928.7	2.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000032485	-	1471	-	ENSCSEP00000032067	415 (aa)	-	UPI0004978ACA
ENSCSET00000032489	-	1418	-	ENSCSEP00000032071	418 (aa)	-	-
ENSCSET00000032482	-	2910	XM_008329151	ENSCSEP00000032064	415 (aa)	XP_008327373	UPI0004978ACA

Gene Model

Click here to download ENSCSEG00000020586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020586	tsen54	99	39.030	ENSG00000182173	TSEN54	100	63.889	Homo_sapiens
ENSCSEG00000020586	tsen54	99	61.151	ENSAPOG00000009659	tsen54	99	61.151	Acanthochromis_polyacanthus
ENSCSEG00000020586	tsen54	99	37.844	ENSAMEG00000009414	TSEN54	81	38.584	Ailuropoda_melanoleuca
ENSCSEG00000020586	tsen54	99	60.432	ENSAOCG00000000152	tsen54	79	60.432	Amphiprion_ocellaris
ENSCSEG00000020586	tsen54	99	60.432	ENSAPEG00000018931	tsen54	79	60.432	Amphiprion_percula
ENSCSEG00000020586	tsen54	99	58.701	ENSATEG00000019860	tsen54	81	58.933	Anabas_testudineus
ENSCSEG00000020586	tsen54	99	39.675	ENSAPLG00000009419	TSEN54	94	39.675	Anas_platyrhynchos
ENSCSEG00000020586	tsen54	99	38.568	ENSACAG00000006714	TSEN54	81	38.940	Anolis_carolinensis
ENSCSEG00000020586	tsen54	99	38.498	ENSANAG00000024061	TSEN54	80	39.631	Aotus_nancymaae
ENSCSEG00000020586	tsen54	99	56.368	ENSACLG00000019800	tsen54	80	56.368	Astatotilapia_calliptera
ENSCSEG00000020586	tsen54	99	49.406	ENSAMXG00000006546	tsen54	80	49.406	Astyanax_mexicanus
ENSCSEG00000020586	tsen54	76	64.706	ENSBTAG00000000824	TSEN54	80	37.875	Bos_taurus
ENSCSEG00000020586	tsen54	99	38.732	ENSCJAG00000014278	TSEN54	80	40.323	Callithrix_jacchus
ENSCSEG00000020586	tsen54	99	37.020	ENSCAFG00000004798	TSEN54	81	38.249	Canis_familiaris
ENSCSEG00000020586	tsen54	99	37.020	ENSCAFG00020000312	TSEN54	81	38.249	Canis_lupus_dingo
ENSCSEG00000020586	tsen54	99	36.697	ENSCHIG00000019908	TSEN54	80	37.844	Capra_hircus
ENSCSEG00000020586	tsen54	99	38.462	ENSTSYG00000037439	TSEN54	94	39.394	Carlito_syrichta
ENSCSEG00000020586	tsen54	99	39.486	ENSCCAG00000036624	TSEN54	80	39.862	Cebus_capucinus
ENSCSEG00000020586	tsen54	99	39.723	ENSCATG00000042877	TSEN54	80	39.723	Cercocebus_atys
ENSCSEG00000020586	tsen54	99	39.437	ENSCLAG00000002924	TSEN54	80	39.437	Chinchilla_lanigera
ENSCSEG00000020586	tsen54	99	38.732	ENSCSAG00000004809	TSEN54	80	39.492	Chlorocebus_sabaeus
ENSCSEG00000020586	tsen54	99	39.545	ENSCPBG00000028071	TSEN54	82	39.545	Chrysemys_picta_bellii
ENSCSEG00000020586	tsen54	99	39.954	ENSCANG00000028053	TSEN54	80	39.954	Colobus_angolensis_palliatus
ENSCSEG00000020586	tsen54	99	37.915	ENSCGRG00001020029	Tsen54	80	37.915	Cricetulus_griseus_chok1gshd
ENSCSEG00000020586	tsen54	99	37.915	ENSCGRG00000016289	Tsen54	95	37.915	Cricetulus_griseus_crigri
ENSCSEG00000020586	tsen54	99	50.483	ENSDARG00000036844	tsen54	100	51.675	Danio_rerio
ENSCSEG00000020586	tsen54	99	37.273	ENSDNOG00000018452	TSEN54	81	38.864	Dasypus_novemcinctus
ENSCSEG00000020586	tsen54	99	38.679	ENSDORG00000004073	Tsen54	80	39.578	Dipodomys_ordii
ENSCSEG00000020586	tsen54	99	38.426	ENSEASG00005000579	TSEN54	81	38.426	Equus_asinus_asinus
ENSCSEG00000020586	tsen54	99	38.194	ENSECAG00000004924	TSEN54	81	38.194	Equus_caballus
ENSCSEG00000020586	tsen54	99	37.963	ENSEEUG00000008467	TSEN54	94	38.889	Erinaceus_europaeus
ENSCSEG00000020586	tsen54	99	49.663	ENSELUG00000017703	tsen54	75	49.663	Esox_lucius
ENSCSEG00000020586	tsen54	99	37.269	ENSFCAG00000023712	TSEN54	81	38.194	Felis_catus
ENSCSEG00000020586	tsen54	99	39.723	ENSFALG00000001119	TSEN54	80	40.654	Ficedula_albicollis
ENSCSEG00000020586	tsen54	99	39.151	ENSFDAG00000019090	TSEN54	93	39.720	Fukomys_damarensis
ENSCSEG00000020586	tsen54	99	56.563	ENSFHEG00000005470	tsen54	80	57.041	Fundulus_heteroclitus
ENSCSEG00000020586	tsen54	79	55.000	ENSGMOG00000013146	tsen54	80	55.000	Gadus_morhua
ENSCSEG00000020586	tsen54	99	37.644	ENSGALG00000047163	TSEN54	84	37.644	Gallus_gallus
ENSCSEG00000020586	tsen54	99	55.072	ENSGAFG00000005111	tsen54	80	55.556	Gambusia_affinis
ENSCSEG00000020586	tsen54	99	53.222	ENSGACG00000014987	tsen54	82	53.222	Gasterosteus_aculeatus
ENSCSEG00000020586	tsen54	99	39.907	ENSGAGG00000006825	TSEN54	80	39.907	Gopherus_agassizii
ENSCSEG00000020586	tsen54	99	39.030	ENSGGOG00000009417	TSEN54	83	39.492	Gorilla_gorilla
ENSCSEG00000020586	tsen54	97	49.515	ENSHBUG00000018296	tsen54	99	49.515	Haplochromis_burtoni
ENSCSEG00000020586	tsen54	99	38.915	ENSHGLG00000007979	TSEN54	80	38.915	Heterocephalus_glaber_female
ENSCSEG00000020586	tsen54	99	38.915	ENSHGLG00100005497	TSEN54	80	38.915	Heterocephalus_glaber_male
ENSCSEG00000020586	tsen54	99	56.386	ENSHCOG00000007481	tsen54	99	56.386	Hippocampus_comes
ENSCSEG00000020586	tsen54	99	45.972	ENSIPUG00000000590	tsen54	80	45.972	Ictalurus_punctatus
ENSCSEG00000020586	tsen54	99	38.771	ENSSTOG00000012883	TSEN54	80	38.771	Ictidomys_tridecemlineatus
ENSCSEG00000020586	tsen54	99	39.261	ENSJJAG00000007365	Tsen54	80	39.261	Jaculus_jaculus
ENSCSEG00000020586	tsen54	99	57.506	ENSKMAG00000006944	tsen54	81	57.506	Kryptolebias_marmoratus
ENSCSEG00000020586	tsen54	99	53.191	ENSLBEG00000004199	tsen54	81	53.901	Labrus_bergylta
ENSCSEG00000020586	tsen54	99	37.071	ENSLACG00000009497	TSEN54	83	37.071	Latimeria_chalumnae
ENSCSEG00000020586	tsen54	99	43.964	ENSLOCG00000011191	tsen54	81	44.647	Lepisosteus_oculatus
ENSCSEG00000020586	tsen54	99	38.588	ENSLAFG00000011655	TSEN54	80	39.529	Loxodonta_africana
ENSCSEG00000020586	tsen54	99	39.211	ENSMFAG00000000712	TSEN54	80	39.954	Macaca_fascicularis
ENSCSEG00000020586	tsen54	99	39.211	ENSMNEG00000029199	TSEN54	80	39.954	Macaca_nemestrina
ENSCSEG00000020586	tsen54	99	38.732	ENSMLEG00000044168	TSEN54	82	39.723	Mandrillus_leucophaeus
ENSCSEG00000020586	tsen54	99	60.241	ENSMAMG00000019773	tsen54	80	60.723	Mastacembelus_armatus
ENSCSEG00000020586	tsen54	99	56.132	ENSMZEG00005000884	tsen54	80	56.132	Maylandia_zebra
ENSCSEG00000020586	tsen54	99	38.140	ENSMGAG00000009556	TSEN54	81	37.701	Meleagris_gallopavo
ENSCSEG00000020586	tsen54	99	38.915	ENSMAUG00000016838	Tsen54	80	38.915	Mesocricetus_auratus
ENSCSEG00000020586	tsen54	99	38.443	ENSMICG00000044012	TSEN54	80	39.623	Microcebus_murinus
ENSCSEG00000020586	tsen54	99	39.243	ENSMOCG00000021585	Tsen54	80	39.243	Microtus_ochrogaster
ENSCSEG00000020586	tsen54	99	50.000	ENSMMOG00000020189	tsen54	81	51.435	Mola_mola
ENSCSEG00000020586	tsen54	99	36.674	ENSMODG00000007438	TSEN54	79	36.674	Monodelphis_domestica
ENSCSEG00000020586	tsen54	100	59.059	ENSMALG00000020573	tsen54	81	59.338	Monopterus_albus
ENSCSEG00000020586	tsen54	99	38.283	MGP_CAROLIEiJ_G0017417	Tsen54	80	38.283	Mus_caroli
ENSCSEG00000020586	tsen54	99	38.515	ENSMUSG00000020781	Tsen54	80	38.515	Mus_musculus
ENSCSEG00000020586	tsen54	99	39.171	MGP_PahariEiJ_G0018547	Tsen54	80	39.171	Mus_pahari
ENSCSEG00000020586	tsen54	99	38.283	MGP_SPRETEiJ_G0018262	Tsen54	80	38.283	Mus_spretus
ENSCSEG00000020586	tsen54	99	35.499	ENSMPUG00000013870	TSEN54	81	36.427	Mustela_putorius_furo
ENSCSEG00000020586	tsen54	99	39.904	ENSMLUG00000015298	TSEN54	81	40.865	Myotis_lucifugus
ENSCSEG00000020586	tsen54	99	38.369	ENSNGAG00000015673	Tsen54	80	38.369	Nannospalax_galili
ENSCSEG00000020586	tsen54	99	35.198	ENSMEUG00000011908	TSEN54	91	35.198	Notamacropus_eugenii
ENSCSEG00000020586	tsen54	99	35.349	ENSOPRG00000012513	TSEN54	80	35.349	Ochotona_princeps
ENSCSEG00000020586	tsen54	99	56.941	ENSONIG00000009543	tsen54	81	56.941	Oreochromis_niloticus
ENSCSEG00000020586	tsen54	99	38.283	ENSOCUG00000009875	TSEN54	78	38.462	Oryctolagus_cuniculus
ENSCSEG00000020586	tsen54	99	53.125	ENSORLG00000000852	tsen54	80	53.125	Oryzias_latipes
ENSCSEG00000020586	tsen54	99	53.140	ENSORLG00020018221	tsen54	89	53.140	Oryzias_latipes_hni
ENSCSEG00000020586	tsen54	99	52.278	ENSORLG00015009413	tsen54	68	67.925	Oryzias_latipes_hsok
ENSCSEG00000020586	tsen54	99	55.769	ENSOMEG00000014402	tsen54	77	55.769	Oryzias_melastigma
ENSCSEG00000020586	tsen54	99	37.232	ENSOGAG00000001442	TSEN54	80	37.232	Otolemur_garnettii
ENSCSEG00000020586	tsen54	99	37.442	ENSOARG00000010361	TSEN54	94	37.875	Ovis_aries
ENSCSEG00000020586	tsen54	99	39.583	ENSPPAG00000043519	TSEN54	85	39.583	Pan_paniscus
ENSCSEG00000020586	tsen54	99	37.731	ENSPPRG00000009162	TSEN54	81	38.657	Panthera_pardus
ENSCSEG00000020586	tsen54	99	38.084	ENSPTIG00000019312	TSEN54	90	39.019	Panthera_tigris_altaica
ENSCSEG00000020586	tsen54	99	39.261	ENSPTRG00000009646	TSEN54	80	39.723	Pan_troglodytes
ENSCSEG00000020586	tsen54	99	38.979	ENSPANG00000020133	TSEN54	80	39.723	Papio_anubis
ENSCSEG00000020586	tsen54	99	47.837	ENSPKIG00000023018	tsen54	99	47.837	Paramormyrops_kingsleyae
ENSCSEG00000020586	tsen54	99	39.261	ENSPSIG00000012807	TSEN54	100	39.261	Pelodiscus_sinensis
ENSCSEG00000020586	tsen54	99	40.143	ENSPMGG00000019578	tsen54	85	40.143	Periophthalmus_magnuspinnatus
ENSCSEG00000020586	tsen54	99	39.211	ENSPEMG00000014857	Tsen54	80	39.540	Peromyscus_maniculatus_bairdii
ENSCSEG00000020586	tsen54	99	55.502	ENSPFOG00000022740	tsen54	80	55.502	Poecilia_formosa
ENSCSEG00000020586	tsen54	99	55.797	ENSPLAG00000014847	tsen54	80	55.797	Poecilia_latipinna
ENSCSEG00000020586	tsen54	99	55.556	ENSPMEG00000022876	tsen54	80	55.556	Poecilia_mexicana
ENSCSEG00000020586	tsen54	99	56.039	ENSPREG00000013090	tsen54	80	56.039	Poecilia_reticulata
ENSCSEG00000020586	tsen54	99	39.329	ENSPPYG00000008629	TSEN54	87	40.723	Pongo_abelii
ENSCSEG00000020586	tsen54	94	34.878	ENSPCAG00000002093	TSEN54	79	35.680	Procavia_capensis
ENSCSEG00000020586	tsen54	99	37.850	ENSPCOG00000027880	TSEN54	81	39.019	Propithecus_coquereli
ENSCSEG00000020586	tsen54	99	38.095	ENSPVAG00000008446	TSEN54	81	38.813	Pteropus_vampyrus
ENSCSEG00000020586	tsen54	99	57.007	ENSPNYG00000010217	tsen54	99	54.177	Pundamilia_nyererei
ENSCSEG00000020586	tsen54	99	49.052	ENSPNAG00000003770	tsen54	81	49.289	Pygocentrus_nattereri
ENSCSEG00000020586	tsen54	99	38.657	ENSRNOG00000004598	Tsen54	80	38.657	Rattus_norvegicus
ENSCSEG00000020586	tsen54	99	40.185	ENSRBIG00000043040	TSEN54	80	40.185	Rhinopithecus_bieti
ENSCSEG00000020586	tsen54	99	40.185	ENSRROG00000030797	TSEN54	80	40.185	Rhinopithecus_roxellana
ENSCSEG00000020586	tsen54	99	35.915	ENSSBOG00000013543	TSEN54	79	36.866	Saimiri_boliviensis_boliviensis
ENSCSEG00000020586	tsen54	99	37.443	ENSSHAG00000018127	TSEN54	80	37.443	Sarcophilus_harrisii
ENSCSEG00000020586	tsen54	99	46.209	ENSSFOG00015004093	tsen54	99	46.682	Scleropages_formosus
ENSCSEG00000020586	tsen54	99	56.706	ENSSMAG00000012449	tsen54	96	57.176	Scophthalmus_maximus
ENSCSEG00000020586	tsen54	99	62.233	ENSSDUG00000021506	tsen54	81	62.233	Seriola_dumerili
ENSCSEG00000020586	tsen54	99	62.470	ENSSLDG00000016303	tsen54	81	62.470	Seriola_lalandi_dorsalis
ENSCSEG00000020586	tsen54	79	34.694	ENSSPUG00000008988	TSEN54	77	34.694	Sphenodon_punctatus
ENSCSEG00000020586	tsen54	99	58.753	ENSSPAG00000008047	tsen54	99	58.753	Stegastes_partitus
ENSCSEG00000020586	tsen54	99	61.631	ENSSPAG00000008098	-	99	58.753	Stegastes_partitus
ENSCSEG00000020586	tsen54	99	38.215	ENSSSCG00000036852	TSEN54	90	39.070	Sus_scrofa
ENSCSEG00000020586	tsen54	99	40.421	ENSTGUG00000008548	TSEN54	94	40.421	Taeniopygia_guttata
ENSCSEG00000020586	tsen54	99	55.422	ENSTRUG00000004230	tsen54	80	55.663	Takifugu_rubripes
ENSCSEG00000020586	tsen54	99	51.449	ENSTNIG00000011281	tsen54	81	51.643	Tetraodon_nigroviridis
ENSCSEG00000020586	tsen54	99	36.721	ENSTTRG00000015828	TSEN54	94	38.018	Tursiops_truncatus
ENSCSEG00000020586	tsen54	99	38.073	ENSUAMG00000010045	TSEN54	99	39.041	Ursus_americanus
ENSCSEG00000020586	tsen54	99	38.073	ENSUMAG00000008979	TSEN54	99	38.813	Ursus_maritimus
ENSCSEG00000020586	tsen54	99	37.020	ENSVVUG00000011411	TSEN54	82	38.249	Vulpes_vulpes
ENSCSEG00000020586	tsen54	99	39.720	ENSXETG00000012532	tsen54	63	62.857	Xenopus_tropicalis
ENSCSEG00000020586	tsen54	99	52.732	ENSXCOG00000018245	tsen54	99	52.732	Xiphophorus_couchianus
ENSCSEG00000020586	tsen54	99	56.039	ENSXMAG00000018818	tsen54	80	56.039	Xiphophorus_maculatus