EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSEG00000020606 (Gene tree)
Gene ID
103392531
Gene Symbol
RBFOX3 (1 of many)
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding protein fox-1 homolog 3-like
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Minus strand
Length
39663 bases
Position
chr17:507314-546976
Accession
103392531
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000032101Fox-1_CPF12414.83.2e-3011
ENSCSEP00000032100Fox-1_CPF12414.83.5e-3011
ENSCSEP00000032097Fox-1_CPF12414.83.8e-3011
ENSCSEP00000032101RRM_1PF00076.221.8e-1811
ENSCSEP00000032100RRM_1PF00076.222e-1811
ENSCSEP00000032097RRM_1PF00076.222.1e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000032515RBFOX3 (1 of many)-2016208-ENSCSEP00000032097377 (aa)--
ENSCSET00000032518RBFOX3 (1 of many)-2026152XM_008329157ENSCSEP00000032100362 (aa)XP_008327379UPI0004956A8D
ENSCSET00000032519RBFOX3 (1 of many)-2036071-ENSCSEP00000032101335 (aa)--
Gene Model
Click here to download ENSCSEG00000020606's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020606's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSEG00000020606RBFOX36355.390ENSCSEG00000007748rbfox25955.594
ENSCSEG00000020606RBFOX36366.964ENSCSEG00000018898rbfox1l7358.065
ENSCSEG00000020606RBFOX38560.811ENSCSEG00000008840rbfox18959.226
ENSCSEG00000020606RBFOX36362.097ENSCSEG00000007360-6060.072
ENSCSEG00000020606RBFOX310063.612ENSCSEG00000015567RBFOX39865.684
ENSCSEG00000020606RBFOX35234.615ENSCSEG00000021295pabpc1l6434.615
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000020606RBFOX38367.133ENSG00000167281RBFOX310066.562Homo_sapiens
ENSCSEG00000020606RBFOX310076.965ENSAPOG00000021630rbfox3b10077.778Acanthochromis_polyacanthus
ENSCSEG00000020606RBFOX310059.155ENSAPOG00000015658-9160.674Acanthochromis_polyacanthus
ENSCSEG00000020606RBFOX38363.487ENSAMEG00000014170RBFOX38861.782Ailuropoda_melanoleuca
ENSCSEG00000020606RBFOX38773.826ENSACIG00000010817rbfox3b9973.968Amphilophus_citrinellus
ENSCSEG00000020606RBFOX38957.862ENSACIG00000003768-9058.841Amphilophus_citrinellus
ENSCSEG00000020606RBFOX310076.965ENSAOCG00000012358rbfox3b10077.778Amphiprion_ocellaris
ENSCSEG00000020606RBFOX310062.264ENSAOCG00000010786-9865.147Amphiprion_ocellaris
ENSCSEG00000020606RBFOX310070.380ENSAPEG00000019081rbfox3b9971.196Amphiprion_percula
ENSCSEG00000020606RBFOX39255.525ENSAPEG00000015891-8959.229Amphiprion_percula
ENSCSEG00000020606RBFOX38768.902ENSATEG00000019945rbfox3b9970.145Anabas_testudineus
ENSCSEG00000020606RBFOX38769.435ENSATEG00000023101-9868.000Anabas_testudineus
ENSCSEG00000020606RBFOX39864.641ENSACAG00000016093RBFOX310066.022Anolis_carolinensis
ENSCSEG00000020606RBFOX38366.434ENSANAG00000023457RBFOX310066.246Aotus_nancymaae
ENSCSEG00000020606RBFOX310076.486ENSACLG00000020011rbfox3b10076.582Astatotilapia_calliptera
ENSCSEG00000020606RBFOX310067.473ENSACLG00000025552-10068.280Astatotilapia_calliptera
ENSCSEG00000020606RBFOX310067.112ENSAMXG00000037246rbfox3a10068.717Astyanax_mexicanus
ENSCSEG00000020606RBFOX39671.067ENSAMXG00000042841rbfox3b10071.348Astyanax_mexicanus
ENSCSEG00000020606RBFOX37071.849ENSBTAG00000006280RBFOX310050.275Bos_taurus
ENSCSEG00000020606RBFOX38361.538ENSCJAG00000009563RBFOX310057.967Callithrix_jacchus
ENSCSEG00000020606RBFOX36972.083ENSCAFG00000005547RBFOX38575.417Canis_familiaris
ENSCSEG00000020606RBFOX38756.772ENSCAFG00020008126RBFOX39956.499Canis_lupus_dingo
ENSCSEG00000020606RBFOX38756.196ENSCHIG00000009124RBFOX39956.499Capra_hircus
ENSCSEG00000020606RBFOX38756.897ENSTSYG00000029617RBFOX310058.356Carlito_syrichta
ENSCSEG00000020606RBFOX38359.226ENSCPOG00000021703RBFOX310057.493Cavia_porcellus
ENSCSEG00000020606RBFOX38366.434ENSCCAG00000028450RBFOX310066.246Cebus_capucinus
ENSCSEG00000020606RBFOX38367.133ENSCATG00000018349RBFOX310066.562Cercocebus_atys
ENSCSEG00000020606RBFOX38359.581ENSCLAG00000006449RBFOX310057.808Chinchilla_lanigera
ENSCSEG00000020606RBFOX38367.133ENSCSAG00000002355RBFOX310066.562Chlorocebus_sabaeus
ENSCSEG00000020606RBFOX38765.436ENSCPBG00000010904RBFOX310067.302Chrysemys_picta_bellii
ENSCSEG00000020606RBFOX38367.133ENSCANG00000043120RBFOX310066.562Colobus_angolensis_palliatus
ENSCSEG00000020606RBFOX38755.301ENSCGRG00001019476Rbfox310056.831Cricetulus_griseus_chok1gshd
ENSCSEG00000020606RBFOX38755.301ENSCGRG00000003268Rbfox310056.831Cricetulus_griseus_crigri
ENSCSEG00000020606RBFOX39770.474ENSCVAG00000006882rbfox3b9671.309Cyprinodon_variegatus
ENSCSEG00000020606RBFOX310068.097ENSDARG00000010083rbfox3a10069.437Danio_rerio
ENSCSEG00000020606RBFOX38368.531ENSDARG00000074310rbfox3b9866.228Danio_rerio
ENSCSEG00000020606RBFOX37657.605ENSDNOG00000039391RBFOX39753.333Dasypus_novemcinctus
ENSCSEG00000020606RBFOX38752.174ENSDORG00000005352Rbfox39950.933Dipodomys_ordii
ENSCSEG00000020606RBFOX39654.545ENSEBUG00000002129RBFOX39956.425Eptatretus_burgeri
ENSCSEG00000020606RBFOX37850.512ENSEBUG00000013559RBFOX38150.000Eptatretus_burgeri
ENSCSEG00000020606RBFOX38367.361ENSEASG00005005059RBFOX310066.458Equus_asinus_asinus
ENSCSEG00000020606RBFOX38367.361ENSECAG00000023811RBFOX310066.458Equus_caballus
ENSCSEG00000020606RBFOX37466.667ENSEEUG00000013974RBFOX37665.094Erinaceus_europaeus
ENSCSEG00000020606RBFOX310073.442ENSELUG00000017963rbfox3b9971.466Esox_lucius
ENSCSEG00000020606RBFOX39863.636ENSFCAG00000002555RBFOX310066.562Felis_catus
ENSCSEG00000020606RBFOX38754.192ENSFALG00000012288RBFOX38855.068Ficedula_albicollis
ENSCSEG00000020606RBFOX38354.167ENSFDAG00000007489RBFOX310052.589Fukomys_damarensis
ENSCSEG00000020606RBFOX38767.450ENSFHEG00000008550rbfox3b10067.937Fundulus_heteroclitus
ENSCSEG00000020606RBFOX36582.530ENSGMOG00000019304-9063.545Gadus_morhua
ENSCSEG00000020606RBFOX39864.820ENSGALG00000032889RBFOX310067.313Gallus_gallus
ENSCSEG00000020606RBFOX310072.702ENSGAFG00000005025rbfox3b9972.702Gambusia_affinis
ENSCSEG00000020606RBFOX38757.307ENSGACG00000002138-9956.464Gasterosteus_aculeatus
ENSCSEG00000020606RBFOX39864.444ENSGAGG00000020025RBFOX310067.619Gopherus_agassizii
ENSCSEG00000020606RBFOX38367.133ENSGGOG00000012546RBFOX310066.562Gorilla_gorilla
ENSCSEG00000020606RBFOX310076.694ENSHBUG00000018099rbfox3b9975.393Haplochromis_burtoni
ENSCSEG00000020606RBFOX39266.246ENSHBUG00000023098-9965.043Haplochromis_burtoni
ENSCSEG00000020606RBFOX38358.284ENSHGLG00000008679RBFOX310056.911Heterocephalus_glaber_female
ENSCSEG00000020606RBFOX38355.917ENSHGLG00100014739RBFOX39953.403Heterocephalus_glaber_male
ENSCSEG00000020606RBFOX38761.538ENSHCOG00000001863RBFOX39361.514Hippocampus_comes
ENSCSEG00000020606RBFOX38670.169ENSHCOG00000007444RBFOX38565.588Hippocampus_comes
ENSCSEG00000020606RBFOX38761.094ENSIPUG00000021966rbfox3b9769.549Ictalurus_punctatus
ENSCSEG00000020606RBFOX310067.024ENSIPUG00000012010rbfox3a10068.365Ictalurus_punctatus
ENSCSEG00000020606RBFOX38355.556ENSSTOG00000026817RBFOX310055.799Ictidomys_tridecemlineatus
ENSCSEG00000020606RBFOX38755.908ENSJJAG00000014167Rbfox310057.692Jaculus_jaculus
ENSCSEG00000020606RBFOX310076.694ENSKMAG00000006726rbfox3b10077.507Kryptolebias_marmoratus
ENSCSEG00000020606RBFOX310076.965ENSLBEG00000004030rbfox3b10078.049Labrus_bergylta
ENSCSEG00000020606RBFOX310068.548ENSLBEG00000022508-10068.817Labrus_bergylta
ENSCSEG00000020606RBFOX38757.927ENSLACG00000018409-9058.989Latimeria_chalumnae
ENSCSEG00000020606RBFOX38771.000ENSLOCG00000012267rbfox3a9870.948Lepisosteus_oculatus
ENSCSEG00000020606RBFOX38361.270ENSLAFG00000016623RBFOX39957.029Loxodonta_africana
ENSCSEG00000020606RBFOX38755.072ENSMFAG00000002247RBFOX310058.242Macaca_fascicularis
ENSCSEG00000020606RBFOX38367.133ENSMMUG00000023028RBFOX310066.562Macaca_mulatta
ENSCSEG00000020606RBFOX38367.133ENSMNEG00000041147RBFOX310066.562Macaca_nemestrina
ENSCSEG00000020606RBFOX38367.133ENSMLEG00000025686RBFOX310066.562Mandrillus_leucophaeus
ENSCSEG00000020606RBFOX38770.134ENSMAMG00000019810rbfox3b9969.206Mastacembelus_armatus
ENSCSEG00000020606RBFOX38765.217ENSMAMG00000020600-9364.438Mastacembelus_armatus
ENSCSEG00000020606RBFOX38153.395ENSMZEG00005003055-6177.305Maylandia_zebra
ENSCSEG00000020606RBFOX310076.694ENSMZEG00005000781rbfox3b10077.507Maylandia_zebra
ENSCSEG00000020606RBFOX35771.204ENSMGAG00000005600RBFOX38266.516Meleagris_gallopavo
ENSCSEG00000020606RBFOX38757.471ENSMAUG00000013543Rbfox310057.534Mesocricetus_auratus
ENSCSEG00000020606RBFOX39760.597ENSMICG00000014898RBFOX310066.456Microcebus_murinus
ENSCSEG00000020606RBFOX38754.598ENSMOCG00000015373Rbfox310056.438Microtus_ochrogaster
ENSCSEG00000020606RBFOX310073.046ENSMMOG00000020193rbfox3b10072.021Mola_mola
ENSCSEG00000020606RBFOX39862.707ENSMODG00000002089RBFOX310066.298Monodelphis_domestica
ENSCSEG00000020606RBFOX310067.742ENSMALG00000018270-10068.548Monopterus_albus
ENSCSEG00000020606RBFOX310076.423ENSMALG00000020407rbfox3b10076.965Monopterus_albus
ENSCSEG00000020606RBFOX38365.854MGP_CAROLIEiJ_G0017487Rbfox39676.978Mus_caroli
ENSCSEG00000020606RBFOX38367.596ENSMUSG00000025576Rbfox39676.978Mus_musculus
ENSCSEG00000020606RBFOX38365.972MGP_PahariEiJ_G0018614Rbfox39677.698Mus_pahari
ENSCSEG00000020606RBFOX38366.202MGP_SPRETEiJ_G0018331Rbfox39676.978Mus_spretus
ENSCSEG00000020606RBFOX38757.567ENSMPUG00000012319RBFOX39856.992Mustela_putorius_furo
ENSCSEG00000020606RBFOX38756.322ENSNGAG00000018006Rbfox310057.808Nannospalax_galili
ENSCSEG00000020606RBFOX310070.109ENSNBRG00000010102rbfox3b9970.109Neolamprologus_brichardi
ENSCSEG00000020606RBFOX39060.843ENSNBRG00000022885-9161.310Neolamprologus_brichardi
ENSCSEG00000020606RBFOX35068.208ENSNLEG00000000153-8850.000Nomascus_leucogenys
ENSCSEG00000020606RBFOX37963.830ENSMEUG00000004218-10040.771Notamacropus_eugenii
ENSCSEG00000020606RBFOX36071.141ENSOPRG00000016279-6864.865Ochotona_princeps
ENSCSEG00000020606RBFOX38369.338ENSODEG00000009433RBFOX310066.352Octodon_degus
ENSCSEG00000020606RBFOX39266.562ENSONIG00000007282-9468.196Oreochromis_niloticus
ENSCSEG00000020606RBFOX39770.474ENSONIG00000009549rbfox3b9671.588Oreochromis_niloticus
ENSCSEG00000020606RBFOX36457.197ENSOCUG00000014217RBFOX37757.295Oryctolagus_cuniculus
ENSCSEG00000020606RBFOX310077.778ENSORLG00000000905rbfox3b7977.778Oryzias_latipes
ENSCSEG00000020606RBFOX310077.778ENSORLG00020018030rbfox3b9977.778Oryzias_latipes_hni
ENSCSEG00000020606RBFOX310077.778ENSORLG00015009200rbfox3b9977.778Oryzias_latipes_hsok
ENSCSEG00000020606RBFOX38275.080ENSOMEG00000014677rbfox3b8673.636Oryzias_melastigma
ENSCSEG00000020606RBFOX38367.133ENSOGAG00000029595RBFOX38764.653Otolemur_garnettii
ENSCSEG00000020606RBFOX36755.894ENSOARG00000002908RBFOX38751.268Ovis_aries
ENSCSEG00000020606RBFOX37170.954ENSPPAG00000025383RBFOX39767.972Pan_paniscus
ENSCSEG00000020606RBFOX38358.716ENSPPRG00000007819RBFOX310059.218Panthera_pardus
ENSCSEG00000020606RBFOX38367.133ENSPTRG00000009727RBFOX310066.562Pan_troglodytes
ENSCSEG00000020606RBFOX38367.133ENSPANG00000019837RBFOX310066.562Papio_anubis
ENSCSEG00000020606RBFOX38960.923ENSPKIG00000022633-9958.967Paramormyrops_kingsleyae
ENSCSEG00000020606RBFOX310061.725ENSPKIG00000010299rbfox3a9961.198Paramormyrops_kingsleyae
ENSCSEG00000020606RBFOX38973.313ENSPMGG00000008000rbfox3b10074.006Periophthalmus_magnuspinnatus
ENSCSEG00000020606RBFOX38755.172ENSPEMG00000010500Rbfox310056.986Peromyscus_maniculatus_bairdii
ENSCSEG00000020606RBFOX35062.105ENSPMAG00000008689rbfox3b9961.576Petromyzon_marinus
ENSCSEG00000020606RBFOX39856.724ENSPCIG00000005766RBFOX310058.924Phascolarctos_cinereus
ENSCSEG00000020606RBFOX39770.474ENSPFOG00000018294rbfox3b9669.355Poecilia_formosa
ENSCSEG00000020606RBFOX36980.335ENSPLAG00000000481rbfox3b7876.984Poecilia_latipinna
ENSCSEG00000020606RBFOX38767.450ENSPMEG00000022997rbfox3b10067.619Poecilia_mexicana
ENSCSEG00000020606RBFOX310078.049ENSPREG00000012886rbfox3b9978.049Poecilia_reticulata
ENSCSEG00000020606RBFOX37164.315ENSPPYG00000008704RBFOX38560.410Pongo_abelii
ENSCSEG00000020606RBFOX38756.196ENSPCAG00000001401RBFOX310057.418Procavia_capensis
ENSCSEG00000020606RBFOX38756.772ENSPCOG00000012689RBFOX310058.242Propithecus_coquereli
ENSCSEG00000020606RBFOX38350.898ENSPVAG00000015243RBFOX310051.507Pteropus_vampyrus
ENSCSEG00000020606RBFOX310070.109ENSPNYG00000010414rbfox3b9970.109Pundamilia_nyererei
ENSCSEG00000020606RBFOX310063.043ENSPNYG00000009079-9663.441Pundamilia_nyererei
ENSCSEG00000020606RBFOX38755.219ENSPNAG00000018173rbfox3b9456.481Pygocentrus_nattereri
ENSCSEG00000020606RBFOX310067.380ENSPNAG00000002889rbfox3a10068.984Pygocentrus_nattereri
ENSCSEG00000020606RBFOX38365.972ENSRNOG00000003386Rbfox310065.517Rattus_norvegicus
ENSCSEG00000020606RBFOX39863.361ENSRBIG00000040449RBFOX310065.840Rhinopithecus_bieti
ENSCSEG00000020606RBFOX38367.133ENSRROG00000000766RBFOX310066.562Rhinopithecus_roxellana
ENSCSEG00000020606RBFOX38366.434ENSSBOG00000031591RBFOX310066.246Saimiri_boliviensis_boliviensis
ENSCSEG00000020606RBFOX38760.423ENSSHAG00000016076RBFOX310057.595Sarcophilus_harrisii
ENSCSEG00000020606RBFOX310061.725ENSSFOG00015023260rbfox3a10063.612Scleropages_formosus
ENSCSEG00000020606RBFOX39859.669ENSSFOG00015004716RBFOX310061.983Scleropages_formosus
ENSCSEG00000020606RBFOX39768.267ENSSMAG00000012618rbfox3b7871.758Scophthalmus_maximus
ENSCSEG00000020606RBFOX39868.785ENSSMAG00000019052-10069.085Scophthalmus_maximus
ENSCSEG00000020606RBFOX310063.342ENSSDUG00000015801-9963.564Seriola_dumerili
ENSCSEG00000020606RBFOX38767.450ENSSDUG00000023183rbfox3b10067.937Seriola_dumerili
ENSCSEG00000020606RBFOX310064.151ENSSLDG00000016098-9965.252Seriola_lalandi_dorsalis
ENSCSEG00000020606RBFOX310076.965ENSSLDG00000000149rbfox3b10078.049Seriola_lalandi_dorsalis
ENSCSEG00000020606RBFOX39856.111ENSSPUG00000011733RBFOX310067.508Sphenodon_punctatus
ENSCSEG00000020606RBFOX310069.648ENSSPAG00000017571rbfox3b9970.461Stegastes_partitus
ENSCSEG00000020606RBFOX38462.456ENSSPAG00000004898-9758.589Stegastes_partitus
ENSCSEG00000020606RBFOX37968.015ENSSSCG00000039498RBFOX39958.434Sus_scrofa
ENSCSEG00000020606RBFOX38771.336ENSTRUG00000004894rbfox3b9767.335Takifugu_rubripes
ENSCSEG00000020606RBFOX38867.131ENSTNIG00000011278rbfox3b9365.684Tetraodon_nigroviridis
ENSCSEG00000020606RBFOX35653.219ENSTBEG00000004296-6353.219Tupaia_belangeri
ENSCSEG00000020606RBFOX38751.297ENSTTRG00000003676RBFOX310053.297Tursiops_truncatus
ENSCSEG00000020606RBFOX38367.483ENSUAMG00000004668RBFOX310066.877Ursus_americanus
ENSCSEG00000020606RBFOX39863.636ENSVVUG00000017864RBFOX310066.562Vulpes_vulpes
ENSCSEG00000020606RBFOX38754.969ENSXETG00000020236rbfox39154.121Xenopus_tropicalis
ENSCSEG00000020606RBFOX39768.436ENSXCOG00000018262rbfox3b10072.524Xiphophorus_couchianus
ENSCSEG00000020606RBFOX310076.694ENSXMAG00000012939rbfox3b9975.654Xiphophorus_maculatus

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