EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000020665 (Gene tree)
Gene ID: 103380840
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 9748 bases
Position: chr7:5077110-5086857
Accession: 103380840
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000032217	PARP	PF00644.20	3.2e-73	1	1
ENSCSEP00000032212	PARP	PF00644.20	3.7e-73	1	1
ENSCSEP00000032205	PARP	PF00644.20	6.3e-49	1	1
ENSCSEP00000032221	PARP	PF00644.20	8.6e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000032637	-	4358	-	ENSCSEP00000032217	935 (aa)	-	-
ENSCSET00000032641	-	2916	-	ENSCSEP00000032221	971 (aa)	-	-
ENSCSET00000032625	-	5085	-	ENSCSEP00000032205	930 (aa)	-	-
ENSCSET00000032632	-	4598	XM_008312952	ENSCSEP00000032212	1015 (aa)	XP_008311174	UPI0004978439

Gene Model

Click here to download ENSCSEG00000020665's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03410	Base excision repair	KEGG
csem04210	Apoptosis	KEGG
csem04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000020665	parp1	52	42.914	ENSCSEG00000021341	parp2	99	42.360
ENSCSEG00000020665	parp1	51	30.584	ENSCSEG00000002582	parp3	91	30.584

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020665	parp1	99	77.733	ENSG00000143799	PARP1	100	69.667	Homo_sapiens
ENSCSEG00000020665	parp1	99	90.964	ENSAPOG00000006414	parp1	100	88.177	Acanthochromis_polyacanthus
ENSCSEG00000020665	parp1	99	77.733	ENSAMEG00000014451	PARP1	93	77.733	Ailuropoda_melanoleuca
ENSCSEG00000020665	parp1	100	91.968	ENSACIG00000005651	parp1	100	91.968	Amphilophus_citrinellus
ENSCSEG00000020665	parp1	100	92.369	ENSAOCG00000021005	parp1	100	92.369	Amphiprion_ocellaris
ENSCSEG00000020665	parp1	100	92.369	ENSAPEG00000004784	parp1	100	92.369	Amphiprion_percula
ENSCSEG00000020665	parp1	99	91.566	ENSATEG00000010457	parp1	100	87.586	Anabas_testudineus
ENSCSEG00000020665	parp1	85	81.984	ENSAPLG00000014039	PARP1	99	72.994	Anas_platyrhynchos
ENSCSEG00000020665	parp1	99	80.162	ENSACAG00000006189	PARP1	100	71.303	Anolis_carolinensis
ENSCSEG00000020665	parp1	99	77.530	ENSANAG00000032699	PARP1	100	69.667	Aotus_nancymaae
ENSCSEG00000020665	parp1	100	91.767	ENSACLG00000015489	parp1	100	91.767	Astatotilapia_calliptera
ENSCSEG00000020665	parp1	100	84.393	ENSAMXG00000006465	parp1	98	84.393	Astyanax_mexicanus
ENSCSEG00000020665	parp1	99	76.721	ENSBTAG00000000837	PARP1	100	67.937	Bos_taurus
ENSCSEG00000020665	parp1	99	33.702	WBGene00004049	parp-1	100	46.360	Caenorhabditis_elegans
ENSCSEG00000020665	parp1	99	77.530	ENSCJAG00000012831	PARP1	100	69.374	Callithrix_jacchus
ENSCSEG00000020665	parp1	99	77.530	ENSCAFG00000016089	PARP1	100	68.846	Canis_familiaris
ENSCSEG00000020665	parp1	99	77.733	ENSCAFG00020001660	PARP1	100	69.374	Canis_lupus_dingo
ENSCSEG00000020665	parp1	99	76.923	ENSCHIG00000018072	PARP1	100	68.426	Capra_hircus
ENSCSEG00000020665	parp1	99	77.733	ENSTSYG00000003699	PARP1	100	70.996	Carlito_syrichta
ENSCSEG00000020665	parp1	99	58.873	ENSCAPG00000011113	-	99	57.998	Cavia_aperea
ENSCSEG00000020665	parp1	100	75.146	ENSCPOG00000015643	-	100	69.396	Cavia_porcellus
ENSCSEG00000020665	parp1	99	77.530	ENSCCAG00000033484	PARP1	100	69.863	Cebus_capucinus
ENSCSEG00000020665	parp1	99	77.328	ENSCATG00000038981	PARP1	100	69.493	Cercocebus_atys
ENSCSEG00000020665	parp1	99	74.138	ENSCLAG00000006637	PARP1	94	74.138	Chinchilla_lanigera
ENSCSEG00000020665	parp1	62	88.372	ENSCHOG00000003539	PARP1	57	88.372	Choloepus_hoffmanni
ENSCSEG00000020665	parp1	99	78.119	ENSCPBG00000011958	PARP1	94	78.119	Chrysemys_picta_bellii
ENSCSEG00000020665	parp1	99	77.328	ENSCANG00000041340	PARP1	100	69.036	Colobus_angolensis_palliatus
ENSCSEG00000020665	parp1	99	76.721	ENSCGRG00001020559	Parp1	99	68.861	Cricetulus_griseus_chok1gshd
ENSCSEG00000020665	parp1	99	76.721	ENSCGRG00000004864	Parp1	100	68.534	Cricetulus_griseus_crigri
ENSCSEG00000020665	parp1	99	91.165	ENSCVAG00000021372	parp1	99	91.165	Cyprinodon_variegatus
ENSCSEG00000020665	parp1	100	87.349	ENSDARG00000019529	parp1	96	87.349	Danio_rerio
ENSCSEG00000020665	parp1	99	76.923	ENSDNOG00000012059	PARP1	100	69.223	Dasypus_novemcinctus
ENSCSEG00000020665	parp1	99	76.518	ENSDORG00000005234	Parp1	100	68.878	Dipodomys_ordii
ENSCSEG00000020665	parp1	99	42.141	FBgn0010247	Parp	99	41.454	Drosophila_melanogaster
ENSCSEG00000020665	parp1	86	88.372	ENSETEG00000013254	PARP1	79	88.372	Echinops_telfairi
ENSCSEG00000020665	parp1	99	64.522	ENSEBUG00000005820	parp1	92	66.860	Eptatretus_burgeri
ENSCSEG00000020665	parp1	98	77.547	ENSEASG00005013275	PARP1	99	69.920	Equus_asinus_asinus
ENSCSEG00000020665	parp1	100	77.154	ENSECAG00000019207	PARP1	100	69.667	Equus_caballus
ENSCSEG00000020665	parp1	99	77.530	ENSEEUG00000012253	PARP1	91	77.530	Erinaceus_europaeus
ENSCSEG00000020665	parp1	100	84.571	ENSELUG00000017336	parp1	98	84.704	Esox_lucius
ENSCSEG00000020665	parp1	96	76.923	ENSFCAG00000005777	PARP1	96	76.923	Felis_catus
ENSCSEG00000020665	parp1	99	75.956	ENSFALG00000011578	PARP1	100	72.959	Ficedula_albicollis
ENSCSEG00000020665	parp1	99	74.138	ENSFDAG00000017662	PARP1	94	74.138	Fukomys_damarensis
ENSCSEG00000020665	parp1	100	90.161	ENSFHEG00000001117	parp1	100	90.161	Fundulus_heteroclitus
ENSCSEG00000020665	parp1	99	88.956	ENSGMOG00000014929	parp1	100	81.827	Gadus_morhua
ENSCSEG00000020665	parp1	99	81.984	ENSGALG00000009228	PARP1	100	73.359	Gallus_gallus
ENSCSEG00000020665	parp1	100	88.269	ENSGAFG00000010450	parp1	100	88.439	Gambusia_affinis
ENSCSEG00000020665	parp1	99	91.566	ENSGACG00000011280	parp1	100	86.431	Gasterosteus_aculeatus
ENSCSEG00000020665	parp1	99	77.927	ENSGAGG00000010066	PARP1	94	77.927	Gopherus_agassizii
ENSCSEG00000020665	parp1	99	77.530	ENSGGOG00000006308	PARP1	100	69.374	Gorilla_gorilla
ENSCSEG00000020665	parp1	100	91.968	ENSHBUG00000010490	parp1	100	91.968	Haplochromis_burtoni
ENSCSEG00000020665	parp1	95	76.316	ENSHGLG00000003992	PARP1	85	76.316	Heterocephalus_glaber_female
ENSCSEG00000020665	parp1	95	76.316	ENSHGLG00100016965	PARP1	85	76.316	Heterocephalus_glaber_male
ENSCSEG00000020665	parp1	100	88.867	ENSHCOG00000011619	parp1	100	84.608	Hippocampus_comes
ENSCSEG00000020665	parp1	100	87.349	ENSIPUG00000020250	parp1	100	80.488	Ictalurus_punctatus
ENSCSEG00000020665	parp1	99	77.733	ENSSTOG00000016000	PARP1	100	69.434	Ictidomys_tridecemlineatus
ENSCSEG00000020665	parp1	99	73.501	ENSJJAG00000023497	Parp1	99	68.830	Jaculus_jaculus
ENSCSEG00000020665	parp1	100	91.767	ENSKMAG00000011627	parp1	100	91.767	Kryptolebias_marmoratus
ENSCSEG00000020665	parp1	100	92.570	ENSLBEG00000013376	parp1	100	92.570	Labrus_bergylta
ENSCSEG00000020665	parp1	95	79.075	ENSLACG00000002735	PARP1	91	74.494	Latimeria_chalumnae
ENSCSEG00000020665	parp1	100	78.171	ENSLOCG00000015798	parp1	100	78.389	Lepisosteus_oculatus
ENSCSEG00000020665	parp1	99	78.340	ENSLAFG00000007830	PARP1	91	78.340	Loxodonta_africana
ENSCSEG00000020665	parp1	99	77.328	ENSMFAG00000002526	PARP1	100	69.396	Macaca_fascicularis
ENSCSEG00000020665	parp1	99	77.328	ENSMMUG00000021820	PARP1	100	69.493	Macaca_mulatta
ENSCSEG00000020665	parp1	99	77.328	ENSMNEG00000034074	PARP1	100	69.396	Macaca_nemestrina
ENSCSEG00000020665	parp1	99	73.843	ENSMLEG00000012344	PARP1	100	67.638	Mandrillus_leucophaeus
ENSCSEG00000020665	parp1	100	91.348	ENSMAMG00000020652	parp1	100	91.348	Mastacembelus_armatus
ENSCSEG00000020665	parp1	100	91.767	ENSMZEG00005016907	parp1	100	91.767	Maylandia_zebra
ENSCSEG00000020665	parp1	99	81.984	ENSMGAG00000007760	PARP1	100	73.238	Meleagris_gallopavo
ENSCSEG00000020665	parp1	99	76.518	ENSMAUG00000008306	Parp1	99	68.861	Mesocricetus_auratus
ENSCSEG00000020665	parp1	99	72.065	ENSMICG00000017076	PARP1	100	66.862	Microcebus_murinus
ENSCSEG00000020665	parp1	99	74.468	ENSMOCG00000014315	Parp1	99	69.352	Microtus_ochrogaster
ENSCSEG00000020665	parp1	100	91.400	ENSMMOG00000015966	parp1	100	91.400	Mola_mola
ENSCSEG00000020665	parp1	99	77.530	ENSMODG00000006076	PARP1	100	69.697	Monodelphis_domestica
ENSCSEG00000020665	parp1	100	85.222	ENSMALG00000004057	parp1	100	90.361	Monopterus_albus
ENSCSEG00000020665	parp1	99	76.923	MGP_CAROLIEiJ_G0014978	Parp1	100	74.490	Mus_caroli
ENSCSEG00000020665	parp1	99	76.923	ENSMUSG00000026496	Parp1	99	74.490	Mus_musculus
ENSCSEG00000020665	parp1	99	76.923	MGP_SPRETEiJ_G0015777	Parp1	100	74.490	Mus_spretus
ENSCSEG00000020665	parp1	99	77.733	ENSMPUG00000004585	PARP1	100	69.727	Mustela_putorius_furo
ENSCSEG00000020665	parp1	85	73.799	ENSMLUG00000012285	PARP1	88	73.799	Myotis_lucifugus
ENSCSEG00000020665	parp1	99	76.113	ENSNGAG00000003885	Parp1	99	68.762	Nannospalax_galili
ENSCSEG00000020665	parp1	100	91.767	ENSNBRG00000017434	parp1	100	91.767	Neolamprologus_brichardi
ENSCSEG00000020665	parp1	96	75.079	ENSNLEG00000013905	PARP1	100	74.129	Nomascus_leucogenys
ENSCSEG00000020665	parp1	67	78.209	ENSMEUG00000007720	PARP1	87	78.209	Notamacropus_eugenii
ENSCSEG00000020665	parp1	99	78.138	ENSOPRG00000011722	PARP1	100	70.117	Ochotona_princeps
ENSCSEG00000020665	parp1	100	74.275	ENSODEG00000007424	PARP1	100	68.524	Octodon_degus
ENSCSEG00000020665	parp1	100	91.767	ENSONIG00000013486	parp1	100	91.767	Oreochromis_niloticus
ENSCSEG00000020665	parp1	99	79.596	ENSOANG00000001488	PARP1	95	79.596	Ornithorhynchus_anatinus
ENSCSEG00000020665	parp1	99	77.935	ENSOCUG00000017820	PARP1	100	69.854	Oryctolagus_cuniculus
ENSCSEG00000020665	parp1	100	91.767	ENSORLG00000013691	parp1	100	91.767	Oryzias_latipes
ENSCSEG00000020665	parp1	99	91.400	ENSORLG00020001074	parp1	99	91.400	Oryzias_latipes_hni
ENSCSEG00000020665	parp1	100	91.566	ENSORLG00015007090	parp1	100	91.566	Oryzias_latipes_hsok
ENSCSEG00000020665	parp1	99	77.935	ENSOGAG00000016206	PARP1	100	69.472	Otolemur_garnettii
ENSCSEG00000020665	parp1	99	76.721	ENSOARG00000000811	PARP1	100	68.426	Ovis_aries
ENSCSEG00000020665	parp1	99	77.126	ENSPPAG00000040862	PARP1	100	69.276	Pan_paniscus
ENSCSEG00000020665	parp1	96	76.923	ENSPPRG00000003528	PARP1	96	76.923	Panthera_pardus
ENSCSEG00000020665	parp1	96	58.036	ENSPTIG00000009102	PARP1	98	60.636	Panthera_tigris_altaica
ENSCSEG00000020665	parp1	99	77.126	ENSPTRG00000002049	PARP1	100	69.276	Pan_troglodytes
ENSCSEG00000020665	parp1	99	77.328	ENSPANG00000011198	PARP1	100	69.426	Papio_anubis
ENSCSEG00000020665	parp1	100	85.631	ENSPKIG00000006039	parp1	97	85.631	Paramormyrops_kingsleyae
ENSCSEG00000020665	parp1	99	79.798	ENSPSIG00000016374	PARP1	100	71.690	Pelodiscus_sinensis
ENSCSEG00000020665	parp1	100	85.769	ENSPMGG00000008936	parp1	96	85.769	Periophthalmus_magnuspinnatus
ENSCSEG00000020665	parp1	99	76.721	ENSPEMG00000020230	Parp1	99	69.155	Peromyscus_maniculatus_bairdii
ENSCSEG00000020665	parp1	99	78.340	ENSPCIG00000006436	PARP1	99	70.374	Phascolarctos_cinereus
ENSCSEG00000020665	parp1	100	91.165	ENSPFOG00000002342	parp1	100	91.165	Poecilia_formosa
ENSCSEG00000020665	parp1	100	91.165	ENSPLAG00000000909	parp1	100	88.632	Poecilia_latipinna
ENSCSEG00000020665	parp1	100	88.846	ENSPMEG00000013979	parp1	100	89.017	Poecilia_mexicana
ENSCSEG00000020665	parp1	100	88.269	ENSPREG00000001114	parp1	100	88.269	Poecilia_reticulata
ENSCSEG00000020665	parp1	99	77.530	ENSPPYG00000000164	PARP1	100	69.254	Pongo_abelii
ENSCSEG00000020665	parp1	65	77.778	ENSPCAG00000005558	-	59	77.778	Procavia_capensis
ENSCSEG00000020665	parp1	99	78.543	ENSPCOG00000016918	PARP1	100	70.059	Propithecus_coquereli
ENSCSEG00000020665	parp1	91	79.528	ENSPVAG00000005543	PARP1	92	75.943	Pteropus_vampyrus
ENSCSEG00000020665	parp1	100	91.767	ENSPNYG00000009702	parp1	100	91.767	Pundamilia_nyererei
ENSCSEG00000020665	parp1	100	85.549	ENSPNAG00000002787	parp1	98	85.549	Pygocentrus_nattereri
ENSCSEG00000020665	parp1	99	76.923	ENSRNOG00000003084	Parp1	99	69.155	Rattus_norvegicus
ENSCSEG00000020665	parp1	99	77.328	ENSRBIG00000044893	PARP1	99	70.644	Rhinopithecus_bieti
ENSCSEG00000020665	parp1	99	51.914	ENSRROG00000040615	-	97	59.740	Rhinopithecus_roxellana
ENSCSEG00000020665	parp1	99	77.328	ENSRROG00000029280	PARP1	99	70.644	Rhinopithecus_roxellana
ENSCSEG00000020665	parp1	99	77.935	ENSSBOG00000010144	PARP1	100	70.059	Saimiri_boliviensis_boliviensis
ENSCSEG00000020665	parp1	99	78.340	ENSSHAG00000001991	PARP1	100	70.031	Sarcophilus_harrisii
ENSCSEG00000020665	parp1	100	80.765	ENSSFOG00015020017	parp1	100	80.667	Scleropages_formosus
ENSCSEG00000020665	parp1	99	91.549	ENSSMAG00000013799	parp1	100	91.549	Scophthalmus_maximus
ENSCSEG00000020665	parp1	100	92.169	ENSSDUG00000016626	parp1	100	92.169	Seriola_dumerili
ENSCSEG00000020665	parp1	100	92.369	ENSSLDG00000006384	parp1	100	92.369	Seriola_lalandi_dorsalis
ENSCSEG00000020665	parp1	58	76.620	ENSSARG00000009436	-	59	76.620	Sorex_araneus
ENSCSEG00000020665	parp1	99	74.696	ENSSPUG00000007790	PARP1	100	68.333	Sphenodon_punctatus
ENSCSEG00000020665	parp1	100	88.065	ENSSPAG00000019074	parp1	100	92.010	Stegastes_partitus
ENSCSEG00000020665	parp1	99	76.518	ENSSSCG00000023660	PARP1	100	69.472	Sus_scrofa
ENSCSEG00000020665	parp1	98	79.344	ENSTGUG00000004260	-	100	72.597	Taeniopygia_guttata
ENSCSEG00000020665	parp1	99	91.365	ENSTRUG00000014490	parp1	100	84.828	Takifugu_rubripes
ENSCSEG00000020665	parp1	100	91.767	ENSTNIG00000016384	parp1	100	91.767	Tetraodon_nigroviridis
ENSCSEG00000020665	parp1	82	76.078	ENSTBEG00000002364	PARP1	92	76.078	Tupaia_belangeri
ENSCSEG00000020665	parp1	99	67.409	ENSTTRG00000000188	PARP1	100	64.579	Tursiops_truncatus
ENSCSEG00000020665	parp1	99	77.733	ENSUAMG00000014388	PARP1	93	77.733	Ursus_americanus
ENSCSEG00000020665	parp1	96	70.040	ENSUMAG00000014555	PARP1	92	70.040	Ursus_maritimus
ENSCSEG00000020665	parp1	88	76.863	ENSVPAG00000011411	PARP1	83	76.863	Vicugna_pacos
ENSCSEG00000020665	parp1	95	77.530	ENSVVUG00000001655	PARP1	100	68.846	Vulpes_vulpes
ENSCSEG00000020665	parp1	98	77.778	ENSXETG00000022610	parp1	99	70.259	Xenopus_tropicalis
ENSCSEG00000020665	parp1	100	90.964	ENSXMAG00000003632	parp1	100	88.439	Xiphophorus_maculatus