EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000020669 (Gene tree)
Gene ID: 103385446
Gene Symbol: LSM14B (1 of many)
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: protein LSM14 homolog B
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 11421 bases
Position: chr10:18446210-18457630
Accession: 103385446
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000032202	FDF	PF09532.10	3.6e-06	1	1
ENSCSEP00000032203	FDF	PF09532.10	3.6e-06	1	1
ENSCSEP00000032202	LSM14	PF12701.7	7.2e-27	1	1
ENSCSEP00000032203	LSM14	PF12701.7	7.2e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000032622	LSM14B (1 of many)-201	3179	-	ENSCSEP00000032202	382 (aa)	XP_024914772	UPI0004973A32
ENSCSET00000032623	LSM14B (1 of many)-202	2034	XM_008319339	ENSCSEP00000032203	382 (aa)	XP_008317561	UPI0004973A32

Gene Model

Click here to download ENSCSEG00000020669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000020669	LSM14B	92	36.341	ENSCSEG00000021457	lsm14aa	93	63.918
ENSCSEG00000020669	LSM14B	90	38.482	ENSCSEG00000011324	lsm14ab	69	54.135
ENSCSEG00000020669	LSM14B	90	46.154	ENSCSEG00000004722	lsm14b	93	47.107

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020669	LSM14B	92	47.594	ENSG00000149657	LSM14B	99	48.684	Homo_sapiens
ENSCSEG00000020669	LSM14B	90	48.148	ENSAPOG00000001780	lsm14b	93	49.593	Acanthochromis_polyacanthus
ENSCSEG00000020669	LSM14B	92	40.482	ENSAMEG00000013430	LSM14B	96	41.531	Ailuropoda_melanoleuca
ENSCSEG00000020669	LSM14B	91	47.293	ENSACIG00000012266	lsm14b	95	48.238	Amphilophus_citrinellus
ENSCSEG00000020669	LSM14B	99	61.637	ENSAOCG00000006667	LSM14B	99	61.893	Amphiprion_ocellaris
ENSCSEG00000020669	LSM14B	90	46.991	ENSAOCG00000012380	lsm14b	93	48.501	Amphiprion_ocellaris
ENSCSEG00000020669	LSM14B	90	44.828	ENSAPEG00000023633	lsm14b	93	45.822	Amphiprion_percula
ENSCSEG00000020669	LSM14B	70	53.741	ENSATEG00000015895	LSM14B	97	54.045	Anabas_testudineus
ENSCSEG00000020669	LSM14B	90	46.479	ENSATEG00000016603	lsm14b	98	47.135	Anabas_testudineus
ENSCSEG00000020669	LSM14B	84	39.474	ENSAPLG00000013203	LSM14B	99	40.441	Anas_platyrhynchos
ENSCSEG00000020669	LSM14B	92	46.702	ENSACAG00000016195	LSM14B	98	47.619	Anolis_carolinensis
ENSCSEG00000020669	LSM14B	92	47.425	ENSANAG00000037915	LSM14B	95	47.179	Aotus_nancymaae
ENSCSEG00000020669	LSM14B	90	46.067	ENSACLG00000019663	lsm14b	94	47.123	Astatotilapia_calliptera
ENSCSEG00000020669	LSM14B	54	45.714	ENSACLG00000008384	-	68	49.524	Astatotilapia_calliptera
ENSCSEG00000020669	LSM14B	54	49.296	ENSACLG00000011955	-	70	50.711	Astatotilapia_calliptera
ENSCSEG00000020669	LSM14B	54	51.643	ENSACLG00000019624	-	71	53.081	Astatotilapia_calliptera
ENSCSEG00000020669	LSM14B	91	48.656	ENSAMXG00000002865	lsm14b	97	48.507	Astyanax_mexicanus
ENSCSEG00000020669	LSM14B	92	43.627	ENSBTAG00000021558	LSM14B	96	44.575	Bos_taurus
ENSCSEG00000020669	LSM14B	92	47.425	ENSCJAG00000014434	LSM14B	95	47.532	Callithrix_jacchus
ENSCSEG00000020669	LSM14B	82	39.623	ENSCAFG00000012518	LSM14B	94	40.827	Canis_familiaris
ENSCSEG00000020669	LSM14B	92	47.154	ENSCAFG00020022150	LSM14B	95	48.052	Canis_lupus_dingo
ENSCSEG00000020669	LSM14B	92	48.509	ENSCHIG00000010284	-	95	49.351	Capra_hircus
ENSCSEG00000020669	LSM14B	96	39.018	ENSCHIG00000022681	-	96	38.760	Capra_hircus
ENSCSEG00000020669	LSM14B	81	44.311	ENSTSYG00000031914	LSM14B	85	44.540	Carlito_syrichta
ENSCSEG00000020669	LSM14B	82	45.536	ENSCAPG00000013059	LSM14B	96	45.352	Cavia_aperea
ENSCSEG00000020669	LSM14B	81	45.373	ENSCPOG00000038080	LSM14B	96	45.198	Cavia_porcellus
ENSCSEG00000020669	LSM14B	92	47.425	ENSCCAG00000021267	LSM14B	95	47.179	Cebus_capucinus
ENSCSEG00000020669	LSM14B	92	35.405	ENSCCAG00000024900	-	80	37.065	Cebus_capucinus
ENSCSEG00000020669	LSM14B	92	47.326	ENSCATG00000036006	LSM14B	95	47.436	Cercocebus_atys
ENSCSEG00000020669	LSM14B	81	44.311	ENSCLAG00000003186	LSM14B	96	43.466	Chinchilla_lanigera
ENSCSEG00000020669	LSM14B	92	42.857	ENSCSAG00000015729	LSM14B	96	43.124	Chlorocebus_sabaeus
ENSCSEG00000020669	LSM14B	62	30.038	ENSCHOG00000006997	-	95	33.582	Choloepus_hoffmanni
ENSCSEG00000020669	LSM14B	92	41.304	ENSCPBG00000027065	LSM14B	99	42.237	Chrysemys_picta_bellii
ENSCSEG00000020669	LSM14B	81	43.713	ENSCANG00000036986	LSM14B	95	44.000	Colobus_angolensis_palliatus
ENSCSEG00000020669	LSM14B	92	48.387	ENSCGRG00001018399	Lsm14b	95	47.927	Cricetulus_griseus_chok1gshd
ENSCSEG00000020669	LSM14B	62	37.543	ENSCGRG00000006111	-	97	37.459	Cricetulus_griseus_crigri
ENSCSEG00000020669	LSM14B	66	43.462	ENSCVAG00000012433	-	96	42.308	Cyprinodon_variegatus
ENSCSEG00000020669	LSM14B	92	47.989	ENSDARG00000025386	lsm14b	99	49.000	Danio_rerio
ENSCSEG00000020669	LSM14B	62	37.374	ENSDNOG00000025246	LSM14B	96	36.508	Dasypus_novemcinctus
ENSCSEG00000020669	LSM14B	82	44.277	ENSDORG00000016683	Lsm14b	95	37.255	Dipodomys_ordii
ENSCSEG00000020669	LSM14B	57	39.224	ENSETEG00000011188	-	93	38.793	Echinops_telfairi
ENSCSEG00000020669	LSM14B	93	40.584	ENSETEG00000001869	-	99	39.900	Echinops_telfairi
ENSCSEG00000020669	LSM14B	62	42.460	ENSEASG00005023218	LSM14B	93	42.481	Equus_asinus_asinus
ENSCSEG00000020669	LSM14B	92	47.826	ENSECAG00000010659	LSM14B	95	49.231	Equus_caballus
ENSCSEG00000020669	LSM14B	91	50.413	ENSELUG00000016299	LSM14B	97	50.130	Esox_lucius
ENSCSEG00000020669	LSM14B	98	48.964	ENSELUG00000005780	lsm14b	98	48.579	Esox_lucius
ENSCSEG00000020669	LSM14B	92	47.326	ENSFCAG00000003248	LSM14B	95	48.205	Felis_catus
ENSCSEG00000020669	LSM14B	82	40.160	ENSFALG00000010618	LSM14B	99	41.542	Ficedula_albicollis
ENSCSEG00000020669	LSM14B	81	44.910	ENSFDAG00000002214	LSM14B	95	45.143	Fukomys_damarensis
ENSCSEG00000020669	LSM14B	73	56.897	ENSFHEG00000003362	LSM14B	80	55.183	Fundulus_heteroclitus
ENSCSEG00000020669	LSM14B	91	45.892	ENSFHEG00000006237	lsm14b	95	45.187	Fundulus_heteroclitus
ENSCSEG00000020669	LSM14B	76	62.941	ENSGMOG00000017115	lsm14b	95	47.594	Gadus_morhua
ENSCSEG00000020669	LSM14B	92	46.809	ENSGALG00000005125	LSM14B	99	47.030	Gallus_gallus
ENSCSEG00000020669	LSM14B	90	44.318	ENSGAFG00000020318	lsm14b	94	43.089	Gambusia_affinis
ENSCSEG00000020669	LSM14B	66	47.082	ENSGAFG00000013723	LSM14B	95	47.082	Gambusia_affinis
ENSCSEG00000020669	LSM14B	92	48.333	ENSGACG00000009973	lsm14b	99	47.668	Gasterosteus_aculeatus
ENSCSEG00000020669	LSM14B	56	37.288	ENSGAGG00000004106	LSM14B	93	39.615	Gopherus_agassizii
ENSCSEG00000020669	LSM14B	83	44.118	ENSGGOG00000005630	LSM14B	91	44.382	Gorilla_gorilla
ENSCSEG00000020669	LSM14B	92	46.400	ENSHGLG00000015055	LSM14B	95	46.803	Heterocephalus_glaber_female
ENSCSEG00000020669	LSM14B	81	43.544	ENSHGLG00100015273	LSM14B	95	45.087	Heterocephalus_glaber_male
ENSCSEG00000020669	LSM14B	62	39.004	ENSHCOG00000004867	lsm14b	99	39.925	Hippocampus_comes
ENSCSEG00000020669	LSM14B	96	59.574	ENSHCOG00000018747	LSM14B	97	60.106	Hippocampus_comes
ENSCSEG00000020669	LSM14B	91	48.378	ENSIPUG00000014946	lsm14b	91	49.231	Ictalurus_punctatus
ENSCSEG00000020669	LSM14B	81	44.776	ENSSTOG00000020482	LSM14B	95	44.729	Ictidomys_tridecemlineatus
ENSCSEG00000020669	LSM14B	91	48.087	ENSJJAG00000012728	Lsm14b	94	47.906	Jaculus_jaculus
ENSCSEG00000020669	LSM14B	52	51.923	ENSKMAG00000012834	-	98	51.515	Kryptolebias_marmoratus
ENSCSEG00000020669	LSM14B	90	47.645	ENSKMAG00000017524	lsm14b	93	47.312	Kryptolebias_marmoratus
ENSCSEG00000020669	LSM14B	51	62.774	ENSLBEG00000007951	LSM14B	99	47.407	Labrus_bergylta
ENSCSEG00000020669	LSM14B	93	38.337	ENSLACG00000003849	LSM14B	96	42.494	Latimeria_chalumnae
ENSCSEG00000020669	LSM14B	92	50.667	ENSLOCG00000003746	lsm14b	97	51.139	Lepisosteus_oculatus
ENSCSEG00000020669	LSM14B	82	44.012	ENSLAFG00000007492	LSM14B	96	43.750	Loxodonta_africana
ENSCSEG00000020669	LSM14B	92	47.594	ENSMFAG00000041479	LSM14B	95	47.692	Macaca_fascicularis
ENSCSEG00000020669	LSM14B	92	47.594	ENSMMUG00000014084	LSM14B	95	47.692	Macaca_mulatta
ENSCSEG00000020669	LSM14B	92	47.594	ENSMNEG00000045573	LSM14B	95	47.692	Macaca_nemestrina
ENSCSEG00000020669	LSM14B	81	44.311	ENSMLEG00000040895	LSM14B	95	44.571	Mandrillus_leucophaeus
ENSCSEG00000020669	LSM14B	98	61.198	ENSMAMG00000024124	LSM14B	98	60.519	Mastacembelus_armatus
ENSCSEG00000020669	LSM14B	90	44.798	ENSMAMG00000020539	lsm14b	98	45.736	Mastacembelus_armatus
ENSCSEG00000020669	LSM14B	90	46.197	ENSMZEG00005000987	lsm14b	94	47.253	Maylandia_zebra
ENSCSEG00000020669	LSM14B	54	47.170	ENSMZEG00005026087	-	69	48.095	Maylandia_zebra
ENSCSEG00000020669	LSM14B	54	47.642	ENSMZEG00005002688	-	69	48.571	Maylandia_zebra
ENSCSEG00000020669	LSM14B	92	57.895	ENSMZEG00005026001	LSM14B	99	57.029	Maylandia_zebra
ENSCSEG00000020669	LSM14B	84	43.605	ENSMGAG00000005300	LSM14B	99	43.280	Meleagris_gallopavo
ENSCSEG00000020669	LSM14B	92	47.849	ENSMAUG00000020700	Lsm14b	95	47.409	Mesocricetus_auratus
ENSCSEG00000020669	LSM14B	92	48.509	ENSMICG00000014675	LSM14B	95	48.462	Microcebus_murinus
ENSCSEG00000020669	LSM14B	92	48.118	ENSMOCG00000020600	Lsm14b	95	47.668	Microtus_ochrogaster
ENSCSEG00000020669	LSM14B	91	43.514	ENSMMOG00000020042	lsm14b	98	44.072	Mola_mola
ENSCSEG00000020669	LSM14B	92	57.500	ENSMMOG00000017321	LSM14B	99	57.326	Mola_mola
ENSCSEG00000020669	LSM14B	62	36.426	ENSMODG00000016690	LSM14B	99	37.304	Monodelphis_domestica
ENSCSEG00000020669	LSM14B	99	62.016	ENSMALG00000022251	LSM14B	99	61.240	Monopterus_albus
ENSCSEG00000020669	LSM14B	96	46.543	ENSMALG00000004783	lsm14b	96	45.767	Monopterus_albus
ENSCSEG00000020669	LSM14B	92	47.733	MGP_CAROLIEiJ_G0024770	Lsm14b	95	47.927	Mus_caroli
ENSCSEG00000020669	LSM14B	92	47.733	ENSMUSG00000039108	Lsm14b	95	47.927	Mus_musculus
ENSCSEG00000020669	LSM14B	92	48.267	MGP_PahariEiJ_G0026214	Lsm14b	95	48.446	Mus_pahari
ENSCSEG00000020669	LSM14B	92	47.733	MGP_SPRETEiJ_G0025693	Lsm14b	95	47.927	Mus_spretus
ENSCSEG00000020669	LSM14B	87	37.755	ENSMPUG00000007584	LSM14B	96	38.142	Mustela_putorius_furo
ENSCSEG00000020669	LSM14B	91	47.978	ENSMLUG00000000304	LSM14B	95	48.980	Myotis_lucifugus
ENSCSEG00000020669	LSM14B	81	44.611	ENSNLEG00000015757	LSM14B	95	44.857	Nomascus_leucogenys
ENSCSEG00000020669	LSM14B	66	59.310	ENSMEUG00000008267	-	75	60.000	Notamacropus_eugenii
ENSCSEG00000020669	LSM14B	92	47.200	ENSODEG00000004099	LSM14B	95	47.938	Octodon_degus
ENSCSEG00000020669	LSM14B	90	47.175	ENSONIG00000020318	lsm14b	93	49.441	Oreochromis_niloticus
ENSCSEG00000020669	LSM14B	76	42.373	ENSOANG00000003370	LSM14B	98	41.892	Ornithorhynchus_anatinus
ENSCSEG00000020669	LSM14B	82	45.238	ENSOCUG00000006279	LSM14B	96	45.070	Oryctolagus_cuniculus
ENSCSEG00000020669	LSM14B	93	56.077	ENSORLG00000028353	LSM14B	98	55.438	Oryzias_latipes
ENSCSEG00000020669	LSM14B	90	43.251	ENSORLG00000013525	lsm14b	92	47.368	Oryzias_latipes
ENSCSEG00000020669	LSM14B	63	40.152	ENSORLG00020018191	-	94	41.219	Oryzias_latipes_hni
ENSCSEG00000020669	LSM14B	90	46.532	ENSORLG00020020553	lsm14b	92	47.368	Oryzias_latipes_hni
ENSCSEG00000020669	LSM14B	90	46.532	ENSORLG00015016862	lsm14b	92	47.368	Oryzias_latipes_hsok
ENSCSEG00000020669	LSM14B	93	55.956	ENSORLG00015013157	LSM14B	98	55.585	Oryzias_latipes_hsok
ENSCSEG00000020669	LSM14B	90	45.821	ENSOMEG00000023917	lsm14b	92	46.685	Oryzias_melastigma
ENSCSEG00000020669	LSM14B	92	43.099	ENSOGAG00000003915	LSM14B	96	43.357	Otolemur_garnettii
ENSCSEG00000020669	LSM14B	84	40.741	ENSOARG00000014706	LSM14B	95	41.582	Ovis_aries
ENSCSEG00000020669	LSM14B	83	44.118	ENSPPAG00000035799	LSM14B	91	44.382	Pan_paniscus
ENSCSEG00000020669	LSM14B	92	48.128	ENSPPRG00000009197	LSM14B	95	48.718	Panthera_pardus
ENSCSEG00000020669	LSM14B	62	41.502	ENSPTIG00000021518	LSM14B	97	41.791	Panthera_tigris_altaica
ENSCSEG00000020669	LSM14B	92	47.594	ENSPTRG00000013696	LSM14B	95	47.692	Pan_troglodytes
ENSCSEG00000020669	LSM14B	92	47.594	ENSPANG00000011747	LSM14B	95	47.692	Papio_anubis
ENSCSEG00000020669	LSM14B	92	47.696	ENSPKIG00000003275	lsm14b	88	70.103	Paramormyrops_kingsleyae
ENSCSEG00000020669	LSM14B	82	44.144	ENSPSIG00000014762	LSM14B	99	44.262	Pelodiscus_sinensis
ENSCSEG00000020669	LSM14B	92	48.396	ENSPEMG00000017688	Lsm14b	96	48.052	Peromyscus_maniculatus_bairdii
ENSCSEG00000020669	LSM14B	92	46.419	ENSPCIG00000013405	LSM14B	98	47.407	Phascolarctos_cinereus
ENSCSEG00000020669	LSM14B	95	47.027	ENSPFOG00000005631	lsm14b	94	45.479	Poecilia_formosa
ENSCSEG00000020669	LSM14B	91	55.807	ENSPLAG00000005793	LSM14B	97	56.349	Poecilia_latipinna
ENSCSEG00000020669	LSM14B	95	47.297	ENSPLAG00000002449	lsm14b	94	45.745	Poecilia_latipinna
ENSCSEG00000020669	LSM14B	90	56.863	ENSPMEG00000022953	LSM14B	97	56.510	Poecilia_mexicana
ENSCSEG00000020669	LSM14B	91	45.455	ENSPMEG00000000745	lsm14b	92	45.706	Poecilia_mexicana
ENSCSEG00000020669	LSM14B	62	45.000	ENSPREG00000007828	LSM14B	95	46.570	Poecilia_reticulata
ENSCSEG00000020669	LSM14B	92	42.120	ENSPPYG00000011194	LSM14B	95	42.969	Pongo_abelii
ENSCSEG00000020669	LSM14B	92	48.128	ENSPCOG00000013625	LSM14B	95	48.205	Propithecus_coquereli
ENSCSEG00000020669	LSM14B	91	49.454	ENSPNAG00000012777	lsm14b	97	51.282	Pygocentrus_nattereri
ENSCSEG00000020669	LSM14B	92	42.754	ENSRNOG00000054557	Lsm14b	96	43.026	Rattus_norvegicus
ENSCSEG00000020669	LSM14B	82	43.881	ENSRBIG00000033461	LSM14B	95	44.160	Rhinopithecus_bieti
ENSCSEG00000020669	LSM14B	83	44.868	ENSRROG00000042949	LSM14B	95	36.656	Rhinopithecus_roxellana
ENSCSEG00000020669	LSM14B	81	44.377	ENSSBOG00000032820	LSM14B	95	44.928	Saimiri_boliviensis_boliviensis
ENSCSEG00000020669	LSM14B	83	44.868	ENSSHAG00000015528	LSM14B	96	45.257	Sarcophilus_harrisii
ENSCSEG00000020669	LSM14B	91	48.179	ENSSFOG00015004627	lsm14b	97	50.132	Scleropages_formosus
ENSCSEG00000020669	LSM14B	91	46.281	ENSSMAG00000012725	lsm14b	95	47.568	Scophthalmus_maximus
ENSCSEG00000020669	LSM14B	99	62.850	ENSSMAG00000000135	LSM14B	99	63.868	Scophthalmus_maximus
ENSCSEG00000020669	LSM14B	99	66.838	ENSSDUG00000022770	LSM14B	99	67.609	Seriola_dumerili
ENSCSEG00000020669	LSM14B	91	47.339	ENSSDUG00000020977	lsm14b	97	48.698	Seriola_dumerili
ENSCSEG00000020669	LSM14B	69	54.296	ENSSLDG00000011354	-	99	56.294	Seriola_lalandi_dorsalis
ENSCSEG00000020669	LSM14B	53	34.545	ENSSARG00000007749	-	99	35.455	Sorex_araneus
ENSCSEG00000020669	LSM14B	92	42.927	ENSSPUG00000014360	LSM14B	96	43.981	Sphenodon_punctatus
ENSCSEG00000020669	LSM14B	90	45.014	ENSSPAG00000020915	lsm14b	93	46.486	Stegastes_partitus
ENSCSEG00000020669	LSM14B	69	45.965	ENSSPAG00000018854	-	99	44.014	Stegastes_partitus
ENSCSEG00000020669	LSM14B	92	47.425	ENSSSCG00000026052	LSM14B	96	37.217	Sus_scrofa
ENSCSEG00000020669	LSM14B	82	43.491	ENSTGUG00000007884	LSM14B	99	44.199	Taeniopygia_guttata
ENSCSEG00000020669	LSM14B	93	60.274	ENSTRUG00000001529	LSM14B	97	59.686	Takifugu_rubripes
ENSCSEG00000020669	LSM14B	95	48.767	ENSTRUG00000011354	lsm14b	94	46.543	Takifugu_rubripes
ENSCSEG00000020669	LSM14B	91	44.986	ENSTNIG00000002445	lsm14b	93	45.526	Tetraodon_nigroviridis
ENSCSEG00000020669	LSM14B	74	71.795	ENSTTRG00000011043	LSM14B	77	71.795	Tursiops_truncatus
ENSCSEG00000020669	LSM14B	88	41.243	ENSUAMG00000025298	LSM14B	92	42.400	Ursus_americanus
ENSCSEG00000020669	LSM14B	88	41.243	ENSUMAG00000000480	LSM14B	92	42.400	Ursus_maritimus
ENSCSEG00000020669	LSM14B	82	41.867	ENSVVUG00000015920	LSM14B	94	43.103	Vulpes_vulpes
ENSCSEG00000020669	LSM14B	87	44.540	ENSXETG00000001997	lsm14b	100	45.272	Xenopus_tropicalis
ENSCSEG00000020669	LSM14B	90	47.042	ENSXMAG00000010013	lsm14b	94	47.059	Xiphophorus_maculatus