EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSEG00000020711 (Gene tree)
Gene ID
103391498
Gene Symbol
-
Alias
-
Full Name
ribosomal RNA processing protein 1 homolog A
Gene Type
protein_coding
Species
Cynoglossus_semilaevis
Status
putative
Strand
Plus strand
Length
25384 bases
Position
chr16:309576-334959
Accession
103391498
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSEP00000032287Nop52PF05997.121.8e-6511
ENSCSEP00000032282Nop52PF05997.121.9e-6511
ENSCSEP00000032285Nop52PF05997.122.2e-6511
ENSCSEP00000032275Nop52PF05997.122.8e-6511
ENSCSEP00000032277Nop52PF05997.122.8e-6511
ENSCSEP00000032281Nop52PF05997.122.8e-6511
ENSCSEP00000032274Nop52PF05997.123.2e-6511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSET00000032707-2131-ENSCSEP00000032287530 (aa)--
ENSCSET00000032705-5615-ENSCSEP00000032285577 (aa)--
ENSCSET00000032702-5707-ENSCSEP00000032282546 (aa)--
ENSCSET00000032701-6605-ENSCSEP00000032281652 (aa)--
ENSCSET00000032695-6605XM_008327781ENSCSEP00000032275652 (aa)XP_008326003-
ENSCSET00000032694-6764XM_008327777ENSCSEP00000032274705 (aa)XP_008325999UPI00049869A4
ENSCSET00000032697-6605-ENSCSEP00000032277652 (aa)--
Gene Model
Click here to download ENSCSEG00000020711's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020711's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSEG00000020711-7854.945ENSG00000160208RRP1B5954.945Homo_sapiens
ENSCSEG00000020711-6451.445ENSG00000160214RRP18066.667Homo_sapiens
ENSCSEG00000020711-8365.873ENSAPOG00000007490-6563.462Acanthochromis_polyacanthus
ENSCSEG00000020711-7849.451ENSAMEG00000011401RRP1B6155.682Ailuropoda_melanoleuca
ENSCSEG00000020711-8444.766ENSAMEG00000011448RRP18049.176Ailuropoda_melanoleuca
ENSCSEG00000020711-5559.247ENSACIG00000019121rrp16255.799Amphilophus_citrinellus
ENSCSEG00000020711-7967.368ENSAOCG00000017894-10068.085Amphiprion_ocellaris
ENSCSEG00000020711-7268.306ENSAPEG00000024150-7065.347Amphiprion_percula
ENSCSEG00000020711-8365.445ENSATEG00000005045-7055.833Anabas_testudineus
ENSCSEG00000020711-7655.056ENSAPLG00000004310RRP1B5655.056Anas_platyrhynchos
ENSCSEG00000020711-8455.682ENSACAG00000017851RRP1B5555.682Anolis_carolinensis
ENSCSEG00000020711-7854.945ENSANAG00000034889RRP1B5954.945Aotus_nancymaae
ENSCSEG00000020711-6250.746ENSANAG00000037815RRP17551.796Aotus_nancymaae
ENSCSEG00000020711-8043.794ENSBTAG00000003981RRP17948.747Bos_taurus
ENSCSEG00000020711-8049.138ENSBTAG00000017418RRP1B6349.138Bos_taurus
ENSCSEG00000020711-8247.619ENSCJAG00000017077RRP1B6347.619Callithrix_jacchus
ENSCSEG00000020711-6450.432ENSCJAG00000043205RRP17150.432Callithrix_jacchus
ENSCSEG00000020711-7149.451ENSCAFG00000010621RRP1B5752.747Canis_familiaris
ENSCSEG00000020711-8045.103ENSCAFG00000010646RRP18445.274Canis_familiaris
ENSCSEG00000020711-7948.641ENSCAFG00020018901RRP1B6251.020Canis_lupus_dingo
ENSCSEG00000020711-8045.103ENSCAFG00020018979RRP17949.457Canis_lupus_dingo
ENSCSEG00000020711-8043.155ENSCHIG00000020948RRP17947.778Capra_hircus
ENSCSEG00000020711-8048.276ENSCHIG00000021519RRP1B6151.485Capra_hircus
ENSCSEG00000020711-6449.153ENSTSYG00000012831RRP18147.606Carlito_syrichta
ENSCSEG00000020711-5644.578ENSCAPG00000008576RRP18542.899Cavia_aperea
ENSCSEG00000020711-6550.872ENSCPOG00000038986RRP17650.000Cavia_porcellus
ENSCSEG00000020711-7750.538ENSCPOG00000002396RRP1B6150.538Cavia_porcellus
ENSCSEG00000020711-9747.826ENSCCAG00000029384RRP1B7547.826Cebus_capucinus
ENSCSEG00000020711-6451.873ENSCCAG00000029828RRP17551.724Cebus_capucinus
ENSCSEG00000020711-6450.725ENSCATG00000015632RRP17651.130Cercocebus_atys
ENSCSEG00000020711-7851.087ENSCATG00000017423RRP1B5951.087Cercocebus_atys
ENSCSEG00000020711-7353.333ENSCLAG00000005622RRP1B6353.333Chinchilla_lanigera
ENSCSEG00000020711-6550.000ENSCLAG00000011639RRP18048.219Chinchilla_lanigera
ENSCSEG00000020711-7855.682ENSCSAG00000007961RRP1B5953.846Chlorocebus_sabaeus
ENSCSEG00000020711-6150.920ENSCSAG00000007936RRP19850.920Chlorocebus_sabaeus
ENSCSEG00000020711-6342.042ENSCHOG00000002426-5542.042Choloepus_hoffmanni
ENSCSEG00000020711-7655.085ENSCPBG00000010310RRP1B5555.056Chrysemys_picta_bellii
ENSCSEG00000020711-8033.410ENSCING00000003304-7935.598Ciona_intestinalis
ENSCSEG00000020711-5549.505ENSCANG00000042611RRP17049.505Colobus_angolensis_palliatus
ENSCSEG00000020711-7853.846ENSCANG00000040952RRP1B5953.846Colobus_angolensis_palliatus
ENSCSEG00000020711-7948.739ENSCGRG00001010889-5956.989Cricetulus_griseus_chok1gshd
ENSCSEG00000020711-6451.009ENSCGRG00001011920Rrp18150.000Cricetulus_griseus_chok1gshd
ENSCSEG00000020711-7948.739ENSCGRG00001023882-5565.079Cricetulus_griseus_chok1gshd
ENSCSEG00000020711-6451.009ENSCGRG00000008915Rrp18150.000Cricetulus_griseus_crigri
ENSCSEG00000020711-7348.739ENSCGRG00000001553Rrp1b5656.989Cricetulus_griseus_crigri
ENSCSEG00000020711-7161.316ENSCVAG00000017568-9162.674Cyprinodon_variegatus
ENSCSEG00000020711-7853.644ENSDARG00000103337rrp19940.164Danio_rerio
ENSCSEG00000020711-10045.614ENSDNOG00000032774RRP1B8445.614Dasypus_novemcinctus
ENSCSEG00000020711-8642.038ENSDNOG00000019880RRP18146.995Dasypus_novemcinctus
ENSCSEG00000020711-6353.061ENSDORG00000005496Rrp1b5253.061Dipodomys_ordii
ENSCSEG00000020711-5644.951ENSDORG00000002104Rrp17943.902Dipodomys_ordii
ENSCSEG00000020711-8552.273ENSETEG00000019489RRP1B5851.648Echinops_telfairi
ENSCSEG00000020711-6142.378ENSETEG00000002963-7242.378Echinops_telfairi
ENSCSEG00000020711-7048.806ENSEASG00005001673RRP18548.806Equus_asinus_asinus
ENSCSEG00000020711-7853.846ENSEASG00005001687RRP1B5953.846Equus_asinus_asinus
ENSCSEG00000020711-7853.846ENSECAG00000018018RRP1B5953.846Equus_caballus
ENSCSEG00000020711-7048.942ENSECAG00000015703RRP18548.942Equus_caballus
ENSCSEG00000020711-8261.558ENSELUG00000015885-8761.461Esox_lucius
ENSCSEG00000020711-6849.725ENSFCAG00000008434RRP18049.725Felis_catus
ENSCSEG00000020711-9051.579ENSFCAG00000010272RRP1B8151.579Felis_catus
ENSCSEG00000020711-6754.286ENSFALG00000002024RRP1B5654.717Ficedula_albicollis
ENSCSEG00000020711-7048.913ENSFDAG00000010899RRP1B5648.913Fukomys_damarensis
ENSCSEG00000020711-6848.066ENSFDAG00000013728RRP17948.066Fukomys_damarensis
ENSCSEG00000020711-8461.619ENSFHEG00000016314-6160.263Fundulus_heteroclitus
ENSCSEG00000020711-8061.708ENSGMOG00000001953-6760.695Gadus_morhua
ENSCSEG00000020711-8353.409ENSGALG00000035696RRP1B5754.017Gallus_gallus
ENSCSEG00000020711-8859.574ENSGACG00000001438rrp110048.353Gasterosteus_aculeatus
ENSCSEG00000020711-7656.044ENSGAGG00000000375RRP1B5756.044Gopherus_agassizii
ENSCSEG00000020711-7854.945ENSGGOG00000012069RRP1B5954.945Gorilla_gorilla
ENSCSEG00000020711-6451.734ENSGGOG00000000173RRP17551.714Gorilla_gorilla
ENSCSEG00000020711-6450.442ENSHGLG00000017085RRP17648.343Heterocephalus_glaber_female
ENSCSEG00000020711-7752.273ENSHGLG00000004968RRP1B5952.273Heterocephalus_glaber_female
ENSCSEG00000020711-6752.273ENSHGLG00100002232RRP1B5849.451Heterocephalus_glaber_male
ENSCSEG00000020711-8059.902ENSHCOG00000018388-5759.902Hippocampus_comes
ENSCSEG00000020711-7456.980ENSIPUG00000000673-9246.850Ictalurus_punctatus
ENSCSEG00000020711-7552.747ENSSTOG00000011790RRP1B6152.747Ictidomys_tridecemlineatus
ENSCSEG00000020711-6449.118ENSSTOG00000011116RRP17749.118Ictidomys_tridecemlineatus
ENSCSEG00000020711-9445.210ENSJJAG00000021279Rrp1b5658.140Jaculus_jaculus
ENSCSEG00000020711-6449.560ENSJJAG00000018886Rrp18147.658Jaculus_jaculus
ENSCSEG00000020711-9860.482ENSKMAG00000005539rrp110048.686Kryptolebias_marmoratus
ENSCSEG00000020711-6664.228ENSLBEG00000021417RRP19764.962Labrus_bergylta
ENSCSEG00000020711-8048.656ENSLACG00000017332-5949.730Latimeria_chalumnae
ENSCSEG00000020711-7660.458ENSLOCG00000004064-6060.218Lepisosteus_oculatus
ENSCSEG00000020711-6848.518ENSLAFG00000000766RRP1B8748.518Loxodonta_africana
ENSCSEG00000020711-5855.172ENSLAFG00000022901RRP18445.093Loxodonta_africana
ENSCSEG00000020711-7853.846ENSMFAG00000039152RRP1B5953.846Macaca_fascicularis
ENSCSEG00000020711-6452.011ENSMFAG00000003202RRP17551.862Macaca_fascicularis
ENSCSEG00000020711-6450.578ENSMMUG00000012304RRP17550.862Macaca_mulatta
ENSCSEG00000020711-8549.596ENSMMUG00000000104RRP1B6052.747Macaca_mulatta
ENSCSEG00000020711-7852.747ENSMNEG00000034269RRP1B5952.747Macaca_nemestrina
ENSCSEG00000020711-6451.437ENSMNEG00000031210RRP17551.289Macaca_nemestrina
ENSCSEG00000020711-7153.846ENSMLEG00000040044RRP1B5653.846Mandrillus_leucophaeus
ENSCSEG00000020711-5850.637ENSMLEG00000037797RRP17350.637Mandrillus_leucophaeus
ENSCSEG00000020711-6874.000ENSMGAG00000014591RRP1B5374.000Meleagris_gallopavo
ENSCSEG00000020711-6441.159ENSMAUG00000017653Rrp17942.857Mesocricetus_auratus
ENSCSEG00000020711-8444.375ENSMAUG00000021508Rrp1b5555.914Mesocricetus_auratus
ENSCSEG00000020711-6449.714ENSMICG00000004700RRP17849.714Microcebus_murinus
ENSCSEG00000020711-8055.435ENSMICG00000004686RRP1B6255.435Microcebus_murinus
ENSCSEG00000020711-7455.682ENSMOCG00000001117Rrp1b5755.682Microtus_ochrogaster
ENSCSEG00000020711-8137.838ENSMOCG00000015687Rrp18441.565Microtus_ochrogaster
ENSCSEG00000020711-6862.772ENSMMOG00000019175rrp19561.905Mola_mola
ENSCSEG00000020711-9951.130ENSMODG00000021033RRP1B5853.846Monodelphis_domestica
ENSCSEG00000020711-8336.452ENSMODG00000021036-5249.714Monodelphis_domestica
ENSCSEG00000020711-7266.492ENSMALG00000010310rrp19866.223Monopterus_albus
ENSCSEG00000020711-7553.763MGP_CAROLIEiJ_G0021376Rrp1b5361.905Mus_caroli
ENSCSEG00000020711-6451.331MGP_CAROLIEiJ_G0015508Rrp18443.810Mus_caroli
ENSCSEG00000020711-6453.252ENSMUSG00000061032Rrp18443.333Mus_musculus
ENSCSEG00000020711-7253.763ENSMUSG00000058392Rrp1b5363.492Mus_musculus
ENSCSEG00000020711-5857.377MGP_PahariEiJ_G0030921Rrp18443.839Mus_pahari
ENSCSEG00000020711-7553.763MGP_PahariEiJ_G0023695Rrp1b5361.905Mus_pahari
ENSCSEG00000020711-6453.252MGP_SPRETEiJ_G0016321Rrp18443.571Mus_spretus
ENSCSEG00000020711-9453.763MGP_SPRETEiJ_G0022290Rrp1b5363.492Mus_spretus
ENSCSEG00000020711-6355.061ENSMPUG00000009826RRP18644.630Mustela_putorius_furo
ENSCSEG00000020711-5643.377ENSMPUG00000009810RRP1B5142.038Mustela_putorius_furo
ENSCSEG00000020711-8149.582ENSMLUG00000007738RRP1B5953.409Myotis_lucifugus
ENSCSEG00000020711-5956.250ENSMLUG00000017788RRP16754.656Myotis_lucifugus
ENSCSEG00000020711-7353.846ENSNGAG00000021073Rrp1b5753.846Nannospalax_galili
ENSCSEG00000020711-5550.000ENSNGAG00000022344Rrp18039.949Nannospalax_galili
ENSCSEG00000020711-7854.945ENSNLEG00000001490RRP1B6154.945Nomascus_leucogenys
ENSCSEG00000020711-6451.873ENSNLEG00000034734RRP17552.000Nomascus_leucogenys
ENSCSEG00000020711-6461.864ENSMEUG00000003226-5961.864Notamacropus_eugenii
ENSCSEG00000020711-6444.737ENSOPRG00000001319RRP19444.737Ochotona_princeps
ENSCSEG00000020711-7356.322ENSODEG00000013177RRP1B5856.322Octodon_degus
ENSCSEG00000020711-8059.420ENSONIG00000004264rrp16161.027Oreochromis_niloticus
ENSCSEG00000020711-6449.558ENSOANG00000006472-10044.772Ornithorhynchus_anatinus
ENSCSEG00000020711-8052.809ENSOANG00000006470RRP1B6052.809Ornithorhynchus_anatinus
ENSCSEG00000020711-6654.945ENSOCUG00000025931RRP1B5554.945Oryctolagus_cuniculus
ENSCSEG00000020711-8658.438ENSORLG00020007199-5660.638Oryzias_latipes_hni
ENSCSEG00000020711-8662.069ENSORLG00015004425-5460.367Oryzias_latipes_hsok
ENSCSEG00000020711-8160.052ENSOMEG00000016910-5859.948Oryzias_melastigma
ENSCSEG00000020711-7148.177ENSOGAG00000006105RRP18849.235Otolemur_garnettii
ENSCSEG00000020711-7258.667ENSOGAG00000009872RRP1B9938.000Otolemur_garnettii
ENSCSEG00000020711-6149.074ENSOARG00000011434RRP17349.074Ovis_aries
ENSCSEG00000020711-7345.690ENSOARG00000011314RRP1B6046.667Ovis_aries
ENSCSEG00000020711-6451.445ENSPPAG00000029050RRP17551.429Pan_paniscus
ENSCSEG00000020711-7154.945ENSPPAG00000035319RRP1B5654.945Pan_paniscus
ENSCSEG00000020711-8852.083ENSPPRG00000010356RRP1B8152.083Panthera_pardus
ENSCSEG00000020711-7048.930ENSPPRG00000010656RRP18348.930Panthera_pardus
ENSCSEG00000020711-5743.450ENSPTIG00000019473RRP17043.450Panthera_tigris_altaica
ENSCSEG00000020711-7152.083ENSPTIG00000016894RRP1B6852.083Panthera_tigris_altaica
ENSCSEG00000020711-6451.734ENSPTRG00000013962RRP17551.714Pan_troglodytes
ENSCSEG00000020711-7856.044ENSPTRG00000013958RRP1B5956.044Pan_troglodytes
ENSCSEG00000020711-6451.014ENSPANG00000015097RRP17551.576Papio_anubis
ENSCSEG00000020711-7850.000ENSPANG00000011090RRP1B5953.261Papio_anubis
ENSCSEG00000020711-9254.695ENSPKIG00000003422-5958.268Paramormyrops_kingsleyae
ENSCSEG00000020711-7656.180ENSPSIG00000008152RRP1B5756.180Pelodiscus_sinensis
ENSCSEG00000020711-6851.604ENSPMGG00000007512-9251.026Periophthalmus_magnuspinnatus
ENSCSEG00000020711-7554.839ENSPEMG00000022490Rrp1b5954.839Peromyscus_maniculatus_bairdii
ENSCSEG00000020711-6449.709ENSPEMG00000018421Rrp18249.319Peromyscus_maniculatus_bairdii
ENSCSEG00000020711-7852.688ENSPCIG00000015513RRP1B6352.688Phascolarctos_cinereus
ENSCSEG00000020711-6448.415ENSPCIG00000015523-7647.458Phascolarctos_cinereus
ENSCSEG00000020711-8064.474ENSPFOG00000007424-6064.474Poecilia_formosa
ENSCSEG00000020711-7364.541ENSPLAG00000016684-5365.426Poecilia_latipinna
ENSCSEG00000020711-8264.541ENSPMEG00000007042-5565.426Poecilia_mexicana
ENSCSEG00000020711-8760.526ENSPREG00000015673-5565.205Poecilia_reticulata
ENSCSEG00000020711-7854.945ENSPPYG00000011470RRP1B5954.945Pongo_abelii
ENSCSEG00000020711-6452.023ENSPPYG00000011474RRP17551.724Pongo_abelii
ENSCSEG00000020711-8255.435ENSPCOG00000017927RRP1B6255.435Propithecus_coquereli
ENSCSEG00000020711-6448.433ENSPCOG00000017706RRP18446.234Propithecus_coquereli
ENSCSEG00000020711-8353.333ENSPVAG00000001436RRP1B5852.809Pteropus_vampyrus
ENSCSEG00000020711-9343.103ENSRNOG00000001194Rrp1b7854.839Rattus_norvegicus
ENSCSEG00000020711-6450.000ENSRNOG00000001203Rrp18249.062Rattus_norvegicus
ENSCSEG00000020711-7854.945ENSRBIG00000041689RRP1B5854.945Rhinopithecus_bieti
ENSCSEG00000020711-6451.014ENSRBIG00000032082RRP17551.576Rhinopithecus_bieti
ENSCSEG00000020711-7854.945ENSRROG00000031499RRP1B5954.945Rhinopithecus_roxellana
ENSCSEG00000020711-6451.014ENSRROG00000039799RRP17551.576Rhinopithecus_roxellana
ENSCSEG00000020711-6451.312ENSSBOG00000034689RRP17551.014Saimiri_boliviensis_boliviensis
ENSCSEG00000020711-7153.846ENSSBOG00000034727RRP1B5753.846Saimiri_boliviensis_boliviensis
ENSCSEG00000020711-7753.763ENSSHAG00000017789RRP1B5953.763Sarcophilus_harrisii
ENSCSEG00000020711-5649.164ENSSHAG00000010304-9249.164Sarcophilus_harrisii
ENSCSEG00000020711-9248.628ENSSFOG00015003932-6062.637Scleropages_formosus
ENSCSEG00000020711-8766.828ENSSMAG00000016847-9167.989Scophthalmus_maximus
ENSCSEG00000020711-8668.687ENSSDUG00000000551-5168.687Seriola_dumerili
ENSCSEG00000020711-8268.687ENSSLDG00000002538-5168.687Seriola_lalandi_dorsalis
ENSCSEG00000020711-7841.135ENSSARG00000003108-5352.809Sorex_araneus
ENSCSEG00000020711-7451.685ENSSPUG00000002834RRP1B6651.685Sphenodon_punctatus
ENSCSEG00000020711-8167.708ENSSPAG00000005370-6667.708Stegastes_partitus
ENSCSEG00000020711-7954.545ENSSSCG00000021698RRP1B6949.515Sus_scrofa
ENSCSEG00000020711-6848.045ENSSSCG00000037061RRP17948.493Sus_scrofa
ENSCSEG00000020711-7353.704ENSTGUG00000005926RRP1B5559.302Taeniopygia_guttata
ENSCSEG00000020711-6663.305ENSTRUG00000017592rrp110063.305Takifugu_rubripes
ENSCSEG00000020711-9346.729ENSTNIG00000005053rrp16763.764Tetraodon_nigroviridis
ENSCSEG00000020711-9036.160ENSTBEG00000000422RRP1B6846.866Tupaia_belangeri
ENSCSEG00000020711-5743.791ENSTBEG00000001260-5243.791Tupaia_belangeri
ENSCSEG00000020711-8047.671ENSTTRG00000000723RRP1B7045.545Tursiops_truncatus
ENSCSEG00000020711-5349.412ENSTTRG00000011162RRP16349.412Tursiops_truncatus
ENSCSEG00000020711-7951.579ENSUAMG00000026765RRP1B6650.515Ursus_americanus
ENSCSEG00000020711-5939.375ENSUAMG00000014189-7343.028Ursus_americanus
ENSCSEG00000020711-7251.579ENSUMAG00000025510RRP1B9839.636Ursus_maritimus
ENSCSEG00000020711-7644.417ENSUMAG00000025507RRP17847.522Ursus_maritimus
ENSCSEG00000020711-7149.451ENSVVUG00000024509RRP1B5752.747Vulpes_vulpes
ENSCSEG00000020711-5140.625ENSVVUG00000024498-5745.378Vulpes_vulpes
ENSCSEG00000020711-7156.140ENSXETG00000013683rrp1b9836.378Xenopus_tropicalis
ENSCSEG00000020711-9058.629ENSXMAG00000023123-6163.539Xiphophorus_maculatus

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