EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000020737 (Gene tree)
Gene ID: 103380890
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 10899 bases
Position: chr7:5405431-5416329
Accession: 103380890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000032324	RRM_1	PF00076.22	2.8e-09	1	1
ENSCSEP00000032323	RRM_1	PF00076.22	3.1e-09	1	1
ENSCSEP00000032324	PWI	PF01480.17	2.6e-13	1	1
ENSCSEP00000032323	PWI	PF01480.17	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000032743	-	4870	XM_008313025	ENSCSEP00000032323	803 (aa)	XP_008311247	UPI000496FDA8
ENSCSET00000032744	-	2284	-	ENSCSEP00000032324	753 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000020737's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020737's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000020737	rbm25b	57	71.490	ENSCSEG00000009430	rbm25a	62	68.588

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020737	rbm25b	58	85.591	ENSAPOG00000015321	rbm25b	58	86.994	Acanthochromis_polyacanthus
ENSCSEG00000020737	rbm25b	56	75.599	ENSAPOG00000017757	rbm25a	60	73.118	Acanthochromis_polyacanthus
ENSCSEG00000020737	rbm25b	58	82.618	ENSACIG00000014178	rbm25b	100	78.947	Amphilophus_citrinellus
ENSCSEG00000020737	rbm25b	56	75.711	ENSACIG00000019482	rbm25a	56	74.627	Amphilophus_citrinellus
ENSCSEG00000020737	rbm25b	56	74.670	ENSAOCG00000013695	rbm25a	56	76.190	Amphiprion_ocellaris
ENSCSEG00000020737	rbm25b	55	79.341	ENSAOCG00000019308	rbm25b	58	83.519	Amphiprion_ocellaris
ENSCSEG00000020737	rbm25b	59	84.664	ENSAPEG00000009666	rbm25b	61	85.504	Amphiprion_percula
ENSCSEG00000020737	rbm25b	56	75.435	ENSAPEG00000007514	rbm25a	56	76.190	Amphiprion_percula
ENSCSEG00000020737	rbm25b	58	87.152	ENSATEG00000017312	rbm25b	59	86.498	Anabas_testudineus
ENSCSEG00000020737	rbm25b	58	74.522	ENSATEG00000020676	rbm25a	63	73.585	Anabas_testudineus
ENSCSEG00000020737	rbm25b	55	73.182	ENSAPLG00000006643	RBM25	56	73.602	Anas_platyrhynchos
ENSCSEG00000020737	rbm25b	52	73.671	ENSACAG00000016239	RBM25	86	71.910	Anolis_carolinensis
ENSCSEG00000020737	rbm25b	89	75.172	ENSACLG00000027482	rbm25a	100	59.450	Astatotilapia_calliptera
ENSCSEG00000020737	rbm25b	52	73.759	ENSAMXG00000024525	rbm25b	63	76.892	Astyanax_mexicanus
ENSCSEG00000020737	rbm25b	71	42.657	WBGene00012245	W04D2.6	86	34.216	Caenorhabditis_elegans
ENSCSEG00000020737	rbm25b	55	77.348	ENSCAPG00000005239	RBM25	77	78.212	Cavia_aperea
ENSCSEG00000020737	rbm25b	68	83.784	ENSCHOG00000008903	RBM25	63	84.286	Choloepus_hoffmanni
ENSCSEG00000020737	rbm25b	90	41.702	ENSCSAVG00000010097	-	61	43.309	Ciona_savignyi
ENSCSEG00000020737	rbm25b	86	67.150	ENSCANG00000043874	RBM25	98	67.014	Colobus_angolensis_palliatus
ENSCSEG00000020737	rbm25b	99	68.365	ENSCGRG00001020817	Rbm25	100	63.905	Cricetulus_griseus_chok1gshd
ENSCSEG00000020737	rbm25b	59	82.231	ENSCVAG00000003478	rbm25b	100	79.828	Cyprinodon_variegatus
ENSCSEG00000020737	rbm25b	69	80.162	ENSCVAG00000005498	rbm25a	99	74.932	Cyprinodon_variegatus
ENSCSEG00000020737	rbm25b	51	68.000	ENSDARG00000039266	rbm25a	99	93.671	Danio_rerio
ENSCSEG00000020737	rbm25b	52	73.671	ENSDORG00000013247	Rbm25	86	71.910	Dipodomys_ordii
ENSCSEG00000020737	rbm25b	91	73.874	FBgn0028474	CG4119	73	70.079	Drosophila_melanogaster
ENSCSEG00000020737	rbm25b	52	75.735	ENSETEG00000015941	RBM25	86	73.349	Echinops_telfairi
ENSCSEG00000020737	rbm25b	71	37.601	ENSEBUG00000002963	rbm25b	67	41.492	Eptatretus_burgeri
ENSCSEG00000020737	rbm25b	85	74.083	ENSEEUG00000007350	RBM25	81	73.839	Erinaceus_europaeus
ENSCSEG00000020737	rbm25b	54	68.150	ENSELUG00000021847	rbm25a	52	66.900	Esox_lucius
ENSCSEG00000020737	rbm25b	58	76.240	ENSELUG00000007730	rbm25b	59	76.375	Esox_lucius
ENSCSEG00000020737	rbm25b	55	72.562	ENSFALG00000005445	RBM25	86	73.154	Ficedula_albicollis
ENSCSEG00000020737	rbm25b	58	84.861	ENSFHEG00000003513	rbm25b	99	83.522	Fundulus_heteroclitus
ENSCSEG00000020737	rbm25b	57	67.316	ENSFHEG00000005318	rbm25a	60	67.816	Fundulus_heteroclitus
ENSCSEG00000020737	rbm25b	87	80.000	ENSGMOG00000014097	rbm25b	91	75.620	Gadus_morhua
ENSCSEG00000020737	rbm25b	81	70.815	ENSGMOG00000014070	rbm25a	87	70.938	Gadus_morhua
ENSCSEG00000020737	rbm25b	100	70.927	ENSGAFG00000018036	rbm25a	58	72.609	Gambusia_affinis
ENSCSEG00000020737	rbm25b	98	83.847	ENSGAFG00000001092	rbm25b	52	84.711	Gambusia_affinis
ENSCSEG00000020737	rbm25b	52	70.673	ENSGAGG00000024524	RBM25	85	69.955	Gopherus_agassizii
ENSCSEG00000020737	rbm25b	56	75.055	ENSHBUG00000016908	rbm25a	56	74.894	Haplochromis_burtoni
ENSCSEG00000020737	rbm25b	100	77.415	ENSHCOG00000000142	rbm25b	58	78.525	Hippocampus_comes
ENSCSEG00000020737	rbm25b	73	65.591	ENSHCOG00000018433	rbm25a	79	68.953	Hippocampus_comes
ENSCSEG00000020737	rbm25b	57	87.118	ENSKMAG00000018826	rbm25b	100	82.555	Kryptolebias_marmoratus
ENSCSEG00000020737	rbm25b	57	78.088	ENSKMAG00000016242	rbm25a	57	74.023	Kryptolebias_marmoratus
ENSCSEG00000020737	rbm25b	100	85.879	ENSLBEG00000010667	rbm25b	62	91.632	Labrus_bergylta
ENSCSEG00000020737	rbm25b	55	73.602	ENSLOCG00000014196	rbm25b	55	73.614	Lepisosteus_oculatus
ENSCSEG00000020737	rbm25b	52	73.913	ENSMNEG00000032922	RBM25	86	72.135	Macaca_nemestrina
ENSCSEG00000020737	rbm25b	55	78.076	ENSMAMG00000004524	rbm25b	100	87.160	Mastacembelus_armatus
ENSCSEG00000020737	rbm25b	50	75.309	ENSMAMG00000000165	rbm25a	61	68.590	Mastacembelus_armatus
ENSCSEG00000020737	rbm25b	56	75.055	ENSMZEG00005011183	rbm25a	57	75.917	Maylandia_zebra
ENSCSEG00000020737	rbm25b	52	73.913	ENSMOCG00000001935	Rbm25	86	72.135	Microtus_ochrogaster
ENSCSEG00000020737	rbm25b	58	73.233	ENSMMOG00000009065	rbm25a	57	75.111	Mola_mola
ENSCSEG00000020737	rbm25b	100	76.143	ENSMMOG00000015545	rbm25b	64	85.350	Mola_mola
ENSCSEG00000020737	rbm25b	52	74.155	ENSMODG00000006820	RBM25	85	72.360	Monodelphis_domestica
ENSCSEG00000020737	rbm25b	59	85.744	ENSMALG00000020441	rbm25b	91	85.565	Monopterus_albus
ENSCSEG00000020737	rbm25b	52	73.913	MGP_CAROLIEiJ_G0017921	Rbm25	96	71.123	Mus_caroli
ENSCSEG00000020737	rbm25b	52	73.913	ENSMUSG00000010608	Rbm25	96	71.123	Mus_musculus
ENSCSEG00000020737	rbm25b	52	73.913	MGP_PahariEiJ_G0029677	Rbm25	96	71.123	Mus_pahari
ENSCSEG00000020737	rbm25b	52	73.913	MGP_SPRETEiJ_G0018766	-	96	71.123	Mus_spretus
ENSCSEG00000020737	rbm25b	52	73.913	ENSMPUG00000003698	RBM25	83	72.135	Mustela_putorius_furo
ENSCSEG00000020737	rbm25b	52	73.913	ENSNGAG00000018465	Rbm25	86	72.135	Nannospalax_galili
ENSCSEG00000020737	rbm25b	56	75.274	ENSNBRG00000003761	rbm25a	61	70.588	Neolamprologus_brichardi
ENSCSEG00000020737	rbm25b	51	83.871	ENSOPRG00000016744	-	52	79.310	Ochotona_princeps
ENSCSEG00000020737	rbm25b	52	73.913	ENSOANG00000001056	RBM25	85	72.135	Ornithorhynchus_anatinus
ENSCSEG00000020737	rbm25b	100	61.005	ENSOCUG00000013737	RBM25	86	72.135	Oryctolagus_cuniculus
ENSCSEG00000020737	rbm25b	58	84.335	ENSORLG00000011874	rbm25b	99	80.617	Oryzias_latipes
ENSCSEG00000020737	rbm25b	58	84.549	ENSORLG00020016422	rbm25b	57	84.549	Oryzias_latipes_hni
ENSCSEG00000020737	rbm25b	72	66.912	ENSORLG00015022499	rbm25a	54	61.125	Oryzias_latipes_hsok
ENSCSEG00000020737	rbm25b	58	84.549	ENSORLG00015011269	rbm25b	99	80.617	Oryzias_latipes_hsok
ENSCSEG00000020737	rbm25b	58	84.764	ENSOMEG00000023172	rbm25b	100	81.527	Oryzias_melastigma
ENSCSEG00000020737	rbm25b	53	70.705	ENSOMEG00000022138	rbm25a	59	69.739	Oryzias_melastigma
ENSCSEG00000020737	rbm25b	52	74.092	ENSOGAG00000014986	RBM25	53	72.135	Otolemur_garnettii
ENSCSEG00000020737	rbm25b	58	74.788	ENSPKIG00000003203	rbm25b	58	75.262	Paramormyrops_kingsleyae
ENSCSEG00000020737	rbm25b	52	73.671	ENSPSIG00000006058	RBM25	86	71.910	Pelodiscus_sinensis
ENSCSEG00000020737	rbm25b	50	66.750	ENSPMGG00000001791	rbm25a	100	67.153	Periophthalmus_magnuspinnatus
ENSCSEG00000020737	rbm25b	59	83.716	ENSPMGG00000015740	rbm25b	100	80.419	Periophthalmus_magnuspinnatus
ENSCSEG00000020737	rbm25b	52	66.908	ENSPCIG00000011166	RBM25	80	72.680	Phascolarctos_cinereus
ENSCSEG00000020737	rbm25b	58	83.507	ENSPFOG00000018808	rbm25b	100	80.508	Poecilia_formosa
ENSCSEG00000020737	rbm25b	100	72.362	ENSPLAG00000018338	rbm25a	56	75.847	Poecilia_latipinna
ENSCSEG00000020737	rbm25b	100	72.180	ENSPMEG00000024470	rbm25a	56	75.847	Poecilia_mexicana
ENSCSEG00000020737	rbm25b	58	83.299	ENSPMEG00000019161	rbm25b	100	80.508	Poecilia_mexicana
ENSCSEG00000020737	rbm25b	56	74.009	ENSPREG00000009228	rbm25a	57	75.223	Poecilia_reticulata
ENSCSEG00000020737	rbm25b	58	83.195	ENSPREG00000008522	rbm25b	100	80.676	Poecilia_reticulata
ENSCSEG00000020737	rbm25b	89	68.365	ENSPCAG00000006226	RBM25	79	72.135	Procavia_capensis
ENSCSEG00000020737	rbm25b	52	73.913	ENSPVAG00000003931	RBM25	86	72.135	Pteropus_vampyrus
ENSCSEG00000020737	rbm25b	57	73.650	ENSPNYG00000022596	rbm25a	54	75.917	Pundamilia_nyererei
ENSCSEG00000020737	rbm25b	55	71.581	ENSPNAG00000012024	rbm25b	91	75.646	Pygocentrus_nattereri
ENSCSEG00000020737	rbm25b	52	74.396	ENSRNOG00000002871	Rbm25l1	55	71.868	Rattus_norvegicus
ENSCSEG00000020737	rbm25b	62	77.083	ENSSBOG00000034153	RBM25	51	66.190	Saimiri_boliviensis_boliviensis
ENSCSEG00000020737	rbm25b	52	74.155	ENSSHAG00000012859	RBM25	86	72.360	Sarcophilus_harrisii
ENSCSEG00000020737	rbm25b	58	75.480	ENSSFOG00015007093	rbm25	58	75.738	Scleropages_formosus
ENSCSEG00000020737	rbm25b	59	82.008	ENSSMAG00000002520	rbm25b	62	89.300	Scophthalmus_maximus
ENSCSEG00000020737	rbm25b	58	75.053	ENSSMAG00000009745	rbm25a	57	74.681	Scophthalmus_maximus
ENSCSEG00000020737	rbm25b	56	75.764	ENSSDUG00000017984	rbm25a	60	73.608	Seriola_dumerili
ENSCSEG00000020737	rbm25b	57	88.865	ENSSLDG00000024573	rbm25b	100	88.865	Seriola_lalandi_dorsalis
ENSCSEG00000020737	rbm25b	56	75.764	ENSSLDG00000010342	rbm25a	59	73.608	Seriola_lalandi_dorsalis
ENSCSEG00000020737	rbm25b	59	82.040	ENSSPAG00000016168	rbm25b	100	85.961	Stegastes_partitus
ENSCSEG00000020737	rbm25b	56	73.036	ENSSPAG00000011114	rbm25a	58	73.251	Stegastes_partitus
ENSCSEG00000020737	rbm25b	58	72.068	ENSTRUG00000003076	rbm25a	60	70.675	Takifugu_rubripes
ENSCSEG00000020737	rbm25b	58	88.437	ENSTRUG00000017964	rbm25b	59	87.553	Takifugu_rubripes
ENSCSEG00000020737	rbm25b	96	75.218	ENSTNIG00000012222	rbm25b	86	84.681	Tetraodon_nigroviridis
ENSCSEG00000020737	rbm25b	61	78.155	ENSTBEG00000010538	-	64	78.155	Tupaia_belangeri
ENSCSEG00000020737	rbm25b	82	77.083	ENSVPAG00000009052	RBM25	86	67.672	Vicugna_pacos
ENSCSEG00000020737	rbm25b	95	64.112	ENSXETG00000021857	rbm25	57	75.281	Xenopus_tropicalis
ENSCSEG00000020737	rbm25b	100	81.934	ENSXCOG00000002222	rbm25b	57	78.714	Xiphophorus_couchianus
ENSCSEG00000020737	rbm25b	100	70.136	ENSXCOG00000004043	RBM25	59	70.638	Xiphophorus_couchianus
ENSCSEG00000020737	rbm25b	57	68.750	ENSXMAG00000009077	RBM25	60	68.555	Xiphophorus_maculatus
ENSCSEG00000020737	rbm25b	100	84.439	ENSXMAG00000017290	rbm25b	100	80.580	Xiphophorus_maculatus