EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000020899 (Gene tree)
Gene ID: 103380911
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 18233 bases
Position: chr7:6010752-6028984
Accession: 103380911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000032580	PUF	PF00806.19	6.9e-68	1	7
ENSCSEP00000032580	PUF	PF00806.19	6.9e-68	2	7
ENSCSEP00000032580	PUF	PF00806.19	6.9e-68	3	7
ENSCSEP00000032580	PUF	PF00806.19	6.9e-68	4	7
ENSCSEP00000032580	PUF	PF00806.19	6.9e-68	5	7
ENSCSEP00000032580	PUF	PF00806.19	6.9e-68	6	7
ENSCSEP00000032580	PUF	PF00806.19	6.9e-68	7	7
ENSCSEP00000032588	PUF	PF00806.19	4.2e-66	1	7
ENSCSEP00000032588	PUF	PF00806.19	4.2e-66	2	7
ENSCSEP00000032588	PUF	PF00806.19	4.2e-66	3	7
ENSCSEP00000032588	PUF	PF00806.19	4.2e-66	4	7
ENSCSEP00000032588	PUF	PF00806.19	4.2e-66	5	7
ENSCSEP00000032588	PUF	PF00806.19	4.2e-66	6	7
ENSCSEP00000032588	PUF	PF00806.19	4.2e-66	7	7
ENSCSEP00000032578	PUF	PF00806.19	7.7e-66	1	7
ENSCSEP00000032578	PUF	PF00806.19	7.7e-66	2	7
ENSCSEP00000032578	PUF	PF00806.19	7.7e-66	3	7
ENSCSEP00000032578	PUF	PF00806.19	7.7e-66	4	7
ENSCSEP00000032578	PUF	PF00806.19	7.7e-66	5	7
ENSCSEP00000032578	PUF	PF00806.19	7.7e-66	6	7
ENSCSEP00000032578	PUF	PF00806.19	7.7e-66	7	7
ENSCSEP00000032585	PUF	PF00806.19	7.7e-66	1	7
ENSCSEP00000032585	PUF	PF00806.19	7.7e-66	2	7
ENSCSEP00000032585	PUF	PF00806.19	7.7e-66	3	7
ENSCSEP00000032585	PUF	PF00806.19	7.7e-66	4	7
ENSCSEP00000032585	PUF	PF00806.19	7.7e-66	5	7
ENSCSEP00000032585	PUF	PF00806.19	7.7e-66	6	7
ENSCSEP00000032585	PUF	PF00806.19	7.7e-66	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033006	-	6803	XM_008313045	ENSCSEP00000032585	1210 (aa)	XP_008311267	UPI000D6268AE
ENSCSET00000032999	-	6835	XM_017033610	ENSCSEP00000032578	1210 (aa)	XP_016889099	UPI000D6268AE
ENSCSET00000033009	-	5367	-	ENSCSEP00000032588	1134 (aa)	-	-
ENSCSET00000033001	-	6763	XM_008313048	ENSCSEP00000032580	1186 (aa)	XP_008311270	-

Gene Model

Click here to download ENSCSEG00000020899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000020899	pum2	90	63.071	ENSCSEG00000015981	pum1	93	79.954

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020899	pum2	89	77.689	ENSG00000055917	PUM2	97	84.257	Homo_sapiens
ENSCSEG00000020899	pum2	89	88.563	ENSAPOG00000015756	pum2	100	88.465	Acanthochromis_polyacanthus
ENSCSEG00000020899	pum2	89	78.088	ENSAMEG00000002823	PUM2	100	74.653	Ailuropoda_melanoleuca
ENSCSEG00000020899	pum2	90	98.529	ENSACIG00000010646	pum2	96	98.529	Amphilophus_citrinellus
ENSCSEG00000020899	pum2	99	91.371	ENSAOCG00000016619	pum2	99	91.674	Amphiprion_ocellaris
ENSCSEG00000020899	pum2	100	92.993	ENSAPEG00000019924	pum2	100	93.157	Amphiprion_percula
ENSCSEG00000020899	pum2	100	92.251	ENSATEG00000015030	pum2	100	92.333	Anabas_testudineus
ENSCSEG00000020899	pum2	100	72.546	ENSAPLG00000010496	PUM2	98	83.814	Anas_platyrhynchos
ENSCSEG00000020899	pum2	89	77.092	ENSACAG00000010491	PUM2	97	83.592	Anolis_carolinensis
ENSCSEG00000020899	pum2	89	77.689	ENSANAG00000021807	PUM2	97	84.701	Aotus_nancymaae
ENSCSEG00000020899	pum2	100	92.669	ENSACLG00000022532	pum2	100	92.751	Astatotilapia_calliptera
ENSCSEG00000020899	pum2	89	78.486	ENSBTAG00000011155	PUM2	97	84.479	Bos_taurus
ENSCSEG00000020899	pum2	89	77.689	ENSCJAG00000007450	PUM2	97	84.701	Callithrix_jacchus
ENSCSEG00000020899	pum2	90	75.254	ENSCAFG00000003839	PUM2	100	74.259	Canis_familiaris
ENSCSEG00000020899	pum2	88	78.088	ENSCAFG00020025689	PUM2	97	84.701	Canis_lupus_dingo
ENSCSEG00000020899	pum2	89	78.486	ENSCHIG00000022180	PUM2	97	84.922	Capra_hircus
ENSCSEG00000020899	pum2	89	77.645	ENSTSYG00000014463	PUM2	97	84.222	Carlito_syrichta
ENSCSEG00000020899	pum2	89	86.948	ENSCAPG00000016888	PUM2	99	84.989	Cavia_aperea
ENSCSEG00000020899	pum2	90	75.945	ENSCPOG00000031996	PUM2	97	84.257	Cavia_porcellus
ENSCSEG00000020899	pum2	89	77.689	ENSCCAG00000037035	PUM2	97	84.257	Cebus_capucinus
ENSCSEG00000020899	pum2	89	85.747	ENSCATG00000043826	PUM2	97	84.257	Cercocebus_atys
ENSCSEG00000020899	pum2	89	85.747	ENSCLAG00000006048	PUM2	97	84.701	Chinchilla_lanigera
ENSCSEG00000020899	pum2	89	77.689	ENSCSAG00000008087	PUM2	97	84.257	Chlorocebus_sabaeus
ENSCSEG00000020899	pum2	64	74.138	ENSCHOG00000004575	PUM2	79	74.138	Choloepus_hoffmanni
ENSCSEG00000020899	pum2	100	70.294	ENSCPBG00000019966	PUM2	100	72.878	Chrysemys_picta_bellii
ENSCSEG00000020899	pum2	89	77.689	ENSCANG00000032797	PUM2	97	84.257	Colobus_angolensis_palliatus
ENSCSEG00000020899	pum2	90	75.623	ENSCGRG00001025023	Pum2	97	84.257	Cricetulus_griseus_chok1gshd
ENSCSEG00000020899	pum2	90	75.808	ENSCGRG00000001580	Pum2	97	84.701	Cricetulus_griseus_crigri
ENSCSEG00000020899	pum2	100	91.838	ENSCVAG00000002426	pum2	100	91.591	Cyprinodon_variegatus
ENSCSEG00000020899	pum2	100	86.421	ENSDARG00000061040	pum2	100	85.415	Danio_rerio
ENSCSEG00000020899	pum2	90	72.686	ENSDNOG00000006733	PUM2	97	78.097	Dasypus_novemcinctus
ENSCSEG00000020899	pum2	82	85.747	ENSDORG00000011453	Pum2	100	84.257	Dipodomys_ordii
ENSCSEG00000020899	pum2	77	90.036	ENSETEG00000017683	PUM2	80	90.036	Echinops_telfairi
ENSCSEG00000020899	pum2	85	59.729	ENSEBUG00000004435	pum2	96	77.455	Eptatretus_burgeri
ENSCSEG00000020899	pum2	61	66.810	ENSEBUG00000014828	pum2	96	59.649	Eptatretus_burgeri
ENSCSEG00000020899	pum2	89	78.287	ENSEASG00005009429	PUM2	97	84.257	Equus_asinus_asinus
ENSCSEG00000020899	pum2	89	78.287	ENSECAG00000021930	PUM2	97	84.257	Equus_caballus
ENSCSEG00000020899	pum2	68	69.811	ENSEEUG00000003224	-	76	69.811	Erinaceus_europaeus
ENSCSEG00000020899	pum2	99	98.174	ENSELUG00000014997	pum2	100	98.174	Esox_lucius
ENSCSEG00000020899	pum2	90	75.162	ENSFCAG00000027520	PUM2	97	84.035	Felis_catus
ENSCSEG00000020899	pum2	85	85.143	ENSFALG00000001759	PUM2	97	84.035	Ficedula_albicollis
ENSCSEG00000020899	pum2	88	85.287	ENSFDAG00000019685	PUM2	97	83.814	Fukomys_damarensis
ENSCSEG00000020899	pum2	100	98.864	ENSFHEG00000021596	pum2	100	90.622	Fundulus_heteroclitus
ENSCSEG00000020899	pum2	90	86.469	ENSGMOG00000006903	pum2	100	86.469	Gadus_morhua
ENSCSEG00000020899	pum2	90	74.746	ENSGALG00000016481	PUM2	100	83.814	Gallus_gallus
ENSCSEG00000020899	pum2	100	92.745	ENSGAFG00000013691	pum2	100	92.580	Gambusia_affinis
ENSCSEG00000020899	pum2	90	90.392	ENSGACG00000009670	pum2	100	90.410	Gasterosteus_aculeatus
ENSCSEG00000020899	pum2	100	71.852	ENSGAGG00000020698	PUM2	98	83.814	Gopherus_agassizii
ENSCSEG00000020899	pum2	89	77.689	ENSGGOG00000011374	PUM2	97	84.257	Gorilla_gorilla
ENSCSEG00000020899	pum2	100	93.671	ENSHBUG00000016453	pum2	100	85.546	Haplochromis_burtoni
ENSCSEG00000020899	pum2	90	75.231	ENSHGLG00000007892	PUM2	97	83.370	Heterocephalus_glaber_female
ENSCSEG00000020899	pum2	90	75.254	ENSHGLG00100015510	PUM2	97	83.814	Heterocephalus_glaber_male
ENSCSEG00000020899	pum2	99	98.621	ENSHCOG00000010119	pum2	100	98.630	Hippocampus_comes
ENSCSEG00000020899	pum2	90	75.508	ENSSTOG00000006262	PUM2	97	84.257	Ictidomys_tridecemlineatus
ENSCSEG00000020899	pum2	90	75.923	ENSJJAG00000020969	Pum2	100	75.300	Jaculus_jaculus
ENSCSEG00000020899	pum2	100	91.351	ENSKMAG00000017216	pum2	100	91.928	Kryptolebias_marmoratus
ENSCSEG00000020899	pum2	100	93.394	ENSLBEG00000020488	pum2	100	93.311	Labrus_bergylta
ENSCSEG00000020899	pum2	100	73.792	ENSLACG00000008723	PUM2	100	73.633	Latimeria_chalumnae
ENSCSEG00000020899	pum2	99	93.103	ENSLOCG00000017196	pum2	100	91.353	Lepisosteus_oculatus
ENSCSEG00000020899	pum2	86	85.747	ENSLAFG00000009278	PUM2	97	84.257	Loxodonta_africana
ENSCSEG00000020899	pum2	89	77.689	ENSMFAG00000000492	PUM2	97	84.257	Macaca_fascicularis
ENSCSEG00000020899	pum2	89	85.747	ENSMMUG00000023181	PUM2	97	84.257	Macaca_mulatta
ENSCSEG00000020899	pum2	89	77.689	ENSMNEG00000039659	PUM2	97	84.257	Macaca_nemestrina
ENSCSEG00000020899	pum2	89	77.689	ENSMLEG00000039243	PUM2	97	84.257	Mandrillus_leucophaeus
ENSCSEG00000020899	pum2	100	92.574	ENSMAMG00000006121	pum2	100	92.574	Mastacembelus_armatus
ENSCSEG00000020899	pum2	100	92.669	ENSMZEG00005000791	pum2	100	92.751	Maylandia_zebra
ENSCSEG00000020899	pum2	90	74.746	ENSMGAG00000014040	PUM2	100	83.814	Meleagris_gallopavo
ENSCSEG00000020899	pum2	90	75.900	ENSMAUG00000000311	Pum2	97	84.701	Mesocricetus_auratus
ENSCSEG00000020899	pum2	90	75.993	ENSMICG00000011647	PUM2	97	84.257	Microcebus_murinus
ENSCSEG00000020899	pum2	90	75.786	ENSMOCG00000013663	Pum2	97	84.701	Microtus_ochrogaster
ENSCSEG00000020899	pum2	90	89.147	ENSMMOG00000002975	pum2	100	89.694	Mola_mola
ENSCSEG00000020899	pum2	90	72.635	ENSMODG00000009811	PUM2	97	81.596	Monodelphis_domestica
ENSCSEG00000020899	pum2	89	88.201	ENSMALG00000022313	pum2	100	87.807	Monopterus_albus
ENSCSEG00000020899	pum2	90	75.554	MGP_CAROLIEiJ_G0017603	Pum2	97	84.701	Mus_caroli
ENSCSEG00000020899	pum2	90	75.461	ENSMUSG00000020594	Pum2	97	84.479	Mus_musculus
ENSCSEG00000020899	pum2	90	76.015	MGP_PahariEiJ_G0029361	Pum2	97	84.257	Mus_pahari
ENSCSEG00000020899	pum2	90	75.554	MGP_SPRETEiJ_G0018447	Pum2	97	84.479	Mus_spretus
ENSCSEG00000020899	pum2	90	75.439	ENSMPUG00000013734	PUM2	100	74.444	Mustela_putorius_furo
ENSCSEG00000020899	pum2	89	77.888	ENSMLUG00000007362	PUM2	97	83.814	Myotis_lucifugus
ENSCSEG00000020899	pum2	90	76.063	ENSNGAG00000016665	-	100	75.000	Nannospalax_galili
ENSCSEG00000020899	pum2	90	49.316	ENSNGAG00000016239	-	99	52.226	Nannospalax_galili
ENSCSEG00000020899	pum2	89	81.478	ENSNBRG00000020737	pum2	100	79.552	Neolamprologus_brichardi
ENSCSEG00000020899	pum2	89	78.685	ENSNLEG00000002509	PUM2	97	84.701	Nomascus_leucogenys
ENSCSEG00000020899	pum2	84	71.073	ENSMEUG00000016567	PUM2	97	72.506	Notamacropus_eugenii
ENSCSEG00000020899	pum2	65	72.851	ENSOPRG00000001963	PUM2	89	70.886	Ochotona_princeps
ENSCSEG00000020899	pum2	90	75.461	ENSODEG00000007823	PUM2	97	84.922	Octodon_degus
ENSCSEG00000020899	pum2	100	92.689	ENSONIG00000006119	pum2	100	92.773	Oreochromis_niloticus
ENSCSEG00000020899	pum2	89	78.287	ENSOCUG00000017908	PUM2	97	84.257	Oryctolagus_cuniculus
ENSCSEG00000020899	pum2	100	89.851	ENSORLG00000012611	pum2	100	89.604	Oryzias_latipes
ENSCSEG00000020899	pum2	100	89.851	ENSORLG00020014452	pum2	100	89.604	Oryzias_latipes_hni
ENSCSEG00000020899	pum2	100	89.851	ENSORLG00015009427	pum2	100	89.604	Oryzias_latipes_hsok
ENSCSEG00000020899	pum2	84	86.562	ENSOMEG00000005889	pum2	100	86.458	Oryzias_melastigma
ENSCSEG00000020899	pum2	87	74.085	ENSOGAG00000002187	PUM2	100	73.882	Otolemur_garnettii
ENSCSEG00000020899	pum2	89	78.486	ENSOARG00000017236	PUM2	97	84.479	Ovis_aries
ENSCSEG00000020899	pum2	89	78.685	ENSPPAG00000023095	PUM2	97	84.257	Pan_paniscus
ENSCSEG00000020899	pum2	90	75.162	ENSPPRG00000021443	PUM2	97	84.035	Panthera_pardus
ENSCSEG00000020899	pum2	90	75.162	ENSPTIG00000018982	PUM2	97	84.035	Panthera_tigris_altaica
ENSCSEG00000020899	pum2	89	78.685	ENSPTRG00000011692	PUM2	97	84.257	Pan_troglodytes
ENSCSEG00000020899	pum2	90	66.059	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSCSEG00000020899	pum2	89	68.976	ENSPKIG00000023195	pum2	100	72.130	Paramormyrops_kingsleyae
ENSCSEG00000020899	pum2	97	85.287	ENSPSIG00000011626	PUM2	99	83.814	Pelodiscus_sinensis
ENSCSEG00000020899	pum2	89	87.745	ENSPMGG00000016123	pum2	100	87.353	Periophthalmus_magnuspinnatus
ENSCSEG00000020899	pum2	90	75.786	ENSPEMG00000008357	Pum2	100	74.977	Peromyscus_maniculatus_bairdii
ENSCSEG00000020899	pum2	90	78.182	ENSPMAG00000007038	pum2	100	60.362	Petromyzon_marinus
ENSCSEG00000020899	pum2	86	75.746	ENSPCIG00000022139	PUM2	97	81.596	Phascolarctos_cinereus
ENSCSEG00000020899	pum2	100	92.745	ENSPFOG00000019208	pum2	100	92.580	Poecilia_formosa
ENSCSEG00000020899	pum2	100	92.745	ENSPLAG00000001826	pum2	100	92.580	Poecilia_latipinna
ENSCSEG00000020899	pum2	100	92.828	ENSPMEG00000015766	pum2	100	93.619	Poecilia_mexicana
ENSCSEG00000020899	pum2	89	90.837	ENSPREG00000006905	pum2	100	90.542	Poecilia_reticulata
ENSCSEG00000020899	pum2	88	85.747	ENSPPYG00000012617	PUM2	97	84.257	Pongo_abelii
ENSCSEG00000020899	pum2	66	89.130	ENSPCAG00000008001	PUM2	70	89.130	Procavia_capensis
ENSCSEG00000020899	pum2	88	75.959	ENSPCOG00000019636	PUM2	100	75.117	Propithecus_coquereli
ENSCSEG00000020899	pum2	88	70.169	ENSPVAG00000002920	PUM2	100	69.144	Pteropus_vampyrus
ENSCSEG00000020899	pum2	100	92.586	ENSPNYG00000022901	pum2	100	92.669	Pundamilia_nyererei
ENSCSEG00000020899	pum2	98	87.660	ENSPNAG00000008025	pum2	99	87.319	Pygocentrus_nattereri
ENSCSEG00000020899	pum2	90	74.262	ENSRNOG00000006180	Pum2	97	85.227	Rattus_norvegicus
ENSCSEG00000020899	pum2	89	78.685	ENSRBIG00000044880	PUM2	97	84.701	Rhinopithecus_bieti
ENSCSEG00000020899	pum2	90	75.878	ENSSBOG00000022007	PUM2	97	84.701	Saimiri_boliviensis_boliviensis
ENSCSEG00000020899	pum2	86	75.149	ENSSHAG00000002778	PUM2	98	80.710	Sarcophilus_harrisii
ENSCSEG00000020899	pum2	91	77.075	ENSSFOG00015003476	pum2	100	84.922	Scleropages_formosus
ENSCSEG00000020899	pum2	100	92.593	ENSSMAG00000018236	pum2	100	93.004	Scophthalmus_maximus
ENSCSEG00000020899	pum2	97	89.286	ENSSDUG00000001800	pum2	100	89.286	Seriola_dumerili
ENSCSEG00000020899	pum2	100	93.899	ENSSLDG00000000981	pum2	100	94.477	Seriola_lalandi_dorsalis
ENSCSEG00000020899	pum2	78	83.710	ENSSARG00000010992	PUM2	83	81.013	Sorex_araneus
ENSCSEG00000020899	pum2	87	85.057	ENSSPUG00000017012	PUM2	97	83.592	Sphenodon_punctatus
ENSCSEG00000020899	pum2	100	92.993	ENSSPAG00000022948	pum2	100	93.157	Stegastes_partitus
ENSCSEG00000020899	pum2	85	85.845	ENSSSCG00000008600	PUM2	95	85.845	Sus_scrofa
ENSCSEG00000020899	pum2	89	77.291	ENSTGUG00000013149	PUM2	97	83.814	Taeniopygia_guttata
ENSCSEG00000020899	pum2	100	86.796	ENSTRUG00000018167	pum2	100	86.622	Takifugu_rubripes
ENSCSEG00000020899	pum2	100	89.540	ENSTNIG00000003116	pum2	100	89.289	Tetraodon_nigroviridis
ENSCSEG00000020899	pum2	70	88.066	ENSTBEG00000008729	PUM2	79	86.902	Tupaia_belangeri
ENSCSEG00000020899	pum2	89	77.689	ENSTTRG00000004887	PUM2	97	84.257	Tursiops_truncatus
ENSCSEG00000020899	pum2	64	79.355	ENSUAMG00000008120	PUM2	93	84.701	Ursus_americanus
ENSCSEG00000020899	pum2	90	75.439	ENSUMAG00000023198	PUM2	100	74.444	Ursus_maritimus
ENSCSEG00000020899	pum2	89	78.685	ENSVPAG00000005056	PUM2	100	73.981	Vicugna_pacos
ENSCSEG00000020899	pum2	90	75.346	ENSVVUG00000014829	PUM2	100	74.352	Vulpes_vulpes
ENSCSEG00000020899	pum2	100	67.102	ENSXETG00000008903	pum2	100	67.596	Xenopus_tropicalis
ENSCSEG00000020899	pum2	97	88.791	ENSXCOG00000002556	pum2	100	88.596	Xiphophorus_couchianus
ENSCSEG00000020899	pum2	100	92.663	ENSXMAG00000017682	pum2	100	92.498	Xiphophorus_maculatus