EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000020943 (Gene tree)
Gene ID: -
Gene Symbol: rbm38
Alias: fi25e12|rnpc1|wu:fi25e12|zgc:92336
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 5848 bases
Position: chr10:18891513-18897360
Accession: 103385422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000032637	RRM_1	PF00076.22	6.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033058	-	2450	XM_008319303	ENSCSEP00000032637	301 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000020943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000020943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000020943	rbm38	51	58.282	ENSCSEG00000004378	rbm24b	63	57.831
ENSCSEG00000020943	rbm38	61	64.324	ENSCSEG00000004701	-	80	62.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000020943	rbm38	60	61.957	ENSG00000132819	RBM38	93	77.193	Homo_sapiens
ENSCSEG00000020943	rbm38	63	65.104	ENSAPOG00000009939	-	85	63.351	Acanthochromis_polyacanthus
ENSCSEG00000020943	rbm38	68	69.856	ENSAPOG00000003301	rbm38	84	69.856	Acanthochromis_polyacanthus
ENSCSEG00000020943	rbm38	68	68.421	ENSACIG00000000010	rbm38	83	68.421	Amphilophus_citrinellus
ENSCSEG00000020943	rbm38	63	64.583	ENSACIG00000012502	-	100	75.214	Amphilophus_citrinellus
ENSCSEG00000020943	rbm38	64	64.286	ENSAOCG00000012559	RBM38	84	62.564	Amphiprion_ocellaris
ENSCSEG00000020943	rbm38	68	69.856	ENSAOCG00000013497	-	84	69.856	Amphiprion_ocellaris
ENSCSEG00000020943	rbm38	68	69.856	ENSAPEG00000013137	rbm38	84	71.649	Amphiprion_percula
ENSCSEG00000020943	rbm38	60	67.403	ENSAPEG00000023581	-	80	61.307	Amphiprion_percula
ENSCSEG00000020943	rbm38	60	66.298	ENSATEG00000016710	-	77	61.780	Anabas_testudineus
ENSCSEG00000020943	rbm38	71	65.022	ENSATEG00000016366	rbm38	89	65.315	Anabas_testudineus
ENSCSEG00000020943	rbm38	59	59.890	ENSACAG00000016238	RBM38	60	66.667	Anolis_carolinensis
ENSCSEG00000020943	rbm38	60	61.957	ENSANAG00000031959	RBM38	79	82.292	Aotus_nancymaae
ENSCSEG00000020943	rbm38	63	64.062	ENSACLG00000019514	-	82	59.804	Astatotilapia_calliptera
ENSCSEG00000020943	rbm38	58	62.069	ENSAMXG00000038120	rbm38	67	64.151	Astyanax_mexicanus
ENSCSEG00000020943	rbm38	63	63.731	ENSAMXG00000015601	-	81	63.731	Astyanax_mexicanus
ENSCSEG00000020943	rbm38	60	60.870	ENSBTAG00000008105	RBM38	62	67.333	Bos_taurus
ENSCSEG00000020943	rbm38	53	50.299	WBGene00006321	sup-12	81	61.240	Caenorhabditis_elegans
ENSCSEG00000020943	rbm38	60	61.413	ENSCJAG00000019139	RBM38	79	82.292	Callithrix_jacchus
ENSCSEG00000020943	rbm38	60	60.870	ENSCAFG00020021943	RBM38	76	60.870	Canis_lupus_dingo
ENSCSEG00000020943	rbm38	65	56.500	ENSCHIG00000002609	RBM38	69	61.905	Capra_hircus
ENSCSEG00000020943	rbm38	60	61.413	ENSCPOG00000012781	RBM38	62	68.667	Cavia_porcellus
ENSCSEG00000020943	rbm38	60	61.413	ENSCCAG00000036872	RBM38	79	82.292	Cebus_capucinus
ENSCSEG00000020943	rbm38	60	61.957	ENSCATG00000032133	RBM38	79	82.292	Cercocebus_atys
ENSCSEG00000020943	rbm38	60	61.413	ENSCLAG00000005906	RBM38	64	68.667	Chinchilla_lanigera
ENSCSEG00000020943	rbm38	60	61.957	ENSCSAG00000015503	RBM38	62	68.667	Chlorocebus_sabaeus
ENSCSEG00000020943	rbm38	64	57.949	ENSCPBG00000024059	RBM38	71	64.516	Chrysemys_picta_bellii
ENSCSEG00000020943	rbm38	60	48.066	ENSCANG00000030105	-	65	48.066	Colobus_angolensis_palliatus
ENSCSEG00000020943	rbm38	60	61.957	ENSCGRG00001012928	Rbm38	62	68.667	Cricetulus_griseus_chok1gshd
ENSCSEG00000020943	rbm38	63	68.421	ENSCVAG00000015952	rbm38	84	65.550	Cyprinodon_variegatus
ENSCSEG00000020943	rbm38	61	64.674	ENSCVAG00000005472	-	77	61.053	Cyprinodon_variegatus
ENSCSEG00000020943	rbm38	65	64.615	ENSDARG00000058818	rbm38	81	64.615	Danio_rerio
ENSCSEG00000020943	rbm38	60	59.783	ENSDNOG00000032004	RBM38	71	66.000	Dasypus_novemcinctus
ENSCSEG00000020943	rbm38	60	59.783	ENSECAG00000007700	RBM38	62	66.000	Equus_caballus
ENSCSEG00000020943	rbm38	55	63.905	ENSEEUG00000013489	RBM38	62	67.333	Erinaceus_europaeus
ENSCSEG00000020943	rbm38	63	65.445	ENSELUG00000000585	-	83	65.445	Esox_lucius
ENSCSEG00000020943	rbm38	63	63.776	ENSELUG00000005849	-	79	63.776	Esox_lucius
ENSCSEG00000020943	rbm38	60	60.326	ENSFCAG00000042916	RBM38	79	81.250	Felis_catus
ENSCSEG00000020943	rbm38	56	62.941	ENSFALG00000010805	RBM38	76	67.785	Ficedula_albicollis
ENSCSEG00000020943	rbm38	73	63.393	ENSFHEG00000017748	rbm38	84	65.714	Fundulus_heteroclitus
ENSCSEG00000020943	rbm38	67	59.606	ENSFHEG00000006160	-	89	57.921	Fundulus_heteroclitus
ENSCSEG00000020943	rbm38	62	64.021	ENSGMOG00000016655	-	82	73.377	Gadus_morhua
ENSCSEG00000020943	rbm38	62	59.474	ENSGALG00000026081	RBM38	71	64.516	Gallus_gallus
ENSCSEG00000020943	rbm38	61	70.652	ENSGACG00000015224	rbm38	87	70.109	Gasterosteus_aculeatus
ENSCSEG00000020943	rbm38	60	65.934	ENSGACG00000009873	-	83	62.431	Gasterosteus_aculeatus
ENSCSEG00000020943	rbm38	64	57.949	ENSGAGG00000001187	RBM38	71	65.161	Gopherus_agassizii
ENSCSEG00000020943	rbm38	63	64.062	ENSHBUG00000011778	-	81	62.632	Haplochromis_burtoni
ENSCSEG00000020943	rbm38	68	67.464	ENSHBUG00000012058	rbm38	84	67.464	Haplochromis_burtoni
ENSCSEG00000020943	rbm38	55	66.061	ENSHGLG00000015077	RBM38	62	68.667	Heterocephalus_glaber_female
ENSCSEG00000020943	rbm38	73	59.193	ENSHCOG00000019040	rbm38	74	62.051	Hippocampus_comes
ENSCSEG00000020943	rbm38	63	61.979	ENSHCOG00000005622	-	54	59.686	Hippocampus_comes
ENSCSEG00000020943	rbm38	63	62.827	ENSIPUG00000019349	-	70	66.667	Ictalurus_punctatus
ENSCSEG00000020943	rbm38	68	58.986	ENSKMAG00000012402	rbm38	93	59.259	Kryptolebias_marmoratus
ENSCSEG00000020943	rbm38	61	65.946	ENSLBEG00000016163	RBM38	78	64.130	Labrus_bergylta
ENSCSEG00000020943	rbm38	68	70.335	ENSLBEG00000018878	rbm38	84	70.335	Labrus_bergylta
ENSCSEG00000020943	rbm38	70	58.371	ENSLOCG00000003456	rbm38	93	58.824	Lepisosteus_oculatus
ENSCSEG00000020943	rbm38	60	61.957	ENSMFAG00000043808	RBM38	79	82.292	Macaca_fascicularis
ENSCSEG00000020943	rbm38	60	61.957	ENSMMUG00000031391	RBM38	79	82.292	Macaca_mulatta
ENSCSEG00000020943	rbm38	60	61.957	ENSMNEG00000034683	RBM38	79	82.292	Macaca_nemestrina
ENSCSEG00000020943	rbm38	68	69.378	ENSMAMG00000024135	rbm38	84	69.378	Mastacembelus_armatus
ENSCSEG00000020943	rbm38	60	66.851	ENSMAMG00000020499	RBM38	81	60.804	Mastacembelus_armatus
ENSCSEG00000020943	rbm38	68	67.464	ENSMZEG00005026036	rbm38	84	67.464	Maylandia_zebra
ENSCSEG00000020943	rbm38	63	64.062	ENSMZEG00005000849	-	81	62.632	Maylandia_zebra
ENSCSEG00000020943	rbm38	60	61.957	ENSMAUG00000021211	Rbm38	62	69.333	Mesocricetus_auratus
ENSCSEG00000020943	rbm38	60	60.870	ENSMICG00000038011	RBM38	69	68.000	Microcebus_murinus
ENSCSEG00000020943	rbm38	60	61.957	ENSMOCG00000008715	Rbm38	62	69.333	Microtus_ochrogaster
ENSCSEG00000020943	rbm38	63	63.731	ENSMMOG00000020051	-	84	61.979	Mola_mola
ENSCSEG00000020943	rbm38	60	60.656	ENSMODG00000016458	RBM38	65	65.806	Monodelphis_domestica
ENSCSEG00000020943	rbm38	59	66.667	ENSMALG00000004680	RBM38	80	59.155	Monopterus_albus
ENSCSEG00000020943	rbm38	52	72.956	ENSMALG00000022327	rbm38	68	72.956	Monopterus_albus
ENSCSEG00000020943	rbm38	56	64.881	MGP_CAROLIEiJ_G0024745	Rbm38	83	63.077	Mus_caroli
ENSCSEG00000020943	rbm38	56	64.881	ENSMUSG00000027510	Rbm38	83	63.077	Mus_musculus
ENSCSEG00000020943	rbm38	50	69.333	MGP_PahariEiJ_G0026186	Rbm38	60	76.596	Mus_pahari
ENSCSEG00000020943	rbm38	56	64.881	MGP_SPRETEiJ_G0025665	Rbm38	83	63.077	Mus_spretus
ENSCSEG00000020943	rbm38	60	60.326	ENSMPUG00000006518	RBM38	73	67.333	Mustela_putorius_furo
ENSCSEG00000020943	rbm38	60	60.326	ENSMLUG00000011140	RBM38	69	66.667	Myotis_lucifugus
ENSCSEG00000020943	rbm38	68	66.986	ENSNBRG00000022685	rbm38	84	66.986	Neolamprologus_brichardi
ENSCSEG00000020943	rbm38	63	64.062	ENSNBRG00000022545	-	82	59.804	Neolamprologus_brichardi
ENSCSEG00000020943	rbm38	60	61.957	ENSODEG00000007980	RBM38	62	68.667	Octodon_degus
ENSCSEG00000020943	rbm38	68	67.464	ENSONIG00000017073	rbm38	85	67.464	Oreochromis_niloticus
ENSCSEG00000020943	rbm38	63	64.062	ENSONIG00000020324	-	83	59.804	Oreochromis_niloticus
ENSCSEG00000020943	rbm38	64	56.923	ENSOANG00000009259	RBM38	58	63.399	Ornithorhynchus_anatinus
ENSCSEG00000020943	rbm38	62	65.241	ENSORLG00000012154	rbm38	81	63.547	Oryzias_latipes
ENSCSEG00000020943	rbm38	59	65.556	ENSORLG00000027180	-	81	58.128	Oryzias_latipes
ENSCSEG00000020943	rbm38	69	59.524	ENSORLG00020020751	-	84	56.164	Oryzias_latipes_hni
ENSCSEG00000020943	rbm38	66	64.039	ENSORLG00020017871	rbm38	81	64.039	Oryzias_latipes_hni
ENSCSEG00000020943	rbm38	66	64.039	ENSORLG00015012606	rbm38	87	63.235	Oryzias_latipes_hsok
ENSCSEG00000020943	rbm38	60	65.193	ENSORLG00015017040	-	84	58.173	Oryzias_latipes_hsok
ENSCSEG00000020943	rbm38	66	64.532	ENSOMEG00000006805	rbm38	81	64.532	Oryzias_melastigma
ENSCSEG00000020943	rbm38	60	65.193	ENSOMEG00000023912	-	77	60.733	Oryzias_melastigma
ENSCSEG00000020943	rbm38	60	61.413	ENSOGAG00000029136	RBM38	62	68.000	Otolemur_garnettii
ENSCSEG00000020943	rbm38	60	60.326	ENSPPRG00000009507	RBM38	79	81.250	Panthera_pardus
ENSCSEG00000020943	rbm38	67	58.738	ENSPTRG00000013661	RBM38	79	82.292	Pan_troglodytes
ENSCSEG00000020943	rbm38	60	61.957	ENSPANG00000020919	-	79	82.292	Papio_anubis
ENSCSEG00000020943	rbm38	60	51.351	ENSPANG00000033127	-	61	55.629	Papio_anubis
ENSCSEG00000020943	rbm38	61	61.376	ENSPKIG00000025417	rbm38	86	58.216	Paramormyrops_kingsleyae
ENSCSEG00000020943	rbm38	63	61.979	ENSPKIG00000018122	-	95	77.477	Paramormyrops_kingsleyae
ENSCSEG00000020943	rbm38	64	57.436	ENSPSIG00000011649	RBM38	65	64.516	Pelodiscus_sinensis
ENSCSEG00000020943	rbm38	63	67.368	ENSPMGG00000011343	rbm38	77	64.737	Periophthalmus_magnuspinnatus
ENSCSEG00000020943	rbm38	60	62.088	ENSPMGG00000017094	-	74	61.622	Periophthalmus_magnuspinnatus
ENSCSEG00000020943	rbm38	64	57.949	ENSPCIG00000013648	RBM38	65	65.806	Phascolarctos_cinereus
ENSCSEG00000020943	rbm38	63	68.041	ENSPFOG00000011658	rbm38	84	65.258	Poecilia_formosa
ENSCSEG00000020943	rbm38	63	68.041	ENSPLAG00000005218	rbm38	84	65.258	Poecilia_latipinna
ENSCSEG00000020943	rbm38	63	63.351	ENSPLAG00000002500	-	77	61.257	Poecilia_latipinna
ENSCSEG00000020943	rbm38	62	67.708	ENSPMEG00000015770	rbm38	84	64.789	Poecilia_mexicana
ENSCSEG00000020943	rbm38	63	68.041	ENSPREG00000007398	rbm38	84	65.258	Poecilia_reticulata
ENSCSEG00000020943	rbm38	60	60.870	ENSPCOG00000026201	RBM38	79	82.292	Propithecus_coquereli
ENSCSEG00000020943	rbm38	68	66.986	ENSPNYG00000021373	rbm38	84	66.986	Pundamilia_nyererei
ENSCSEG00000020943	rbm38	63	64.062	ENSPNYG00000019727	-	100	75.214	Pundamilia_nyererei
ENSCSEG00000020943	rbm38	65	63.131	ENSPNAG00000015123	-	88	76.106	Pygocentrus_nattereri
ENSCSEG00000020943	rbm38	75	58.696	ENSPNAG00000010596	rbm38	71	68.639	Pygocentrus_nattereri
ENSCSEG00000020943	rbm38	64	60.204	ENSRNOG00000006420	Rbm38	70	64.286	Rattus_norvegicus
ENSCSEG00000020943	rbm38	60	53.039	ENSRROG00000036388	-	74	53.039	Rhinopithecus_roxellana
ENSCSEG00000020943	rbm38	60	61.413	ENSSBOG00000031053	RBM38	90	82.292	Saimiri_boliviensis_boliviensis
ENSCSEG00000020943	rbm38	63	60.938	ENSSFOG00015004453	rbm38	80	60.733	Scleropages_formosus
ENSCSEG00000020943	rbm38	68	68.900	ENSSDUG00000022611	rbm38	84	68.900	Seriola_dumerili
ENSCSEG00000020943	rbm38	60	66.851	ENSSDUG00000021082	RBM38	80	61.111	Seriola_dumerili
ENSCSEG00000020943	rbm38	60	66.298	ENSSLDG00000011778	RBM38	78	61.780	Seriola_lalandi_dorsalis
ENSCSEG00000020943	rbm38	68	68.900	ENSSLDG00000010845	rbm38	90	68.780	Seriola_lalandi_dorsalis
ENSCSEG00000020943	rbm38	60	67.403	ENSSPAG00000020989	RBM38	85	62.827	Stegastes_partitus
ENSCSEG00000020943	rbm38	68	69.856	ENSSPAG00000011113	rbm38	84	69.856	Stegastes_partitus
ENSCSEG00000020943	rbm38	60	60.870	ENSSSCG00000007504	RBM38	62	67.333	Sus_scrofa
ENSCSEG00000020943	rbm38	62	63.684	ENSTRUG00000019869	-	69	66.272	Takifugu_rubripes
ENSCSEG00000020943	rbm38	62	71.658	ENSTRUG00000024954	rbm38	87	67.290	Takifugu_rubripes
ENSCSEG00000020943	rbm38	63	64.249	ENSTNIG00000007093	-	72	68.944	Tetraodon_nigroviridis
ENSCSEG00000020943	rbm38	60	60.326	ENSUAMG00000019780	RBM38	62	67.333	Ursus_americanus
ENSCSEG00000020943	rbm38	60	60.870	ENSVVUG00000017246	RBM38	76	60.870	Vulpes_vulpes
ENSCSEG00000020943	rbm38	60	61.749	ENSXETG00000011268	rbm38	68	66.452	Xenopus_tropicalis
ENSCSEG00000020943	rbm38	55	56.667	ENSXCOG00000017324	-	60	67.669	Xiphophorus_couchianus
ENSCSEG00000020943	rbm38	63	69.474	ENSXMAG00000023662	rbm38	84	66.507	Xiphophorus_maculatus