EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000021092 (Gene tree)
Gene ID: 103392582
Gene Symbol: raver1
Alias: zgc:112236
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 19362 bases
Position: chr17:1279453-1298814
Accession: 103392582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000032857	RRM_1	PF00076.22	2.2e-28	1	2
ENSCSEP00000032857	RRM_1	PF00076.22	2.2e-28	2	2
ENSCSEP00000032853	RRM_1	PF00076.22	2.9e-28	1	2
ENSCSEP00000032853	RRM_1	PF00076.22	2.9e-28	2	2
ENSCSEP00000032854	RRM_1	PF00076.22	2.9e-28	1	2
ENSCSEP00000032854	RRM_1	PF00076.22	2.9e-28	2	2
ENSCSEP00000032855	RRM_1	PF00076.22	2.9e-28	1	2
ENSCSEP00000032855	RRM_1	PF00076.22	2.9e-28	2	2
ENSCSEP00000032856	RRM_1	PF00076.22	2.9e-28	1	2
ENSCSEP00000032856	RRM_1	PF00076.22	2.9e-28	2	2
ENSCSEP00000032858	RRM_1	PF00076.22	3e-28	1	2
ENSCSEP00000032858	RRM_1	PF00076.22	3e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033278	-	3826	-	ENSCSEP00000032854	727 (aa)	XP_024920337	UPI000496A19A
ENSCSET00000033279	-	3826	-	ENSCSEP00000032855	727 (aa)	XP_024920337	UPI000496A19A
ENSCSET00000033277	-	6238	XM_017040198	ENSCSEP00000032853	727 (aa)	XP_024920337	UPI000496A19A
ENSCSET00000033281	-	3691	-	ENSCSEP00000032857	682 (aa)	-	-
ENSCSET00000033280	-	3826	-	ENSCSEP00000032856	727 (aa)	XP_024920337	UPI000496A19A
ENSCSET00000033282	-	2379	-	ENSCSEP00000032858	739 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000021092's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021092's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021092	raver1	78	78.846	ENSG00000161847	RAVER1	97	48.594	Homo_sapiens
ENSCSEG00000021092	raver1	98	76.657	ENSAPOG00000017267	raver1	90	76.657	Acanthochromis_polyacanthus
ENSCSEG00000021092	raver1	79	78.846	ENSAMEG00000011738	RAVER1	73	78.846	Ailuropoda_melanoleuca
ENSCSEG00000021092	raver1	98	77.732	ENSAOCG00000005128	raver1	95	77.732	Amphiprion_ocellaris
ENSCSEG00000021092	raver1	98	77.747	ENSAPEG00000010854	raver1	98	77.747	Amphiprion_percula
ENSCSEG00000021092	raver1	98	76.511	ENSATEG00000021004	raver1	98	76.511	Anabas_testudineus
ENSCSEG00000021092	raver1	78	50.000	ENSACAG00000008386	-	91	49.442	Anolis_carolinensis
ENSCSEG00000021092	raver1	79	78.846	ENSANAG00000028226	RAVER1	73	78.846	Aotus_nancymaae
ENSCSEG00000021092	raver1	100	76.113	ENSACLG00000018492	raver1	94	76.406	Astatotilapia_calliptera
ENSCSEG00000021092	raver1	94	65.726	ENSAMXG00000005132	raver1	96	65.021	Astyanax_mexicanus
ENSCSEG00000021092	raver1	86	78.846	ENSBTAG00000015721	RAVER1	85	66.022	Bos_taurus
ENSCSEG00000021092	raver1	78	78.846	ENSCJAG00000005671	RAVER1	95	48.473	Callithrix_jacchus
ENSCSEG00000021092	raver1	87	78.846	ENSCAFG00000017861	RAVER1	83	78.846	Canis_familiaris
ENSCSEG00000021092	raver1	87	78.846	ENSCAFG00020024449	RAVER1	85	78.846	Canis_lupus_dingo
ENSCSEG00000021092	raver1	79	73.214	ENSCHIG00000006718	RAVER1	97	48.919	Capra_hircus
ENSCSEG00000021092	raver1	59	78.846	ENSTSYG00000027107	RAVER1	100	50.000	Carlito_syrichta
ENSCSEG00000021092	raver1	70	78.846	ENSCAPG00000002269	RAVER1	73	78.846	Cavia_aperea
ENSCSEG00000021092	raver1	75	78.846	ENSCPOG00000001008	RAVER1	99	48.635	Cavia_porcellus
ENSCSEG00000021092	raver1	78	83.333	ENSCCAG00000031723	RAVER1	73	83.333	Cebus_capucinus
ENSCSEG00000021092	raver1	78	83.333	ENSCATG00000043863	RAVER1	95	48.529	Cercocebus_atys
ENSCSEG00000021092	raver1	76	78.846	ENSCLAG00000009336	RAVER1	74	78.846	Chinchilla_lanigera
ENSCSEG00000021092	raver1	76	78.846	ENSCSAG00000007317	RAVER1	60	78.846	Chlorocebus_sabaeus
ENSCSEG00000021092	raver1	94	49.482	ENSCPBG00000005349	-	99	48.438	Chrysemys_picta_bellii
ENSCSEG00000021092	raver1	75	83.333	ENSCANG00000008337	RAVER1	72	78.846	Colobus_angolensis_palliatus
ENSCSEG00000021092	raver1	76	80.769	ENSCGRG00001013260	-	98	49.262	Cricetulus_griseus_chok1gshd
ENSCSEG00000021092	raver1	76	80.769	ENSCGRG00000015138	-	98	49.262	Cricetulus_griseus_crigri
ENSCSEG00000021092	raver1	100	72.739	ENSCVAG00000013971	raver1	98	73.072	Cyprinodon_variegatus
ENSCSEG00000021092	raver1	98	63.798	ENSDARG00000052617	raver1	98	63.151	Danio_rerio
ENSCSEG00000021092	raver1	54	80.769	ENSDNOG00000035742	-	51	80.769	Dasypus_novemcinctus
ENSCSEG00000021092	raver1	63	80.392	ENSDORG00000010106	-	74	80.392	Dipodomys_ordii
ENSCSEG00000021092	raver1	57	64.721	ENSEASG00005010544	-	66	65.847	Equus_asinus_asinus
ENSCSEG00000021092	raver1	79	78.846	ENSECAG00000024966	RAVER1	73	78.846	Equus_caballus
ENSCSEG00000021092	raver1	98	67.950	ENSELUG00000023287	raver1	98	66.621	Esox_lucius
ENSCSEG00000021092	raver1	64	78.846	ENSFCAG00000009435	RAVER1	70	78.846	Felis_catus
ENSCSEG00000021092	raver1	75	78.846	ENSFDAG00000015113	RAVER1	75	78.846	Fukomys_damarensis
ENSCSEG00000021092	raver1	93	66.996	ENSGMOG00000003649	raver1	99	67.701	Gadus_morhua
ENSCSEG00000021092	raver1	68	40.249	ENSGALG00000050608	-	53	38.812	Gallus_gallus
ENSCSEG00000021092	raver1	100	72.162	ENSGAFG00000015944	raver1	98	72.490	Gambusia_affinis
ENSCSEG00000021092	raver1	94	67.024	ENSGACG00000013818	raver1	99	68.027	Gasterosteus_aculeatus
ENSCSEG00000021092	raver1	81	67.473	ENSGAGG00000011748	-	96	67.473	Gopherus_agassizii
ENSCSEG00000021092	raver1	78	78.846	ENSGGOG00000006015	RAVER1	95	48.594	Gorilla_gorilla
ENSCSEG00000021092	raver1	99	75.951	ENSHBUG00000021210	raver1	93	76.243	Haplochromis_burtoni
ENSCSEG00000021092	raver1	75	78.846	ENSHGLG00000015460	RAVER1	74	78.846	Heterocephalus_glaber_female
ENSCSEG00000021092	raver1	75	78.846	ENSHGLG00100000812	RAVER1	74	78.846	Heterocephalus_glaber_male
ENSCSEG00000021092	raver1	100	71.603	ENSHCOG00000000449	raver1	96	73.066	Hippocampus_comes
ENSCSEG00000021092	raver1	99	63.612	ENSIPUG00000013153	raver1	98	64.795	Ictalurus_punctatus
ENSCSEG00000021092	raver1	79	78.846	ENSSTOG00000003241	RAVER1	99	48.999	Ictidomys_tridecemlineatus
ENSCSEG00000021092	raver1	76	80.769	ENSJJAG00000018219	-	72	80.769	Jaculus_jaculus
ENSCSEG00000021092	raver1	100	73.919	ENSKMAG00000017355	raver1	98	74.176	Kryptolebias_marmoratus
ENSCSEG00000021092	raver1	92	75.549	ENSLBEG00000008268	raver1	94	75.708	Labrus_bergylta
ENSCSEG00000021092	raver1	69	84.615	ENSLACG00000005809	-	75	84.615	Latimeria_chalumnae
ENSCSEG00000021092	raver1	92	59.918	ENSLOCG00000007500	raver1	98	58.301	Lepisosteus_oculatus
ENSCSEG00000021092	raver1	78	78.846	ENSLAFG00000003664	-	89	78.846	Loxodonta_africana
ENSCSEG00000021092	raver1	76	78.846	ENSMFAG00000037977	RAVER1	94	49.180	Macaca_fascicularis
ENSCSEG00000021092	raver1	76	78.846	ENSMMUG00000014897	RAVER1	94	48.907	Macaca_mulatta
ENSCSEG00000021092	raver1	75	83.333	ENSMNEG00000028390	RAVER1	94	48.907	Macaca_nemestrina
ENSCSEG00000021092	raver1	78	83.333	ENSMLEG00000041959	RAVER1	95	48.663	Mandrillus_leucophaeus
ENSCSEG00000021092	raver1	98	75.824	ENSMAMG00000012059	raver1	98	75.824	Mastacembelus_armatus
ENSCSEG00000021092	raver1	100	76.113	ENSMZEG00005019002	raver1	98	76.406	Maylandia_zebra
ENSCSEG00000021092	raver1	76	80.769	ENSMAUG00000017948	-	74	80.769	Mesocricetus_auratus
ENSCSEG00000021092	raver1	78	78.431	ENSMICG00000010326	RAVER1	85	78.431	Microcebus_murinus
ENSCSEG00000021092	raver1	76	80.769	ENSMOCG00000015553	-	74	80.769	Microtus_ochrogaster
ENSCSEG00000021092	raver1	98	75.862	ENSMMOG00000012093	raver1	98	75.862	Mola_mola
ENSCSEG00000021092	raver1	87	49.700	ENSMODG00000005584	-	85	49.700	Monodelphis_domestica
ENSCSEG00000021092	raver1	100	73.016	ENSMALG00000016569	raver1	98	74.074	Monopterus_albus
ENSCSEG00000021092	raver1	76	80.769	MGP_CAROLIEiJ_G0031860	-	72	80.769	Mus_caroli
ENSCSEG00000021092	raver1	76	80.769	ENSMUSG00000010205	Raver1	72	80.769	Mus_musculus
ENSCSEG00000021092	raver1	76	80.769	MGP_PahariEiJ_G0014726	-	72	80.769	Mus_pahari
ENSCSEG00000021092	raver1	76	80.769	MGP_SPRETEiJ_G0032984	-	72	80.769	Mus_spretus
ENSCSEG00000021092	raver1	75	78.846	ENSMPUG00000006712	RAVER1	70	78.846	Mustela_putorius_furo
ENSCSEG00000021092	raver1	87	78.846	ENSMLUG00000012328	RAVER1	99	49.254	Myotis_lucifugus
ENSCSEG00000021092	raver1	76	78.846	ENSNGAG00000001260	-	74	78.846	Nannospalax_galili
ENSCSEG00000021092	raver1	100	68.016	ENSNBRG00000010139	raver1	98	67.490	Neolamprologus_brichardi
ENSCSEG00000021092	raver1	78	78.846	ENSNLEG00000012181	RAVER1	95	48.594	Nomascus_leucogenys
ENSCSEG00000021092	raver1	69	86.792	ENSMEUG00000003281	-	100	49.552	Notamacropus_eugenii
ENSCSEG00000021092	raver1	75	78.846	ENSODEG00000016260	RAVER1	74	78.846	Octodon_degus
ENSCSEG00000021092	raver1	92	75.837	ENSONIG00000001559	raver1	100	75.837	Oreochromis_niloticus
ENSCSEG00000021092	raver1	79	78.846	ENSOCUG00000020918	RAVER1	75	78.846	Oryctolagus_cuniculus
ENSCSEG00000021092	raver1	100	72.432	ENSORLG00000005458	raver1	98	72.665	Oryzias_latipes
ENSCSEG00000021092	raver1	100	72.838	ENSORLG00020004392	raver1	98	73.077	Oryzias_latipes_hni
ENSCSEG00000021092	raver1	100	72.703	ENSORLG00015017222	raver1	98	72.940	Oryzias_latipes_hsok
ENSCSEG00000021092	raver1	100	72.374	ENSOMEG00000023956	raver1	98	72.474	Oryzias_melastigma
ENSCSEG00000021092	raver1	79	78.846	ENSOGAG00000011071	RAVER1	73	78.846	Otolemur_garnettii
ENSCSEG00000021092	raver1	78	78.846	ENSOARG00000015886	RAVER1	73	78.846	Ovis_aries
ENSCSEG00000021092	raver1	78	78.846	ENSPPAG00000002611	RAVER1	95	48.594	Pan_paniscus
ENSCSEG00000021092	raver1	76	78.846	ENSPPRG00000009912	RAVER1	70	78.846	Panthera_pardus
ENSCSEG00000021092	raver1	78	78.846	ENSPTRG00000010466	RAVER1	95	48.594	Pan_troglodytes
ENSCSEG00000021092	raver1	78	83.333	ENSPANG00000004122	RAVER1	95	48.465	Papio_anubis
ENSCSEG00000021092	raver1	76	82.692	ENSPEMG00000016411	-	74	82.692	Peromyscus_maniculatus_bairdii
ENSCSEG00000021092	raver1	79	86.792	ENSPCIG00000018695	-	77	86.792	Phascolarctos_cinereus
ENSCSEG00000021092	raver1	100	73.404	ENSPFOG00000007016	raver1	98	73.478	Poecilia_formosa
ENSCSEG00000021092	raver1	100	67.414	ENSPLAG00000020793	raver1	96	72.247	Poecilia_latipinna
ENSCSEG00000021092	raver1	100	73.009	ENSPMEG00000011220	raver1	98	73.352	Poecilia_mexicana
ENSCSEG00000021092	raver1	100	71.490	ENSPREG00000006864	raver1	98	71.825	Poecilia_reticulata
ENSCSEG00000021092	raver1	78	78.846	ENSPPYG00000010514	RAVER1	81	48.456	Pongo_abelii
ENSCSEG00000021092	raver1	78	78.846	ENSPCOG00000026605	RAVER1	71	78.846	Propithecus_coquereli
ENSCSEG00000021092	raver1	75	78.846	ENSPVAG00000003689	RAVER1	75	78.846	Pteropus_vampyrus
ENSCSEG00000021092	raver1	100	71.622	ENSPNYG00000013284	raver1	98	71.329	Pundamilia_nyererei
ENSCSEG00000021092	raver1	98	66.125	ENSPNAG00000015476	raver1	98	65.447	Pygocentrus_nattereri
ENSCSEG00000021092	raver1	76	80.769	ENSRNOG00000020710	Raver1	96	48.916	Rattus_norvegicus
ENSCSEG00000021092	raver1	78	83.333	ENSRBIG00000034702	RAVER1	72	78.846	Rhinopithecus_bieti
ENSCSEG00000021092	raver1	78	83.333	ENSRROG00000031186	RAVER1	95	49.111	Rhinopithecus_roxellana
ENSCSEG00000021092	raver1	79	78.846	ENSSBOG00000023423	RAVER1	96	48.847	Saimiri_boliviensis_boliviensis
ENSCSEG00000021092	raver1	85	50.980	ENSSHAG00000008181	-	90	50.932	Sarcophilus_harrisii
ENSCSEG00000021092	raver1	98	77.193	ENSSMAG00000004546	raver1	98	77.328	Scophthalmus_maximus
ENSCSEG00000021092	raver1	98	79.808	ENSSDUG00000021063	raver1	98	79.808	Seriola_dumerili
ENSCSEG00000021092	raver1	98	79.670	ENSSLDG00000014505	raver1	98	79.670	Seriola_lalandi_dorsalis
ENSCSEG00000021092	raver1	98	77.060	ENSSPAG00000000688	raver1	98	77.060	Stegastes_partitus
ENSCSEG00000021092	raver1	76	78.846	ENSSSCG00000013650	-	77	78.846	Sus_scrofa
ENSCSEG00000021092	raver1	98	72.828	ENSTRUG00000025641	raver1	98	72.828	Takifugu_rubripes
ENSCSEG00000021092	raver1	76	78.846	ENSTTRG00000009552	RAVER1	74	78.846	Tursiops_truncatus
ENSCSEG00000021092	raver1	79	78.846	ENSUAMG00000020385	RAVER1	73	78.846	Ursus_americanus
ENSCSEG00000021092	raver1	87	78.846	ENSVVUG00000028976	RAVER1	83	78.846	Vulpes_vulpes
ENSCSEG00000021092	raver1	95	49.795	ENSXETG00000011622	raver1	99	48.204	Xenopus_tropicalis
ENSCSEG00000021092	raver1	100	73.414	ENSXCOG00000016368	raver1	98	73.764	Xiphophorus_couchianus
ENSCSEG00000021092	raver1	100	73.378	ENSXMAG00000000217	raver1	98	73.728	Xiphophorus_maculatus