EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000021277 (Gene tree)
Gene ID: 103392612
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 23172 bases
Position: chr17:2206218-2229389
Accession: 103392612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033143	zf-C2H2_jaz	PF12171.8	5.2e-06	1	1
ENSCSEP00000033141	zf-C2H2_jaz	PF12171.8	5.2e-06	1	1
ENSCSEP00000033140	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSCSEP00000033140	G-patch	PF01585.23	1.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033568	-	5276	XM_008329255	ENSCSEP00000033141	1425 (aa)	XP_008327477	UPI0004965388
ENSCSET00000033570	-	4386	XM_008329258	ENSCSEP00000033143	1409 (aa)	XP_008327480	UPI0004982273
ENSCSET00000033567	-	5287	XM_008329254	ENSCSEP00000033140	1488 (aa)	XP_008327476	UPI000495EAA7

Gene Model

Click here to download ENSCSEG00000021277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021277	gpatch8	100	83.735	ENSAPOG00000023938	gpatch8	100	83.735	Acanthochromis_polyacanthus
ENSCSEG00000021277	gpatch8	100	80.975	ENSACIG00000012241	gpatch8	100	80.975	Amphilophus_citrinellus
ENSCSEG00000021277	gpatch8	100	83.266	ENSAOCG00000018102	gpatch8	100	83.266	Amphiprion_ocellaris
ENSCSEG00000021277	gpatch8	100	83.266	ENSAPEG00000016776	gpatch8	100	83.266	Amphiprion_percula
ENSCSEG00000021277	gpatch8	100	80.991	ENSATEG00000003247	gpatch8	100	80.857	Anabas_testudineus
ENSCSEG00000021277	gpatch8	100	80.320	ENSACLG00000004165	gpatch8	100	80.454	Astatotilapia_calliptera
ENSCSEG00000021277	gpatch8	73	58.741	ENSCLAG00000016710	GPATCH8	74	57.692	Chinchilla_lanigera
ENSCSEG00000021277	gpatch8	100	78.000	ENSCVAG00000013477	gpatch8	100	78.472	Cyprinodon_variegatus
ENSCSEG00000021277	gpatch8	100	62.736	ENSDARG00000059768	gpatch8	55	59.390	Danio_rerio
ENSCSEG00000021277	gpatch8	61	61.740	ENSELUG00000019920	gpatch8	56	61.442	Esox_lucius
ENSCSEG00000021277	gpatch8	55	67.981	ENSFHEG00000005791	gpatch8	100	76.514	Fundulus_heteroclitus
ENSCSEG00000021277	gpatch8	100	78.319	ENSGAFG00000018138	gpatch8	100	77.985	Gambusia_affinis
ENSCSEG00000021277	gpatch8	100	80.080	ENSHBUG00000002669	gpatch8	100	80.426	Haplochromis_burtoni
ENSCSEG00000021277	gpatch8	73	55.201	ENSHGLG00100010738	GPATCH8	91	57.243	Heterocephalus_glaber_male
ENSCSEG00000021277	gpatch8	100	71.552	ENSHCOG00000017518	gpatch8	56	65.459	Hippocampus_comes
ENSCSEG00000021277	gpatch8	100	61.578	ENSIPUG00000015431	gpatch8	55	58.986	Ictalurus_punctatus
ENSCSEG00000021277	gpatch8	100	81.338	ENSLBEG00000023352	gpatch8	100	81.338	Labrus_bergylta
ENSCSEG00000021277	gpatch8	61	80.172	ENSLOCG00000012265	gpatch8	69	80.172	Lepisosteus_oculatus
ENSCSEG00000021277	gpatch8	100	82.120	ENSMAMG00000001618	gpatch8	100	82.261	Mastacembelus_armatus
ENSCSEG00000021277	gpatch8	100	80.320	ENSMZEG00005022584	gpatch8	100	80.454	Maylandia_zebra
ENSCSEG00000021277	gpatch8	61	75.900	ENSMMOG00000020472	gpatch8	55	74.248	Mola_mola
ENSCSEG00000021277	gpatch8	100	78.371	ENSMALG00000004204	gpatch8	100	77.637	Monopterus_albus
ENSCSEG00000021277	gpatch8	50	60.571	ENSMLUG00000013840	GPATCH8	53	60.465	Myotis_lucifugus
ENSCSEG00000021277	gpatch8	100	80.587	ENSNBRG00000016402	gpatch8	100	80.720	Neolamprologus_brichardi
ENSCSEG00000021277	gpatch8	100	77.741	ENSONIG00000001292	gpatch8	100	79.390	Oreochromis_niloticus
ENSCSEG00000021277	gpatch8	56	69.149	ENSORLG00000028497	gpatch8	56	69.011	Oryzias_latipes
ENSCSEG00000021277	gpatch8	61	51.761	ENSPKIG00000018753	gpatch8	56	52.712	Paramormyrops_kingsleyae
ENSCSEG00000021277	gpatch8	100	77.919	ENSPFOG00000014833	gpatch8	100	78.052	Poecilia_formosa
ENSCSEG00000021277	gpatch8	100	77.652	ENSPLAG00000001035	gpatch8	100	77.785	Poecilia_latipinna
ENSCSEG00000021277	gpatch8	100	78.185	ENSPMEG00000024032	gpatch8	100	77.985	Poecilia_mexicana
ENSCSEG00000021277	gpatch8	100	78.110	ENSPREG00000008911	gpatch8	100	77.778	Poecilia_reticulata
ENSCSEG00000021277	gpatch8	100	80.454	ENSPNYG00000009426	gpatch8	100	80.587	Pundamilia_nyererei
ENSCSEG00000021277	gpatch8	59	61.033	ENSPNAG00000016200	gpatch8	58	60.341	Pygocentrus_nattereri
ENSCSEG00000021277	gpatch8	55	54.206	ENSSFOG00015021377	-	51	55.542	Scleropages_formosus
ENSCSEG00000021277	gpatch8	55	54.954	ENSSFOG00015004299	GPATCH8	55	57.009	Scleropages_formosus
ENSCSEG00000021277	gpatch8	100	83.057	ENSSDUG00000018065	gpatch8	100	83.299	Seriola_dumerili
ENSCSEG00000021277	gpatch8	100	83.800	ENSSLDG00000009225	gpatch8	100	84.133	Seriola_lalandi_dorsalis
ENSCSEG00000021277	gpatch8	100	82.999	ENSSPAG00000011368	gpatch8	100	82.999	Stegastes_partitus
ENSCSEG00000021277	gpatch8	100	75.848	ENSTRUG00000020474	gpatch8	100	75.848	Takifugu_rubripes
ENSCSEG00000021277	gpatch8	100	77.807	ENSXCOG00000016680	gpatch8	100	77.674	Xiphophorus_couchianus
ENSCSEG00000021277	gpatch8	100	77.793	ENSXMAG00000009217	gpatch8	100	77.793	Xiphophorus_maculatus