EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000021313 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 3825 bases
Position: chr20:12841571-12845395
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033202	zf-C2H2	PF00096.26	1.2e-20	1	4
ENSCSEP00000033202	zf-C2H2	PF00096.26	1.2e-20	2	4
ENSCSEP00000033202	zf-C2H2	PF00096.26	1.2e-20	3	4
ENSCSEP00000033202	zf-C2H2	PF00096.26	1.2e-20	4	4
ENSCSEP00000033202	zf-met	PF12874.7	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033629	-	1056	-	ENSCSEP00000033202	351 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000021313's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021313's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000021313	-	55	49.541	ENSCSEG00000003757	-	99	50.602
ENSCSEG00000021313	-	52	33.945	ENSCSEG00000011586	znf236	79	33.945
ENSCSEG00000021313	-	51	45.536	ENSCSEG00000001771	-	66	45.536
ENSCSEG00000021313	-	51	45.536	ENSCSEG00000020730	-	80	50.000
ENSCSEG00000021313	-	50	38.938	ENSCSEG00000000356	znf648	97	38.938
ENSCSEG00000021313	-	52	43.750	ENSCSEG00000004273	-	71	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021313	-	53	39.815	ENSAMEG00000003802	-	95	39.815	Ailuropoda_melanoleuca
ENSCSEG00000021313	-	50	48.214	ENSACIG00000017050	-	94	48.214	Amphilophus_citrinellus
ENSCSEG00000021313	-	51	42.342	ENSACIG00000004626	-	82	42.342	Amphilophus_citrinellus
ENSCSEG00000021313	-	51	43.200	ENSATEG00000008771	-	60	43.200	Anabas_testudineus
ENSCSEG00000021313	-	50	44.304	ENSACLG00000024308	-	99	47.321	Astatotilapia_calliptera
ENSCSEG00000021313	-	63	46.429	ENSACLG00000011237	-	99	42.373	Astatotilapia_calliptera
ENSCSEG00000021313	-	67	48.214	ENSAMXG00000037760	-	97	48.214	Astyanax_mexicanus
ENSCSEG00000021313	-	52	52.000	ENSAMXG00000030911	-	65	52.000	Astyanax_mexicanus
ENSCSEG00000021313	-	55	49.107	ENSAMXG00000010930	-	87	49.107	Astyanax_mexicanus
ENSCSEG00000021313	-	53	49.107	ENSAMXG00000036915	-	91	49.107	Astyanax_mexicanus
ENSCSEG00000021313	-	58	48.571	ENSELUG00000013245	-	83	48.750	Esox_lucius
ENSCSEG00000021313	-	50	44.068	ENSELUG00000005912	-	84	45.455	Esox_lucius
ENSCSEG00000021313	-	55	47.664	ENSELUG00000013094	-	98	48.214	Esox_lucius
ENSCSEG00000021313	-	50	50.000	ENSELUG00000012597	-	97	50.000	Esox_lucius
ENSCSEG00000021313	-	51	43.200	ENSFHEG00000016663	-	61	43.200	Fundulus_heteroclitus
ENSCSEG00000021313	-	69	39.130	ENSGAFG00000016322	-	64	39.130	Gambusia_affinis
ENSCSEG00000021313	-	50	48.315	ENSGACG00000005239	-	85	48.315	Gasterosteus_aculeatus
ENSCSEG00000021313	-	63	43.750	ENSHBUG00000006977	-	56	43.750	Haplochromis_burtoni
ENSCSEG00000021313	-	57	44.898	ENSHBUG00000003057	-	92	44.898	Haplochromis_burtoni
ENSCSEG00000021313	-	50	45.794	ENSHCOG00000015441	-	68	45.794	Hippocampus_comes
ENSCSEG00000021313	-	64	44.643	ENSHCOG00000001942	-	93	54.839	Hippocampus_comes
ENSCSEG00000021313	-	63	45.977	ENSHCOG00000015414	-	63	45.455	Hippocampus_comes
ENSCSEG00000021313	-	51	47.619	ENSHCOG00000001338	-	91	46.087	Hippocampus_comes
ENSCSEG00000021313	-	54	47.321	ENSHCOG00000000627	-	72	47.321	Hippocampus_comes
ENSCSEG00000021313	-	55	44.144	ENSHCOG00000019481	-	64	44.144	Hippocampus_comes
ENSCSEG00000021313	-	63	47.321	ENSHCOG00000021033	-	77	47.321	Hippocampus_comes
ENSCSEG00000021313	-	52	42.975	ENSIPUG00000023635	-	95	46.729	Ictalurus_punctatus
ENSCSEG00000021313	-	53	43.636	ENSKMAG00000000795	-	99	43.636	Kryptolebias_marmoratus
ENSCSEG00000021313	-	51	43.119	ENSLACG00000009642	-	99	43.119	Latimeria_chalumnae
ENSCSEG00000021313	-	53	42.202	ENSMALG00000012043	-	89	43.678	Monopterus_albus
ENSCSEG00000021313	-	65	49.541	ENSNBRG00000003250	-	89	54.206	Neolamprologus_brichardi
ENSCSEG00000021313	-	54	40.909	ENSONIG00000016734	-	68	40.909	Oreochromis_niloticus
ENSCSEG00000021313	-	50	46.429	ENSONIG00000020719	-	95	46.429	Oreochromis_niloticus
ENSCSEG00000021313	-	54	46.789	ENSORLG00015008496	-	98	51.456	Oryzias_latipes_hsok
ENSCSEG00000021313	-	54	46.226	ENSOMEG00000019853	-	91	46.226	Oryzias_melastigma
ENSCSEG00000021313	-	62	43.697	ENSPKIG00000012069	-	96	45.045	Paramormyrops_kingsleyae
ENSCSEG00000021313	-	54	50.893	ENSPKIG00000006563	-	99	50.893	Paramormyrops_kingsleyae
ENSCSEG00000021313	-	50	44.643	ENSPMGG00000018639	-	97	44.643	Periophthalmus_magnuspinnatus
ENSCSEG00000021313	-	71	43.902	ENSPMGG00000010453	-	90	43.902	Periophthalmus_magnuspinnatus
ENSCSEG00000021313	-	50	52.809	ENSPFOG00000004414	-	100	52.809	Poecilia_formosa
ENSCSEG00000021313	-	50	42.056	ENSPFOG00000017913	-	97	40.594	Poecilia_formosa
ENSCSEG00000021313	-	50	49.524	ENSPNAG00000012206	-	94	49.524	Pygocentrus_nattereri
ENSCSEG00000021313	-	50	50.962	ENSSMAG00000015347	-	80	50.962	Scophthalmus_maximus
ENSCSEG00000021313	-	50	47.619	ENSXETG00000002717	-	99	47.619	Xenopus_tropicalis
ENSCSEG00000021313	-	50	48.214	ENSXCOG00000007957	-	83	48.214	Xiphophorus_couchianus
ENSCSEG00000021313	-	50	43.636	ENSXMAG00000027437	-	71	43.636	Xiphophorus_maculatus
ENSCSEG00000021313	-	69	39.130	ENSXMAG00000026515	-	56	39.130	Xiphophorus_maculatus
ENSCSEG00000021313	-	50	45.794	ENSXMAG00000020039	-	95	48.598	Xiphophorus_maculatus
ENSCSEG00000021313	-	63	46.847	ENSXMAG00000026679	-	99	49.107	Xiphophorus_maculatus