EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000021412 (Gene tree)
Gene ID: 103396695
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 6424 bases
Position: chr20:13291749-13298172
Accession: 103396695
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033372	KH_1	PF00013.29	2.3e-67	1	4
ENSCSEP00000033372	KH_1	PF00013.29	2.3e-67	2	4
ENSCSEP00000033372	KH_1	PF00013.29	2.3e-67	3	4
ENSCSEP00000033372	KH_1	PF00013.29	2.3e-67	4	4
ENSCSEP00000033371	KH_1	PF00013.29	2.4e-67	1	4
ENSCSEP00000033371	KH_1	PF00013.29	2.4e-67	2	4
ENSCSEP00000033371	KH_1	PF00013.29	2.4e-67	3	4
ENSCSEP00000033371	KH_1	PF00013.29	2.4e-67	4	4
ENSCSEP00000033371	KH_2	PF07650.17	8.8e-20	1	1
ENSCSEP00000033372	KH_2	PF07650.17	1.3e-19	1	1
ENSCSEP00000033372	DUF1897	PF09005.10	2.8e-12	1	2
ENSCSEP00000033372	DUF1897	PF09005.10	2.8e-12	2	2
ENSCSEP00000033371	DUF1897	PF09005.10	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033806	-	1911	-	ENSCSEP00000033372	636 (aa)	-	-
ENSCSET00000033805	-	2112	XM_008334888	ENSCSEP00000033371	640 (aa)	XP_008333110	UPI000495C977

Gene Model

Click here to download ENSCSEG00000021412's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021412's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000021412	fubp1	56	30.909	ENSCSEG00000012106	igf2bp3	65	30.726
ENSCSEG00000021412	fubp1	61	36.364	ENSCSEG00000005887	NOVA1	65	36.364
ENSCSEG00000021412	fubp1	50	39.062	ENSCSEG00000016984	-	64	35.897
ENSCSEG00000021412	fubp1	61	37.879	ENSCSEG00000017718	nova1	54	37.879
ENSCSEG00000021412	fubp1	59	41.538	ENSCSEG00000010020	zgc:110045	70	41.538
ENSCSEG00000021412	fubp1	58	42.647	ENSCSEG00000010540	PCBP2	71	42.857
ENSCSEG00000021412	fubp1	55	42.857	ENSCSEG00000021490	pcbp2	91	42.857
ENSCSEG00000021412	fubp1	95	47.650	ENSCSEG00000008761	-	98	47.565
ENSCSEG00000021412	fubp1	98	51.156	ENSCSEG00000011429	khsrp	98	51.638
ENSCSEG00000021412	fubp1	95	48.046	ENSCSEG00000017815	FUBP3	75	57.541
ENSCSEG00000021412	fubp1	52	37.500	ENSCSEG00000000822	pcbp3	74	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021412	fubp1	70	76.096	ENSG00000162613	FUBP1	100	70.661	Homo_sapiens
ENSCSEG00000021412	fubp1	99	89.269	ENSAPOG00000014845	fubp1	98	89.671	Acanthochromis_polyacanthus
ENSCSEG00000021412	fubp1	70	72.651	ENSAMEG00000007372	FUBP1	100	68.398	Ailuropoda_melanoleuca
ENSCSEG00000021412	fubp1	100	87.520	ENSACIG00000020024	fubp1	100	88.226	Amphilophus_citrinellus
ENSCSEG00000021412	fubp1	100	88.594	ENSAPEG00000012232	fubp1	100	89.117	Amphiprion_percula
ENSCSEG00000021412	fubp1	98	94.118	ENSATEG00000018619	fubp1	100	94.754	Anabas_testudineus
ENSCSEG00000021412	fubp1	64	78.935	ENSAPLG00000005965	FUBP1	100	71.639	Anas_platyrhynchos
ENSCSEG00000021412	fubp1	69	73.784	ENSACAG00000006310	FUBP1	96	65.066	Anolis_carolinensis
ENSCSEG00000021412	fubp1	98	93.920	ENSACLG00000006708	fubp1	97	94.560	Astatotilapia_calliptera
ENSCSEG00000021412	fubp1	85	85.876	ENSAMXG00000005525	fubp1	99	85.876	Astyanax_mexicanus
ENSCSEG00000021412	fubp1	70	76.316	ENSCJAG00000007062	FUBP1	100	70.706	Callithrix_jacchus
ENSCSEG00000021412	fubp1	70	76.316	ENSCAFG00000020361	FUBP1	100	70.814	Canis_familiaris
ENSCSEG00000021412	fubp1	65	77.938	ENSTSYG00000000148	FUBP1	100	71.195	Carlito_syrichta
ENSCSEG00000021412	fubp1	54	81.452	ENSCAPG00000011052	-	65	81.452	Cavia_aperea
ENSCSEG00000021412	fubp1	70	76.522	ENSCPOG00000002757	FUBP1	98	70.946	Cavia_porcellus
ENSCSEG00000021412	fubp1	70	62.356	ENSCCAG00000036537	FUBP1	100	63.714	Cebus_capucinus
ENSCSEG00000021412	fubp1	70	76.096	ENSCATG00000042126	FUBP1	100	70.661	Cercocebus_atys
ENSCSEG00000021412	fubp1	70	76.522	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSCSEG00000021412	fubp1	70	76.096	ENSCSAG00000001402	FUBP1	100	70.661	Chlorocebus_sabaeus
ENSCSEG00000021412	fubp1	70	76.368	ENSCHOG00000008177	FUBP1	98	70.923	Choloepus_hoffmanni
ENSCSEG00000021412	fubp1	69	78.571	ENSCGRG00001007103	Fubp1	100	71.032	Cricetulus_griseus_chok1gshd
ENSCSEG00000021412	fubp1	64	78.469	ENSCGRG00000003372	Fubp1	100	70.847	Cricetulus_griseus_crigri
ENSCSEG00000021412	fubp1	98	89.417	ENSCVAG00000014487	fubp1	99	89.877	Cyprinodon_variegatus
ENSCSEG00000021412	fubp1	98	81.085	ENSDARG00000029248	fubp1	100	82.946	Danio_rerio
ENSCSEG00000021412	fubp1	83	58.025	ENSDNOG00000034565	-	83	57.508	Dasypus_novemcinctus
ENSCSEG00000021412	fubp1	70	76.316	ENSDORG00000016534	Fubp1	98	70.769	Dipodomys_ordii
ENSCSEG00000021412	fubp1	77	76.012	ENSETEG00000000948	-	58	76.901	Echinops_telfairi
ENSCSEG00000021412	fubp1	65	72.222	ENSEBUG00000016143	fubp1	68	66.071	Eptatretus_burgeri
ENSCSEG00000021412	fubp1	68	80.405	ENSEEUG00000001287	FUBP1	87	67.762	Erinaceus_europaeus
ENSCSEG00000021412	fubp1	98	82.969	ENSELUG00000007990	fubp1	100	83.594	Esox_lucius
ENSCSEG00000021412	fubp1	69	77.827	ENSFALG00000005768	FUBP1	97	71.296	Ficedula_albicollis
ENSCSEG00000021412	fubp1	70	76.304	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSCSEG00000021412	fubp1	98	93.005	ENSFHEG00000005230	fubp1	100	93.641	Fundulus_heteroclitus
ENSCSEG00000021412	fubp1	100	85.446	ENSGMOG00000003370	fubp1	100	85.446	Gadus_morhua
ENSCSEG00000021412	fubp1	69	78.319	ENSGALG00000008939	FUBP1	100	72.043	Gallus_gallus
ENSCSEG00000021412	fubp1	98	91.562	ENSGAFG00000020972	fubp1	100	92.188	Gambusia_affinis
ENSCSEG00000021412	fubp1	100	90.172	ENSGACG00000016563	fubp1	100	90.328	Gasterosteus_aculeatus
ENSCSEG00000021412	fubp1	100	88.754	ENSHBUG00000009835	fubp1	100	90.491	Haplochromis_burtoni
ENSCSEG00000021412	fubp1	72	71.922	ENSHGLG00000002808	-	100	64.110	Heterocephalus_glaber_female
ENSCSEG00000021412	fubp1	70	76.522	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSCSEG00000021412	fubp1	70	76.522	ENSHGLG00100003417	-	100	70.336	Heterocephalus_glaber_male
ENSCSEG00000021412	fubp1	72	72.570	ENSHGLG00100001414	-	100	64.724	Heterocephalus_glaber_male
ENSCSEG00000021412	fubp1	98	91.163	ENSHCOG00000000910	fubp1	100	91.473	Hippocampus_comes
ENSCSEG00000021412	fubp1	98	82.911	ENSIPUG00000009896	fubp1	100	84.019	Ictalurus_punctatus
ENSCSEG00000021412	fubp1	69	77.405	ENSSTOG00000014312	FUBP1	100	70.814	Ictidomys_tridecemlineatus
ENSCSEG00000021412	fubp1	70	77.042	ENSJJAG00000020069	Fubp1	100	70.579	Jaculus_jaculus
ENSCSEG00000021412	fubp1	100	88.106	ENSKMAG00000018897	fubp1	100	88.732	Kryptolebias_marmoratus
ENSCSEG00000021412	fubp1	99	86.880	ENSLBEG00000012700	fubp1	99	87.172	Labrus_bergylta
ENSCSEG00000021412	fubp1	97	75.566	ENSLOCG00000003745	fubp1	100	74.348	Lepisosteus_oculatus
ENSCSEG00000021412	fubp1	70	73.263	ENSLAFG00000003273	FUBP1	99	72.302	Loxodonta_africana
ENSCSEG00000021412	fubp1	70	76.096	ENSMFAG00000031825	FUBP1	100	70.552	Macaca_fascicularis
ENSCSEG00000021412	fubp1	69	77.181	ENSMMUG00000002899	FUBP1	100	70.661	Macaca_mulatta
ENSCSEG00000021412	fubp1	70	76.096	ENSMNEG00000045212	FUBP1	100	70.661	Macaca_nemestrina
ENSCSEG00000021412	fubp1	98	89.864	ENSMAMG00000007489	fubp1	99	89.410	Mastacembelus_armatus
ENSCSEG00000021412	fubp1	98	93.939	ENSMZEG00005024298	fubp1	100	94.577	Maylandia_zebra
ENSCSEG00000021412	fubp1	64	78.986	ENSMGAG00000009424	FUBP1	100	71.941	Meleagris_gallopavo
ENSCSEG00000021412	fubp1	70	76.535	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSCSEG00000021412	fubp1	70	76.703	ENSMOCG00000014751	Fubp1	100	70.788	Microtus_ochrogaster
ENSCSEG00000021412	fubp1	87	92.818	ENSMMOG00000019463	fubp1	98	93.370	Mola_mola
ENSCSEG00000021412	fubp1	66	71.076	ENSMODG00000020804	FUBP1	100	65.785	Monodelphis_domestica
ENSCSEG00000021412	fubp1	98	94.108	ENSMALG00000015173	fubp1	100	94.745	Monopterus_albus
ENSCSEG00000021412	fubp1	69	77.951	MGP_CAROLIEiJ_G0025740	Fubp1	99	74.427	Mus_caroli
ENSCSEG00000021412	fubp1	69	77.728	ENSMUSG00000028034	Fubp1	99	74.237	Mus_musculus
ENSCSEG00000021412	fubp1	69	77.778	MGP_PahariEiJ_G0027191	Fubp1	99	74.286	Mus_pahari
ENSCSEG00000021412	fubp1	69	77.951	MGP_SPRETEiJ_G0026693	Fubp1	99	74.427	Mus_spretus
ENSCSEG00000021412	fubp1	70	72.500	ENSMLUG00000014802	FUBP1	100	67.947	Myotis_lucifugus
ENSCSEG00000021412	fubp1	70	73.392	ENSNGAG00000014302	Fubp1	100	68.413	Nannospalax_galili
ENSCSEG00000021412	fubp1	100	88.679	ENSNBRG00000015099	fubp1	100	89.936	Neolamprologus_brichardi
ENSCSEG00000021412	fubp1	70	72.648	ENSNLEG00000009772	FUBP1	100	68.405	Nomascus_leucogenys
ENSCSEG00000021412	fubp1	55	81.863	ENSMEUG00000007917	-	64	81.863	Notamacropus_eugenii
ENSCSEG00000021412	fubp1	69	88.679	ENSOPRG00000001175	FUBP1	91	68.481	Ochotona_princeps
ENSCSEG00000021412	fubp1	70	76.522	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSCSEG00000021412	fubp1	99	52.574	ENSODEG00000003657	-	99	51.111	Octodon_degus
ENSCSEG00000021412	fubp1	98	93.333	ENSONIG00000018381	fubp1	99	93.968	Oreochromis_niloticus
ENSCSEG00000021412	fubp1	60	78.205	ENSOANG00000009777	FUBP1	99	64.630	Ornithorhynchus_anatinus
ENSCSEG00000021412	fubp1	98	88.301	ENSORLG00000003540	fubp1	99	87.821	Oryzias_latipes
ENSCSEG00000021412	fubp1	100	86.295	ENSORLG00020005908	fubp1	99	88.141	Oryzias_latipes_hni
ENSCSEG00000021412	fubp1	98	92.429	ENSORLG00015008779	fubp1	100	92.114	Oryzias_latipes_hsok
ENSCSEG00000021412	fubp1	100	87.107	ENSOMEG00000021943	fubp1	100	87.107	Oryzias_melastigma
ENSCSEG00000021412	fubp1	70	72.349	ENSOGAG00000014233	FUBP1	100	67.994	Otolemur_garnettii
ENSCSEG00000021412	fubp1	69	77.263	ENSOARG00000013259	FUBP1	100	68.148	Ovis_aries
ENSCSEG00000021412	fubp1	70	76.316	ENSPPRG00000000413	FUBP1	100	70.814	Panthera_pardus
ENSCSEG00000021412	fubp1	70	76.316	ENSPTIG00000019450	FUBP1	100	70.814	Panthera_tigris_altaica
ENSCSEG00000021412	fubp1	65	77.857	ENSPSIG00000012965	FUBP1	100	71.082	Pelodiscus_sinensis
ENSCSEG00000021412	fubp1	99	83.307	ENSPMGG00000009060	fubp1	99	82.059	Periophthalmus_magnuspinnatus
ENSCSEG00000021412	fubp1	69	77.925	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSCSEG00000021412	fubp1	61	59.825	ENSPMAG00000001644	-	93	59.825	Petromyzon_marinus
ENSCSEG00000021412	fubp1	100	87.879	ENSPFOG00000000238	fubp1	100	90.214	Poecilia_formosa
ENSCSEG00000021412	fubp1	98	91.214	ENSPLAG00000021170	fubp1	100	91.214	Poecilia_latipinna
ENSCSEG00000021412	fubp1	99	89.590	ENSPMEG00000004747	fubp1	100	89.886	Poecilia_mexicana
ENSCSEG00000021412	fubp1	98	93.142	ENSPREG00000017911	fubp1	99	93.780	Poecilia_reticulata
ENSCSEG00000021412	fubp1	72	75.532	ENSPPYG00000001219	-	68	77.605	Pongo_abelii
ENSCSEG00000021412	fubp1	70	76.535	ENSPCAG00000012617	FUBP1	98	70.724	Procavia_capensis
ENSCSEG00000021412	fubp1	70	76.368	ENSPCOG00000024974	FUBP1	100	70.814	Propithecus_coquereli
ENSCSEG00000021412	fubp1	70	70.175	ENSPVAG00000014637	FUBP1	98	66.462	Pteropus_vampyrus
ENSCSEG00000021412	fubp1	98	93.939	ENSPNYG00000004552	fubp1	100	94.577	Pundamilia_nyererei
ENSCSEG00000021412	fubp1	98	83.156	ENSPNAG00000016207	fubp1	100	85.129	Pygocentrus_nattereri
ENSCSEG00000021412	fubp1	69	77.951	ENSRNOG00000043370	Fubp1	100	70.814	Rattus_norvegicus
ENSCSEG00000021412	fubp1	70	76.149	ENSRBIG00000042950	FUBP1	100	70.661	Rhinopithecus_bieti
ENSCSEG00000021412	fubp1	70	76.149	ENSRROG00000043534	FUBP1	100	70.661	Rhinopithecus_roxellana
ENSCSEG00000021412	fubp1	70	76.316	ENSSBOG00000027299	FUBP1	98	73.084	Saimiri_boliviensis_boliviensis
ENSCSEG00000021412	fubp1	64	77.251	ENSSHAG00000005367	FUBP1	100	72.172	Sarcophilus_harrisii
ENSCSEG00000021412	fubp1	97	83.654	ENSSFOG00015010213	fubp1	98	83.494	Scleropages_formosus
ENSCSEG00000021412	fubp1	100	85.131	ENSSMAG00000012029	fubp1	100	87.026	Scophthalmus_maximus
ENSCSEG00000021412	fubp1	99	92.649	ENSSDUG00000007383	fubp1	97	93.262	Seriola_dumerili
ENSCSEG00000021412	fubp1	100	92.672	ENSSLDG00000022863	fubp1	100	93.282	Seriola_lalandi_dorsalis
ENSCSEG00000021412	fubp1	70	87.356	ENSSARG00000011730	FUBP1	56	88.372	Sorex_araneus
ENSCSEG00000021412	fubp1	99	65.676	ENSSPUG00000008389	FUBP1	100	62.678	Sphenodon_punctatus
ENSCSEG00000021412	fubp1	99	92.902	ENSSPAG00000010161	fubp1	99	92.744	Stegastes_partitus
ENSCSEG00000021412	fubp1	64	78.043	ENSTGUG00000006841	FUBP1	100	71.104	Taeniopygia_guttata
ENSCSEG00000021412	fubp1	100	83.187	ENSTRUG00000004615	fubp1	100	84.661	Takifugu_rubripes
ENSCSEG00000021412	fubp1	78	80.357	ENSTBEG00000017333	FUBP1	62	80.952	Tupaia_belangeri
ENSCSEG00000021412	fubp1	70	76.316	ENSTTRG00000000096	FUBP1	98	70.615	Tursiops_truncatus
ENSCSEG00000021412	fubp1	70	76.316	ENSVPAG00000004709	FUBP1	99	70.615	Vicugna_pacos
ENSCSEG00000021412	fubp1	100	83.673	ENSXCOG00000019354	fubp1	100	82.786	Xiphophorus_couchianus
ENSCSEG00000021412	fubp1	97	88.691	ENSXMAG00000007168	fubp1	99	93.208	Xiphophorus_maculatus