EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000021519 (Gene tree)
Gene ID: 103392734
Gene Symbol: -
Alias: -
Full Name: GTPase IMAP family member 8-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 9313 bases
Position: chr17:2791044-2800356
Accession: 103392734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033530	MMR_HSR1	PF01926.23	1e-18	1	1
ENSCSEP00000033528	MMR_HSR1	PF01926.23	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033964	-	5745	XM_008329439	ENSCSEP00000033530	935 (aa)	XP_008327661	UPI0004958109
ENSCSET00000033962	-	1800	-	ENSCSEP00000033528	599 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000021519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000021519	-	76	36.364	ENSCSEG00000002150	zgc:113625	66	36.364
ENSCSEG00000021519	-	82	33.333	ENSCSEG00000004728	-	85	33.333
ENSCSEG00000021519	-	78	35.185	ENSCSEG00000013762	-	50	35.519
ENSCSEG00000021519	-	84	33.155	ENSCSEG00000001223	-	83	33.508
ENSCSEG00000021519	-	78	31.088	ENSCSEG00000001229	-	78	30.279
ENSCSEG00000021519	-	79	30.052	ENSCSEG00000006826	-	62	31.068

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021519	-	86	33.884	ENSAPOG00000006502	-	60	34.956	Acanthochromis_polyacanthus
ENSCSEG00000021519	-	99	58.933	ENSAPOG00000019154	-	99	59.200	Acanthochromis_polyacanthus
ENSCSEG00000021519	-	83	61.628	ENSACIG00000007725	-	78	70.476	Amphilophus_citrinellus
ENSCSEG00000021519	-	75	46.078	ENSACIG00000009811	-	88	39.604	Amphilophus_citrinellus
ENSCSEG00000021519	-	87	59.716	ENSACIG00000007737	-	88	59.716	Amphilophus_citrinellus
ENSCSEG00000021519	-	85	38.043	ENSAOCG00000004579	-	92	37.838	Amphiprion_ocellaris
ENSCSEG00000021519	-	87	60.638	ENSAOCG00000003425	-	100	52.569	Amphiprion_ocellaris
ENSCSEG00000021519	-	85	38.286	ENSAPEG00000014403	-	73	38.389	Amphiprion_percula
ENSCSEG00000021519	-	100	61.628	ENSAPEG00000001491	-	99	61.734	Amphiprion_percula
ENSCSEG00000021519	-	84	62.500	ENSATEG00000023053	-	100	62.780	Anabas_testudineus
ENSCSEG00000021519	-	86	37.500	ENSATEG00000015654	-	82	37.500	Anabas_testudineus
ENSCSEG00000021519	-	86	36.702	ENSACLG00000014795	-	86	38.163	Astatotilapia_calliptera
ENSCSEG00000021519	-	78	37.306	ENSAMXG00000026085	-	85	37.500	Astyanax_mexicanus
ENSCSEG00000021519	-	87	37.500	ENSAMXG00000030744	-	95	41.038	Astyanax_mexicanus
ENSCSEG00000021519	-	86	40.580	ENSAMXG00000021387	-	73	40.580	Astyanax_mexicanus
ENSCSEG00000021519	-	76	34.807	ENSAMXG00000009216	-	87	36.000	Astyanax_mexicanus
ENSCSEG00000021519	-	86	34.896	ENSAMXG00000019109	-	99	40.609	Astyanax_mexicanus
ENSCSEG00000021519	-	92	34.321	ENSAMXG00000033117	-	97	36.574	Astyanax_mexicanus
ENSCSEG00000021519	-	86	39.024	ENSAMXG00000006064	-	81	37.415	Astyanax_mexicanus
ENSCSEG00000021519	-	77	42.593	ENSCVAG00000005778	-	90	38.251	Cyprinodon_variegatus
ENSCSEG00000021519	-	83	60.606	ENSCVAG00000003054	-	94	64.103	Cyprinodon_variegatus
ENSCSEG00000021519	-	80	49.057	ENSCVAG00000012268	-	98	34.106	Cyprinodon_variegatus
ENSCSEG00000021519	-	82	40.107	ENSDARG00000102683	CR626941.1	89	41.633	Danio_rerio
ENSCSEG00000021519	-	99	40.145	ENSDARG00000063481	si:ch211-214j24.15	96	40.145	Danio_rerio
ENSCSEG00000021519	-	80	41.667	ENSELUG00000018709	-	72	38.298	Esox_lucius
ENSCSEG00000021519	-	84	46.154	ENSELUG00000018192	-	98	48.293	Esox_lucius
ENSCSEG00000021519	-	84	46.995	ENSELUG00000024502	-	74	49.751	Esox_lucius
ENSCSEG00000021519	-	74	34.211	ENSELUG00000003217	-	93	34.010	Esox_lucius
ENSCSEG00000021519	-	86	36.269	ENSFHEG00000020783	-	98	36.269	Fundulus_heteroclitus
ENSCSEG00000021519	-	88	63.095	ENSFHEG00000023334	-	86	63.095	Fundulus_heteroclitus
ENSCSEG00000021519	-	81	56.425	ENSGMOG00000001626	-	100	56.425	Gadus_morhua
ENSCSEG00000021519	-	86	38.764	ENSGAFG00000020826	-	99	38.764	Gambusia_affinis
ENSCSEG00000021519	-	77	41.530	ENSHBUG00000016284	-	99	41.758	Haplochromis_burtoni
ENSCSEG00000021519	-	89	33.047	ENSHBUG00000001242	-	69	34.286	Haplochromis_burtoni
ENSCSEG00000021519	-	86	52.117	ENSHBUG00000008326	-	100	59.746	Haplochromis_burtoni
ENSCSEG00000021519	-	83	36.893	ENSIPUG00000013342	-	89	36.893	Ictalurus_punctatus
ENSCSEG00000021519	-	91	40.741	ENSKMAG00000004774	-	82	37.705	Kryptolebias_marmoratus
ENSCSEG00000021519	-	83	59.884	ENSKMAG00000009600	-	100	64.664	Kryptolebias_marmoratus
ENSCSEG00000021519	-	81	41.477	ENSKMAG00000014764	-	100	43.284	Kryptolebias_marmoratus
ENSCSEG00000021519	-	84	40.513	ENSKMAG00000014605	-	75	41.573	Kryptolebias_marmoratus
ENSCSEG00000021519	-	84	41.489	ENSLBEG00000019652	-	80	44.149	Labrus_bergylta
ENSCSEG00000021519	-	82	42.857	ENSLOCG00000017852	-	82	43.421	Lepisosteus_oculatus
ENSCSEG00000021519	-	83	41.758	ENSLOCG00000000082	-	95	42.259	Lepisosteus_oculatus
ENSCSEG00000021519	-	84	42.708	ENSLOCG00000012075	-	98	47.179	Lepisosteus_oculatus
ENSCSEG00000021519	-	84	40.782	ENSLOCG00000000517	-	74	42.060	Lepisosteus_oculatus
ENSCSEG00000021519	-	84	42.012	ENSLOCG00000000385	-	80	42.041	Lepisosteus_oculatus
ENSCSEG00000021519	-	84	45.902	ENSLOCG00000018072	-	97	45.902	Lepisosteus_oculatus
ENSCSEG00000021519	-	84	40.426	ENSLOCG00000016496	-	69	39.167	Lepisosteus_oculatus
ENSCSEG00000021519	-	86	36.216	ENSMAMG00000015600	-	77	37.530	Mastacembelus_armatus
ENSCSEG00000021519	-	86	69.149	ENSMAMG00000021970	-	99	67.580	Mastacembelus_armatus
ENSCSEG00000021519	-	98	58.369	ENSMAMG00000021969	-	99	58.369	Mastacembelus_armatus
ENSCSEG00000021519	-	83	40.212	ENSMMOG00000012876	-	71	42.795	Mola_mola
ENSCSEG00000021519	-	68	50.262	ENSMMOG00000016860	-	91	49.153	Mola_mola
ENSCSEG00000021519	-	85	58.768	ENSMMOG00000016864	-	98	58.373	Mola_mola
ENSCSEG00000021519	-	87	44.242	ENSNBRG00000002136	-	81	44.344	Neolamprologus_brichardi
ENSCSEG00000021519	-	99	56.277	ENSORLG00000002537	-	98	56.277	Oryzias_latipes
ENSCSEG00000021519	-	85	38.268	ENSORLG00000002031	-	66	40.426	Oryzias_latipes
ENSCSEG00000021519	-	91	56.724	ENSORLG00020011284	-	83	63.713	Oryzias_latipes_hni
ENSCSEG00000021519	-	81	37.356	ENSORLG00020017387	-	89	37.356	Oryzias_latipes_hni
ENSCSEG00000021519	-	85	37.709	ENSORLG00020008323	-	66	39.953	Oryzias_latipes_hni
ENSCSEG00000021519	-	86	40.107	ENSORLG00020008286	-	86	40.541	Oryzias_latipes_hni
ENSCSEG00000021519	-	99	56.443	ENSORLG00015004110	-	98	56.443	Oryzias_latipes_hsok
ENSCSEG00000021519	-	85	37.709	ENSORLG00015004522	-	65	39.762	Oryzias_latipes_hsok
ENSCSEG00000021519	-	78	35.593	ENSORLG00015023234	-	96	38.674	Oryzias_latipes_hsok
ENSCSEG00000021519	-	87	40.217	ENSOMEG00000010594	-	92	38.275	Oryzias_melastigma
ENSCSEG00000021519	-	87	54.300	ENSOMEG00000020433	-	90	62.661	Oryzias_melastigma
ENSCSEG00000021519	-	85	46.392	ENSPKIG00000017688	-	95	46.392	Paramormyrops_kingsleyae
ENSCSEG00000021519	-	83	45.902	ENSPKIG00000017193	-	85	48.731	Paramormyrops_kingsleyae
ENSCSEG00000021519	-	84	32.973	ENSPMGG00000017993	-	89	41.520	Periophthalmus_magnuspinnatus
ENSCSEG00000021519	-	81	60.106	ENSPMGG00000014056	-	98	51.969	Periophthalmus_magnuspinnatus
ENSCSEG00000021519	-	84	51.705	ENSPMGG00000014055	-	89	61.468	Periophthalmus_magnuspinnatus
ENSCSEG00000021519	-	87	36.771	ENSPFOG00000015865	-	99	37.330	Poecilia_formosa
ENSCSEG00000021519	-	88	38.065	ENSPFOG00000022853	-	98	37.131	Poecilia_formosa
ENSCSEG00000021519	-	83	38.793	ENSPFOG00000013349	-	83	38.793	Poecilia_formosa
ENSCSEG00000021519	-	86	36.313	ENSPFOG00000006124	-	98	37.705	Poecilia_formosa
ENSCSEG00000021519	-	87	33.673	ENSPFOG00000015871	-	99	35.924	Poecilia_formosa
ENSCSEG00000021519	-	88	40.179	ENSPFOG00000015875	-	91	40.179	Poecilia_formosa
ENSCSEG00000021519	-	91	39.894	ENSPFOG00000016787	-	98	39.151	Poecilia_formosa
ENSCSEG00000021519	-	86	36.239	ENSPFOG00000012732	-	81	36.458	Poecilia_formosa
ENSCSEG00000021519	-	83	39.683	ENSPFOG00000005689	si:dkey-185m8.2	74	40.097	Poecilia_formosa
ENSCSEG00000021519	-	79	38.889	ENSPFOG00000022479	-	92	38.122	Poecilia_formosa
ENSCSEG00000021519	-	85	41.176	ENSPFOG00000000191	-	81	40.870	Poecilia_formosa
ENSCSEG00000021519	-	81	43.396	ENSPFOG00000013109	-	95	37.261	Poecilia_formosa
ENSCSEG00000021519	-	86	37.000	ENSPLAG00000020776	-	95	35.797	Poecilia_latipinna
ENSCSEG00000021519	-	67	40.458	ENSPLAG00000018692	-	96	34.188	Poecilia_latipinna
ENSCSEG00000021519	-	85	39.362	ENSPLAG00000018606	-	85	40.526	Poecilia_latipinna
ENSCSEG00000021519	-	77	39.823	ENSPLAG00000018664	-	85	35.359	Poecilia_latipinna
ENSCSEG00000021519	-	86	36.816	ENSPLAG00000003020	-	92	35.537	Poecilia_latipinna
ENSCSEG00000021519	-	83	38.202	ENSPLAG00000018911	-	77	38.202	Poecilia_latipinna
ENSCSEG00000021519	-	64	45.882	ENSPMEG00000020252	-	73	45.882	Poecilia_mexicana
ENSCSEG00000021519	-	81	42.857	ENSPMEG00000005912	-	76	42.857	Poecilia_mexicana
ENSCSEG00000021519	-	75	35.119	ENSPMEG00000010605	-	85	35.119	Poecilia_mexicana
ENSCSEG00000021519	-	83	38.202	ENSPMEG00000018950	-	95	38.202	Poecilia_mexicana
ENSCSEG00000021519	-	91	38.830	ENSPMEG00000000604	-	76	39.151	Poecilia_mexicana
ENSCSEG00000021519	-	79	36.296	ENSPMEG00000000724	-	69	34.975	Poecilia_mexicana
ENSCSEG00000021519	-	81	41.284	ENSPMEG00000006334	-	76	41.284	Poecilia_mexicana
ENSCSEG00000021519	-	79	36.667	ENSPMEG00000020297	-	99	37.589	Poecilia_mexicana
ENSCSEG00000021519	-	80	42.453	ENSPREG00000001530	-	78	36.697	Poecilia_reticulata
ENSCSEG00000021519	-	80	47.170	ENSPREG00000001250	-	85	47.170	Poecilia_reticulata
ENSCSEG00000021519	-	91	38.830	ENSPREG00000020440	-	83	39.086	Poecilia_reticulata
ENSCSEG00000021519	-	82	41.885	ENSPNYG00000010004	-	85	40.889	Pundamilia_nyererei
ENSCSEG00000021519	-	84	38.785	ENSPNAG00000019899	-	89	40.376	Pygocentrus_nattereri
ENSCSEG00000021519	-	87	36.228	ENSPNAG00000013132	-	69	39.141	Pygocentrus_nattereri
ENSCSEG00000021519	-	86	38.938	ENSPNAG00000014932	-	80	37.824	Pygocentrus_nattereri
ENSCSEG00000021519	-	74	40.104	ENSPNAG00000025850	-	88	37.872	Pygocentrus_nattereri
ENSCSEG00000021519	-	83	44.186	ENSPNAG00000002097	-	92	48.458	Pygocentrus_nattereri
ENSCSEG00000021519	-	82	33.708	ENSSFOG00015002507	-	98	33.708	Scleropages_formosus
ENSCSEG00000021519	-	80	34.351	ENSSFOG00015002503	-	90	35.065	Scleropages_formosus
ENSCSEG00000021519	-	84	38.251	ENSSFOG00015002420	-	90	37.838	Scleropages_formosus
ENSCSEG00000021519	-	100	59.724	ENSSMAG00000012187	-	98	59.593	Scophthalmus_maximus
ENSCSEG00000021519	-	85	59.302	ENSSDUG00000022299	-	94	72.199	Seriola_dumerili
ENSCSEG00000021519	-	86	47.222	ENSSLDG00000009168	-	98	47.826	Seriola_lalandi_dorsalis
ENSCSEG00000021519	-	86	44.444	ENSSLDG00000010531	-	96	42.781	Seriola_lalandi_dorsalis
ENSCSEG00000021519	-	100	65.991	ENSSLDG00000005786	-	99	66.098	Seriola_lalandi_dorsalis
ENSCSEG00000021519	-	81	44.512	ENSSPAG00000015927	-	84	43.415	Stegastes_partitus
ENSCSEG00000021519	-	88	51.678	ENSSPAG00000017616	-	97	61.031	Stegastes_partitus
ENSCSEG00000021519	-	84	40.642	ENSTRUG00000018070	-	84	42.795	Takifugu_rubripes
ENSCSEG00000021519	-	83	60.317	ENSTRUG00000020422	-	82	56.696	Takifugu_rubripes
ENSCSEG00000021519	-	85	48.315	ENSTNIG00000004275	-	99	53.509	Tetraodon_nigroviridis
ENSCSEG00000021519	-	88	55.340	ENSTNIG00000004220	-	93	50.230	Tetraodon_nigroviridis
ENSCSEG00000021519	-	84	40.761	ENSXCOG00000009005	-	87	40.217	Xiphophorus_couchianus
ENSCSEG00000021519	-	76	49.057	ENSXCOG00000018421	-	97	40.000	Xiphophorus_couchianus
ENSCSEG00000021519	-	87	33.158	ENSXMAG00000023360	-	83	34.412	Xiphophorus_maculatus