EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000021529 (Gene tree)
Gene ID: 103385565
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 13079 bases
Position: chr10:20653614-20666692
Accession: 103385565
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033546	RNase_T	PF00929.24	1.6e-16	1	1
ENSCSEP00000033542	RNase_T	PF00929.24	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033976	-	5758	XM_008319495	ENSCSEP00000033542	1195 (aa)	XP_008317717	UPI00049608E4
ENSCSET00000033980	-	3495	-	ENSCSEP00000033546	1164 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000021529's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021529	pan2	100	90.050	ENSAPOG00000022955	pan2	100	90.050	Acanthochromis_polyacanthus
ENSCSEG00000021529	pan2	99	71.664	ENSAMEG00000003824	PAN2	100	71.440	Ailuropoda_melanoleuca
ENSCSEG00000021529	pan2	99	85.858	ENSACIG00000013079	pan2	99	85.858	Amphilophus_citrinellus
ENSCSEG00000021529	pan2	99	68.038	ENSACIG00000012858	PAN2	99	67.695	Amphilophus_citrinellus
ENSCSEG00000021529	pan2	100	90.381	ENSAOCG00000022334	pan2	100	90.381	Amphiprion_ocellaris
ENSCSEG00000021529	pan2	100	89.917	ENSAPEG00000022760	pan2	100	89.917	Amphiprion_percula
ENSCSEG00000021529	pan2	99	90.050	ENSATEG00000024030	pan2	100	90.050	Anabas_testudineus
ENSCSEG00000021529	pan2	94	73.164	ENSAPLG00000005195	PAN2	100	73.433	Anas_platyrhynchos
ENSCSEG00000021529	pan2	99	73.016	ENSACAG00000007067	PAN2	100	72.645	Anolis_carolinensis
ENSCSEG00000021529	pan2	99	71.582	ENSANAG00000036468	PAN2	100	71.358	Aotus_nancymaae
ENSCSEG00000021529	pan2	100	88.512	ENSACLG00000023674	pan2	100	88.678	Astatotilapia_calliptera
ENSCSEG00000021529	pan2	99	68.014	ENSACLG00000023821	pan2	99	68.014	Astatotilapia_calliptera
ENSCSEG00000021529	pan2	100	82.972	ENSAMXG00000005418	pan2	98	82.972	Astyanax_mexicanus
ENSCSEG00000021529	pan2	99	71.667	ENSBTAG00000004376	PAN2	100	71.440	Bos_taurus
ENSCSEG00000021529	pan2	99	71.334	ENSCJAG00000011141	PAN2	100	71.111	Callithrix_jacchus
ENSCSEG00000021529	pan2	99	71.667	ENSCAFG00000000119	PAN2	100	71.440	Canis_familiaris
ENSCSEG00000021529	pan2	99	71.298	ENSCAFG00020024865	PAN2	100	70.710	Canis_lupus_dingo
ENSCSEG00000021529	pan2	99	71.725	ENSCHIG00000026935	PAN2	100	70.891	Capra_hircus
ENSCSEG00000021529	pan2	99	71.227	ENSTSYG00000006927	PAN2	100	70.261	Carlito_syrichta
ENSCSEG00000021529	pan2	99	71.582	ENSCPOG00000014918	PAN2	100	71.195	Cavia_porcellus
ENSCSEG00000021529	pan2	99	71.417	ENSCCAG00000036637	PAN2	100	71.193	Cebus_capucinus
ENSCSEG00000021529	pan2	99	71.417	ENSCATG00000045076	PAN2	100	71.193	Cercocebus_atys
ENSCSEG00000021529	pan2	100	71.712	ENSCLAG00000011700	PAN2	100	71.277	Chinchilla_lanigera
ENSCSEG00000021529	pan2	99	71.239	ENSCSAG00000005173	PAN2	100	70.947	Chlorocebus_sabaeus
ENSCSEG00000021529	pan2	99	73.493	ENSCPBG00000014029	PAN2	100	73.223	Chrysemys_picta_bellii
ENSCSEG00000021529	pan2	91	45.510	ENSCSAVG00000003833	-	98	57.186	Ciona_savignyi
ENSCSEG00000021529	pan2	99	69.811	ENSCANG00000017798	PAN2	100	69.590	Colobus_angolensis_palliatus
ENSCSEG00000021529	pan2	99	72.143	ENSCGRG00001019707	Pan2	100	71.852	Cricetulus_griseus_chok1gshd
ENSCSEG00000021529	pan2	99	71.358	ENSCGRG00000009996	Pan2	100	70.915	Cricetulus_griseus_crigri
ENSCSEG00000021529	pan2	100	88.474	ENSCVAG00000010197	pan2	100	88.474	Cyprinodon_variegatus
ENSCSEG00000021529	pan2	100	82.601	ENSDARG00000074675	pan2	100	82.104	Danio_rerio
ENSCSEG00000021529	pan2	99	72.037	ENSDNOG00000010940	PAN2	100	71.535	Dasypus_novemcinctus
ENSCSEG00000021529	pan2	96	39.469	FBgn0033352	PAN2	98	39.019	Drosophila_melanogaster
ENSCSEG00000021529	pan2	76	77.005	ENSETEG00000012041	PAN2	81	78.075	Echinops_telfairi
ENSCSEG00000021529	pan2	98	53.605	ENSEBUG00000002773	pan2	99	53.333	Eptatretus_burgeri
ENSCSEG00000021529	pan2	99	73.220	ENSEASG00005005235	PAN2	99	73.220	Equus_asinus_asinus
ENSCSEG00000021529	pan2	99	71.917	ENSECAG00000019814	PAN2	100	71.605	Equus_caballus
ENSCSEG00000021529	pan2	99	84.036	ENSELUG00000024604	pan2	99	84.202	Esox_lucius
ENSCSEG00000021529	pan2	99	71.664	ENSFCAG00000012021	PAN2	100	71.440	Felis_catus
ENSCSEG00000021529	pan2	99	73.724	ENSFALG00000000464	PAN2	98	73.618	Ficedula_albicollis
ENSCSEG00000021529	pan2	99	71.582	ENSFDAG00000017104	PAN2	100	70.670	Fukomys_damarensis
ENSCSEG00000021529	pan2	90	89.693	ENSFHEG00000000157	pan2	97	89.693	Fundulus_heteroclitus
ENSCSEG00000021529	pan2	100	83.430	ENSGMOG00000007249	pan2	99	83.430	Gadus_morhua
ENSCSEG00000021529	pan2	99	73.942	ENSGALG00000031512	PAN2	100	73.802	Gallus_gallus
ENSCSEG00000021529	pan2	100	88.060	ENSGAFG00000000284	pan2	100	88.060	Gambusia_affinis
ENSCSEG00000021529	pan2	100	87.901	ENSGACG00000010722	pan2	99	88.395	Gasterosteus_aculeatus
ENSCSEG00000021529	pan2	99	72.915	ENSGAGG00000007868	PAN2	100	72.727	Gopherus_agassizii
ENSCSEG00000021529	pan2	99	71.334	ENSGGOG00000009115	PAN2	100	71.111	Gorilla_gorilla
ENSCSEG00000021529	pan2	100	88.806	ENSHBUG00000005234	pan2	100	88.972	Haplochromis_burtoni
ENSCSEG00000021529	pan2	99	71.085	ENSHGLG00000005647	PAN2	99	70.837	Heterocephalus_glaber_female
ENSCSEG00000021529	pan2	99	70.920	ENSHGLG00100014057	PAN2	99	70.340	Heterocephalus_glaber_male
ENSCSEG00000021529	pan2	100	86.446	ENSHCOG00000007920	pan2	100	86.446	Hippocampus_comes
ENSCSEG00000021529	pan2	100	82.479	ENSIPUG00000011065	PAN2	100	82.066	Ictalurus_punctatus
ENSCSEG00000021529	pan2	94	71.079	ENSSTOG00000015974	PAN2	100	70.804	Ictidomys_tridecemlineatus
ENSCSEG00000021529	pan2	99	71.500	ENSJJAG00000013044	Pan2	98	71.193	Jaculus_jaculus
ENSCSEG00000021529	pan2	100	87.977	ENSKMAG00000006192	pan2	100	87.977	Kryptolebias_marmoratus
ENSCSEG00000021529	pan2	93	91.253	ENSLBEG00000015763	pan2	97	91.253	Labrus_bergylta
ENSCSEG00000021529	pan2	99	66.613	ENSLACG00000018694	PAN2	100	66.291	Latimeria_chalumnae
ENSCSEG00000021529	pan2	100	82.222	ENSLOCG00000004333	pan2	99	82.058	Lepisosteus_oculatus
ENSCSEG00000021529	pan2	99	69.818	ENSLAFG00000014873	PAN2	100	69.369	Loxodonta_africana
ENSCSEG00000021529	pan2	99	71.252	ENSMFAG00000002293	PAN2	100	71.029	Macaca_fascicularis
ENSCSEG00000021529	pan2	99	71.252	ENSMMUG00000013482	PAN2	100	71.029	Macaca_mulatta
ENSCSEG00000021529	pan2	99	71.334	ENSMNEG00000033264	PAN2	100	71.111	Macaca_nemestrina
ENSCSEG00000021529	pan2	99	71.452	ENSMLEG00000037388	PAN2	100	71.193	Mandrillus_leucophaeus
ENSCSEG00000021529	pan2	99	89.212	ENSMAMG00000001624	pan2	100	89.212	Mastacembelus_armatus
ENSCSEG00000021529	pan2	97	70.097	ENSMZEG00005026472	pan2	99	68.893	Maylandia_zebra
ENSCSEG00000021529	pan2	100	88.512	ENSMZEG00005026462	pan2	100	88.678	Maylandia_zebra
ENSCSEG00000021529	pan2	96	73.895	ENSMGAG00000001439	PAN2	99	74.335	Meleagris_gallopavo
ENSCSEG00000021529	pan2	99	71.535	ENSMAUG00000012602	Pan2	99	71.417	Mesocricetus_auratus
ENSCSEG00000021529	pan2	99	71.417	ENSMICG00000017661	PAN2	100	71.193	Microcebus_murinus
ENSCSEG00000021529	pan2	99	71.870	ENSMOCG00000007191	Pan2	100	71.440	Microtus_ochrogaster
ENSCSEG00000021529	pan2	99	88.619	ENSMMOG00000009313	pan2	97	88.619	Mola_mola
ENSCSEG00000021529	pan2	99	88.751	ENSMALG00000013377	pan2	100	88.751	Monopterus_albus
ENSCSEG00000021529	pan2	99	71.144	MGP_CAROLIEiJ_G0015930	Pan2	100	70.540	Mus_caroli
ENSCSEG00000021529	pan2	99	71.679	ENSMUSG00000005682	Pan2	100	71.040	Mus_musculus
ENSCSEG00000021529	pan2	99	71.061	MGP_PahariEiJ_G0031154	Pan2	100	70.540	Mus_pahari
ENSCSEG00000021529	pan2	99	71.846	MGP_SPRETEiJ_G0016755	Pan2	100	71.476	Mus_spretus
ENSCSEG00000021529	pan2	99	71.833	ENSMPUG00000001383	PAN2	100	71.605	Mustela_putorius_furo
ENSCSEG00000021529	pan2	99	71.687	ENSMLUG00000006737	PAN2	100	71.523	Myotis_lucifugus
ENSCSEG00000021529	pan2	99	71.642	ENSNGAG00000007930	Pan2	100	71.358	Nannospalax_galili
ENSCSEG00000021529	pan2	100	85.272	ENSNBRG00000006585	pan2	100	85.356	Neolamprologus_brichardi
ENSCSEG00000021529	pan2	99	67.488	ENSNLEG00000017499	PAN2	99	70.081	Nomascus_leucogenys
ENSCSEG00000021529	pan2	99	73.378	ENSMEUG00000010125	PAN2	100	73.207	Notamacropus_eugenii
ENSCSEG00000021529	pan2	99	71.286	ENSOPRG00000001468	PAN2	100	71.018	Ochotona_princeps
ENSCSEG00000021529	pan2	99	70.748	ENSODEG00000007203	PAN2	100	70.612	Octodon_degus
ENSCSEG00000021529	pan2	99	87.011	ENSONIG00000016732	pan2	99	87.011	Oreochromis_niloticus
ENSCSEG00000021529	pan2	81	63.609	ENSOANG00000005151	PAN2	99	63.100	Ornithorhynchus_anatinus
ENSCSEG00000021529	pan2	99	71.606	ENSOCUG00000007227	PAN2	100	71.440	Oryctolagus_cuniculus
ENSCSEG00000021529	pan2	99	86.733	ENSORLG00000015195	pan2	100	86.650	Oryzias_latipes
ENSCSEG00000021529	pan2	99	86.733	ENSORLG00020000277	pan2	100	86.650	Oryzias_latipes_hni
ENSCSEG00000021529	pan2	99	86.401	ENSORLG00015005193	pan2	100	86.318	Oryzias_latipes_hsok
ENSCSEG00000021529	pan2	99	86.982	ENSOMEG00000022087	pan2	100	86.899	Oryzias_melastigma
ENSCSEG00000021529	pan2	99	70.992	ENSOGAG00000030620	PAN2	100	70.449	Otolemur_garnettii
ENSCSEG00000021529	pan2	99	71.664	ENSOARG00000009379	PAN2	100	71.440	Ovis_aries
ENSCSEG00000021529	pan2	99	71.334	ENSPPAG00000001208	PAN2	100	71.111	Pan_paniscus
ENSCSEG00000021529	pan2	99	71.664	ENSPPRG00000021586	PAN2	100	71.440	Panthera_pardus
ENSCSEG00000021529	pan2	99	67.951	ENSPTIG00000012494	PAN2	100	67.731	Panthera_tigris_altaica
ENSCSEG00000021529	pan2	99	71.334	ENSPTRG00000052054	PAN2	100	71.111	Pan_troglodytes
ENSCSEG00000021529	pan2	92	72.401	ENSPANG00000018906	PAN2	100	72.158	Papio_anubis
ENSCSEG00000021529	pan2	100	81.653	ENSPKIG00000003973	pan2	100	81.322	Paramormyrops_kingsleyae
ENSCSEG00000021529	pan2	99	72.512	ENSPSIG00000003267	PAN2	100	72.327	Pelodiscus_sinensis
ENSCSEG00000021529	pan2	99	87.190	ENSPMGG00000023186	pan2	99	87.105	Periophthalmus_magnuspinnatus
ENSCSEG00000021529	pan2	99	71.251	ENSPEMG00000018505	Pan2	100	70.833	Peromyscus_maniculatus_bairdii
ENSCSEG00000021529	pan2	90	63.784	ENSPMAG00000004731	pan2	100	63.826	Petromyzon_marinus
ENSCSEG00000021529	pan2	99	73.417	ENSPCIG00000024643	PAN2	100	73.080	Phascolarctos_cinereus
ENSCSEG00000021529	pan2	100	88.557	ENSPFOG00000008392	pan2	100	88.557	Poecilia_formosa
ENSCSEG00000021529	pan2	100	88.474	ENSPLAG00000009198	pan2	100	88.474	Poecilia_latipinna
ENSCSEG00000021529	pan2	100	88.474	ENSPMEG00000001484	pan2	100	88.474	Poecilia_mexicana
ENSCSEG00000021529	pan2	100	88.723	ENSPREG00000000900	pan2	100	88.723	Poecilia_reticulata
ENSCSEG00000021529	pan2	90	76.489	ENSPPYG00000004656	PAN2	99	76.863	Pongo_abelii
ENSCSEG00000021529	pan2	92	72.597	ENSPCAG00000011047	PAN2	99	72.579	Procavia_capensis
ENSCSEG00000021529	pan2	99	71.750	ENSPCOG00000018263	PAN2	100	71.276	Propithecus_coquereli
ENSCSEG00000021529	pan2	94	69.153	ENSPVAG00000007591	PAN2	94	68.851	Pteropus_vampyrus
ENSCSEG00000021529	pan2	99	88.880	ENSPNYG00000002629	pan2	99	89.047	Pundamilia_nyererei
ENSCSEG00000021529	pan2	100	84.711	ENSPNAG00000027140	pan2	100	84.380	Pygocentrus_nattereri
ENSCSEG00000021529	pan2	99	71.763	ENSRNOG00000032441	Pan2	100	71.311	Rattus_norvegicus
ENSCSEG00000021529	pan2	99	71.250	ENSRBIG00000029591	PAN2	100	70.947	Rhinopithecus_bieti
ENSCSEG00000021529	pan2	99	71.226	ENSRROG00000041950	PAN2	100	70.947	Rhinopithecus_roxellana
ENSCSEG00000021529	pan2	99	71.583	ENSSBOG00000027343	PAN2	100	71.193	Saimiri_boliviensis_boliviensis
ENSCSEG00000021529	pan2	92	73.136	ENSSHAG00000000122	PAN2	99	74.337	Sarcophilus_harrisii
ENSCSEG00000021529	pan2	100	82.562	ENSSFOG00015017740	pan2	100	82.231	Scleropages_formosus
ENSCSEG00000021529	pan2	100	88.366	ENSSMAG00000020901	pan2	100	88.531	Scophthalmus_maximus
ENSCSEG00000021529	pan2	100	90.165	ENSSDUG00000001840	pan2	100	90.165	Seriola_dumerili
ENSCSEG00000021529	pan2	100	90.464	ENSSLDG00000013866	pan2	100	90.464	Seriola_lalandi_dorsalis
ENSCSEG00000021529	pan2	92	71.299	ENSSARG00000013350	PAN2	92	71.299	Sorex_araneus
ENSCSEG00000021529	pan2	92	74.288	ENSSPUG00000004270	PAN2	99	74.087	Sphenodon_punctatus
ENSCSEG00000021529	pan2	100	90.165	ENSSPAG00000019970	pan2	100	90.165	Stegastes_partitus
ENSCSEG00000021529	pan2	99	71.500	ENSSSCG00000000393	PAN2	100	71.276	Sus_scrofa
ENSCSEG00000021529	pan2	100	87.521	ENSTRUG00000014260	pan2	100	87.521	Takifugu_rubripes
ENSCSEG00000021529	pan2	100	87.769	ENSTNIG00000012537	pan2	99	87.769	Tetraodon_nigroviridis
ENSCSEG00000021529	pan2	80	69.404	ENSTTRG00000007150	PAN2	80	69.314	Tursiops_truncatus
ENSCSEG00000021529	pan2	99	72.513	ENSUAMG00000026522	PAN2	99	72.513	Ursus_americanus
ENSCSEG00000021529	pan2	99	71.055	ENSUMAG00000017020	PAN2	100	70.833	Ursus_maritimus
ENSCSEG00000021529	pan2	75	92.105	ENSVPAG00000007309	PAN2	80	92.105	Vicugna_pacos
ENSCSEG00000021529	pan2	99	71.750	ENSVVUG00000021878	PAN2	100	71.523	Vulpes_vulpes
ENSCSEG00000021529	pan2	99	71.013	ENSXETG00000009434	pan2	100	71.801	Xenopus_tropicalis
ENSCSEG00000021529	pan2	99	83.948	ENSXCOG00000014391	pan2	99	83.948	Xiphophorus_couchianus
ENSCSEG00000021529	pan2	100	88.723	ENSXMAG00000011661	pan2	100	88.723	Xiphophorus_maculatus