EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000021531 (Gene tree)
Gene ID: 103385564
Gene Symbol: pym1
Alias: wibg|zgc:65891|zgc:77281
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 10378 bases
Position: chr10:20665845-20676222
Accession: 103385564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033547	Mago-bind	PF09282.10	2.9e-13	1	1
ENSCSEP00000033548	Mago-bind	PF09282.10	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000033982	-	1373	XM_008319493	ENSCSEP00000033548	201 (aa)	XP_008317715	UPI000496780B
ENSCSET00000033981	-	1373	-	ENSCSEP00000033547	201 (aa)	-	UPI000496780B

Gene Model

Click here to download ENSCSEG00000021531's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03013	RNA transport	KEGG
csem03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021531	pym1	94	58.128	ENSG00000170473	PYM1	94	55.882	Homo_sapiens
ENSCSEG00000021531	pym1	100	75.000	ENSAPOG00000023045	pym1	100	72.430	Acanthochromis_polyacanthus
ENSCSEG00000021531	pym1	91	55.102	ENSAMEG00000003091	PYM1	91	52.792	Ailuropoda_melanoleuca
ENSCSEG00000021531	pym1	100	79.439	ENSACIG00000012769	pym1	100	79.439	Amphilophus_citrinellus
ENSCSEG00000021531	pym1	100	76.526	ENSAOCG00000021358	pym1	100	74.178	Amphiprion_ocellaris
ENSCSEG00000021531	pym1	100	76.526	ENSAPEG00000022679	pym1	100	74.178	Amphiprion_percula
ENSCSEG00000021531	pym1	100	73.113	ENSATEG00000024022	pym1	94	73.500	Anabas_testudineus
ENSCSEG00000021531	pym1	94	58.373	ENSACAG00000005714	PYM1	94	58.373	Anolis_carolinensis
ENSCSEG00000021531	pym1	94	58.000	ENSANAG00000036967	PYM1	94	55.000	Aotus_nancymaae
ENSCSEG00000021531	pym1	99	62.439	ENSAMXG00000007650	pym1	94	67.347	Astyanax_mexicanus
ENSCSEG00000021531	pym1	94	58.824	ENSBTAG00000031146	PYM1	94	55.882	Bos_taurus
ENSCSEG00000021531	pym1	94	58.128	ENSCJAG00000041077	PYM1	94	55.882	Callithrix_jacchus
ENSCSEG00000021531	pym1	94	59.113	ENSCAFG00000000076	PYM1	94	56.158	Canis_familiaris
ENSCSEG00000021531	pym1	94	59.113	ENSCAFG00020026099	PYM1	94	56.158	Canis_lupus_dingo
ENSCSEG00000021531	pym1	94	58.824	ENSCHIG00000026207	PYM1	94	55.882	Capra_hircus
ENSCSEG00000021531	pym1	94	56.158	ENSTSYG00000000787	PYM1	94	53.202	Carlito_syrichta
ENSCSEG00000021531	pym1	89	55.729	ENSCAPG00000010374	PYM1	94	53.368	Cavia_aperea
ENSCSEG00000021531	pym1	94	57.353	ENSCPOG00000031546	PYM1	94	54.412	Cavia_porcellus
ENSCSEG00000021531	pym1	94	58.128	ENSCCAG00000026187	PYM1	94	55.882	Cebus_capucinus
ENSCSEG00000021531	pym1	94	58.621	ENSCATG00000018801	PYM1	94	56.373	Cercocebus_atys
ENSCSEG00000021531	pym1	94	56.650	ENSCLAG00000007964	PYM1	94	54.545	Chinchilla_lanigera
ENSCSEG00000021531	pym1	89	58.031	ENSCSAG00000005291	PYM1	92	54.922	Chlorocebus_sabaeus
ENSCSEG00000021531	pym1	98	39.623	ENSCING00000006448	-	92	37.824	Ciona_intestinalis
ENSCSEG00000021531	pym1	98	37.615	ENSCSAVG00000009805	-	87	36.275	Ciona_savignyi
ENSCSEG00000021531	pym1	98	53.623	ENSCANG00000019757	-	85	54.315	Colobus_angolensis_palliatus
ENSCSEG00000021531	pym1	94	58.621	ENSCANG00000020338	-	94	56.373	Colobus_angolensis_palliatus
ENSCSEG00000021531	pym1	94	56.000	ENSCGRG00001018051	-	94	59.375	Cricetulus_griseus_chok1gshd
ENSCSEG00000021531	pym1	88	52.542	ENSCGRG00001004231	-	89	52.717	Cricetulus_griseus_chok1gshd
ENSCSEG00000021531	pym1	88	52.542	ENSCGRG00000018933	-	89	52.717	Cricetulus_griseus_crigri
ENSCSEG00000021531	pym1	94	56.000	ENSCGRG00000012495	-	94	59.375	Cricetulus_griseus_crigri
ENSCSEG00000021531	pym1	99	72.596	ENSCVAG00000017360	pym1	88	72.115	Cyprinodon_variegatus
ENSCSEG00000021531	pym1	100	58.209	ENSDARG00000046024	pym1	94	58.201	Danio_rerio
ENSCSEG00000021531	pym1	94	57.143	ENSDNOG00000048414	PYM1	86	53.883	Dasypus_novemcinctus
ENSCSEG00000021531	pym1	94	57.843	ENSDORG00000029448	Pym1	94	54.902	Dipodomys_ordii
ENSCSEG00000021531	pym1	89	55.191	ENSETEG00000004461	-	94	55.191	Echinops_telfairi
ENSCSEG00000021531	pym1	92	52.308	ENSEASG00005002271	PYM1	81	51.337	Equus_asinus_asinus
ENSCSEG00000021531	pym1	94	56.158	ENSECAG00000011870	PYM1	94	53.202	Equus_caballus
ENSCSEG00000021531	pym1	100	65.550	ENSELUG00000024250	pym1	94	63.452	Esox_lucius
ENSCSEG00000021531	pym1	94	57.619	ENSFCAG00000013967	PYM1	94	55.665	Felis_catus
ENSCSEG00000021531	pym1	94	58.000	ENSFDAG00000006314	PYM1	94	55.000	Fukomys_damarensis
ENSCSEG00000021531	pym1	94	72.683	ENSFHEG00000005884	pym1	100	70.968	Fundulus_heteroclitus
ENSCSEG00000021531	pym1	94	64.249	ENSGMOG00000007239	pym1	93	62.176	Gadus_morhua
ENSCSEG00000021531	pym1	94	62.051	ENSGALG00000046169	PYM1	94	60.804	Gallus_gallus
ENSCSEG00000021531	pym1	100	70.698	ENSGAFG00000003280	pym1	100	73.023	Gambusia_affinis
ENSCSEG00000021531	pym1	100	67.464	ENSGACG00000010703	pym1	94	68.020	Gasterosteus_aculeatus
ENSCSEG00000021531	pym1	90	60.914	ENSGAGG00000001973	PYM1	84	60.406	Gopherus_agassizii
ENSCSEG00000021531	pym1	94	56.311	ENSGGOG00000043246	PYM1	94	53.398	Gorilla_gorilla
ENSCSEG00000021531	pym1	100	78.155	ENSHBUG00000012719	pym1	100	76.526	Haplochromis_burtoni
ENSCSEG00000021531	pym1	94	57.635	ENSHGLG00000017155	PYM1	94	54.680	Heterocephalus_glaber_female
ENSCSEG00000021531	pym1	94	57.635	ENSHGLG00100015341	PYM1	94	54.680	Heterocephalus_glaber_male
ENSCSEG00000021531	pym1	100	68.269	ENSHCOG00000007987	pym1	81	66.667	Hippocampus_comes
ENSCSEG00000021531	pym1	99	67.317	ENSIPUG00000005975	wibga	94	69.072	Ictalurus_punctatus
ENSCSEG00000021531	pym1	94	58.500	ENSSTOG00000014206	PYM1	94	55.500	Ictidomys_tridecemlineatus
ENSCSEG00000021531	pym1	94	56.345	ENSJJAG00000013338	Pym1	94	53.299	Jaculus_jaculus
ENSCSEG00000021531	pym1	100	71.493	ENSKMAG00000006351	pym1	100	71.493	Kryptolebias_marmoratus
ENSCSEG00000021531	pym1	100	75.355	ENSLBEG00000015707	pym1	100	72.986	Labrus_bergylta
ENSCSEG00000021531	pym1	90	60.606	ENSLACG00000014398	PYM1	89	59.898	Latimeria_chalumnae
ENSCSEG00000021531	pym1	94	59.606	ENSLAFG00000002369	PYM1	94	56.650	Loxodonta_africana
ENSCSEG00000021531	pym1	94	58.621	ENSMFAG00000003048	PYM1	94	56.373	Macaca_fascicularis
ENSCSEG00000021531	pym1	94	58.621	ENSMMUG00000011002	PYM1	94	56.373	Macaca_mulatta
ENSCSEG00000021531	pym1	94	58.621	ENSMNEG00000034677	PYM1	94	56.373	Macaca_nemestrina
ENSCSEG00000021531	pym1	94	58.621	ENSMLEG00000007971	PYM1	94	56.373	Mandrillus_leucophaeus
ENSCSEG00000021531	pym1	100	69.091	ENSMAMG00000001588	pym1	94	69.231	Mastacembelus_armatus
ENSCSEG00000021531	pym1	100	77.670	ENSMZEG00005026458	pym1	100	76.056	Maylandia_zebra
ENSCSEG00000021531	pym1	94	56.500	ENSMAUG00000007318	Pym1	94	59.375	Mesocricetus_auratus
ENSCSEG00000021531	pym1	94	59.406	ENSMICG00000032962	PYM1	94	55.172	Microcebus_murinus
ENSCSEG00000021531	pym1	94	55.497	ENSMOCG00000010208	Pym1	94	57.068	Microtus_ochrogaster
ENSCSEG00000021531	pym1	100	69.608	ENSMMOG00000009301	pym1	100	67.647	Mola_mola
ENSCSEG00000021531	pym1	100	75.117	ENSMALG00000013496	pym1	100	72.300	Monopterus_albus
ENSCSEG00000021531	pym1	93	57.868	MGP_CAROLIEiJ_G0015953	Pym1	93	57.868	Mus_caroli
ENSCSEG00000021531	pym1	93	56.853	ENSMUSG00000064030	Pym1	94	56.000	Mus_musculus
ENSCSEG00000021531	pym1	94	58.376	MGP_PahariEiJ_G0031131	Pym1	93	58.673	Mus_pahari
ENSCSEG00000021531	pym1	93	58.201	MGP_SPRETEiJ_G0016778	Pym1	94	56.000	Mus_spretus
ENSCSEG00000021531	pym1	94	58.128	ENSMPUG00000000931	PYM1	94	55.172	Mustela_putorius_furo
ENSCSEG00000021531	pym1	93	55.500	ENSMLUG00000003586	PYM1	93	52.217	Myotis_lucifugus
ENSCSEG00000021531	pym1	90	56.842	ENSNGAG00000019207	Pym1	88	53.684	Nannospalax_galili
ENSCSEG00000021531	pym1	100	77.934	ENSNBRG00000006951	pym1	100	76.995	Neolamprologus_brichardi
ENSCSEG00000021531	pym1	94	58.128	ENSNLEG00000017588	PYM1	94	55.882	Nomascus_leucogenys
ENSCSEG00000021531	pym1	88	55.670	ENSMEUG00000001017	PYM1	92	52.406	Notamacropus_eugenii
ENSCSEG00000021531	pym1	92	53.398	ENSOPRG00000007797	PYM1	91	50.485	Ochotona_princeps
ENSCSEG00000021531	pym1	94	57.635	ENSODEG00000004289	PYM1	94	54.680	Octodon_degus
ENSCSEG00000021531	pym1	100	75.000	ENSONIG00000016740	pym1	100	74.074	Oreochromis_niloticus
ENSCSEG00000021531	pym1	89	57.292	ENSOCUG00000025969	PYM1	81	54.167	Oryctolagus_cuniculus
ENSCSEG00000021531	pym1	100	74.762	ENSORLG00000030592	pym1	94	71.717	Oryzias_latipes
ENSCSEG00000021531	pym1	100	73.810	ENSORLG00020011264	pym1	94	73.232	Oryzias_latipes_hni
ENSCSEG00000021531	pym1	100	75.238	ENSORLG00015005287	pym1	94	71.717	Oryzias_latipes_hsok
ENSCSEG00000021531	pym1	100	75.481	ENSOMEG00000022250	pym1	94	73.980	Oryzias_melastigma
ENSCSEG00000021531	pym1	89	58.549	ENSOGAG00000007038	PYM1	88	55.440	Otolemur_garnettii
ENSCSEG00000021531	pym1	94	58.824	ENSOARG00000010856	PYM1	94	55.882	Ovis_aries
ENSCSEG00000021531	pym1	94	58.128	ENSPPAG00000043630	PYM1	94	55.882	Pan_paniscus
ENSCSEG00000021531	pym1	94	59.048	ENSPPRG00000013243	PYM1	94	56.190	Panthera_pardus
ENSCSEG00000021531	pym1	94	59.048	ENSPTIG00000017380	PYM1	94	56.190	Panthera_tigris_altaica
ENSCSEG00000021531	pym1	94	58.128	ENSPTRG00000005067	PYM1	94	55.882	Pan_troglodytes
ENSCSEG00000021531	pym1	94	58.621	ENSPANG00000009562	PYM1	94	56.373	Papio_anubis
ENSCSEG00000021531	pym1	99	68.056	ENSPKIG00000006301	pym1	94	66.000	Paramormyrops_kingsleyae
ENSCSEG00000021531	pym1	94	57.843	ENSPSIG00000003043	PYM1	94	55.714	Pelodiscus_sinensis
ENSCSEG00000021531	pym1	99	69.903	ENSPMGG00000023161	pym1	94	68.912	Periophthalmus_magnuspinnatus
ENSCSEG00000021531	pym1	94	54.589	ENSPEMG00000009372	Pym1	94	57.000	Peromyscus_maniculatus_bairdii
ENSCSEG00000021531	pym1	88	56.667	ENSPCIG00000024658	PYM1	86	55.155	Phascolarctos_cinereus
ENSCSEG00000021531	pym1	100	73.364	ENSPFOG00000008193	pym1	100	70.892	Poecilia_formosa
ENSCSEG00000021531	pym1	100	71.628	ENSPLAG00000009228	pym1	100	71.163	Poecilia_latipinna
ENSCSEG00000021531	pym1	100	71.163	ENSPMEG00000001505	pym1	100	70.698	Poecilia_mexicana
ENSCSEG00000021531	pym1	90	55.051	ENSPPYG00000004635	PYM1	92	52.041	Pongo_abelii
ENSCSEG00000021531	pym1	94	58.621	ENSPCOG00000019706	PYM1	94	55.665	Propithecus_coquereli
ENSCSEG00000021531	pym1	90	57.216	ENSPVAG00000011437	PYM1	92	54.404	Pteropus_vampyrus
ENSCSEG00000021531	pym1	100	76.214	ENSPNYG00000012871	pym1	100	75.117	Pundamilia_nyererei
ENSCSEG00000021531	pym1	99	67.150	ENSPNAG00000018833	pym1	94	68.182	Pygocentrus_nattereri
ENSCSEG00000021531	pym1	94	54.040	ENSRNOG00000058130	Pym1	91	57.436	Rattus_norvegicus
ENSCSEG00000021531	pym1	94	55.721	ENSRBIG00000033362	PYM1	94	55.224	Rhinopithecus_bieti
ENSCSEG00000021531	pym1	94	58.621	ENSRROG00000043620	PYM1	94	56.373	Rhinopithecus_roxellana
ENSCSEG00000021531	pym1	94	58.128	ENSSBOG00000029393	PYM1	94	55.882	Saimiri_boliviensis_boliviensis
ENSCSEG00000021531	pym1	93	57.576	ENSSHAG00000008280	PYM1	93	54.040	Sarcophilus_harrisii
ENSCSEG00000021531	pym1	100	65.566	ENSSFOG00015021475	pym1	100	66.047	Scleropages_formosus
ENSCSEG00000021531	pym1	100	74.519	ENSSMAG00000020912	pym1	94	72.959	Scophthalmus_maximus
ENSCSEG00000021531	pym1	100	74.537	ENSSDUG00000001807	pym1	100	74.074	Seriola_dumerili
ENSCSEG00000021531	pym1	100	73.934	ENSSLDG00000013730	pym1	100	73.460	Seriola_lalandi_dorsalis
ENSCSEG00000021531	pym1	89	55.208	ENSSARG00000009569	PYM1	94	54.497	Sorex_araneus
ENSCSEG00000021531	pym1	91	57.436	ENSSPUG00000015059	PYM1	91	54.639	Sphenodon_punctatus
ENSCSEG00000021531	pym1	100	74.654	ENSSPAG00000020100	pym1	94	73.171	Stegastes_partitus
ENSCSEG00000021531	pym1	94	58.500	ENSSSCG00000040825	PYM1	94	55.500	Sus_scrofa
ENSCSEG00000021531	pym1	99	71.292	ENSTRUG00000021367	pym1	94	70.918	Takifugu_rubripes
ENSCSEG00000021531	pym1	100	65.238	ENSTNIG00000012534	pym1	93	71.429	Tetraodon_nigroviridis
ENSCSEG00000021531	pym1	88	55.263	ENSTBEG00000004208	PYM1	92	52.105	Tupaia_belangeri
ENSCSEG00000021531	pym1	90	57.216	ENSTTRG00000014971	PYM1	92	55.670	Tursiops_truncatus
ENSCSEG00000021531	pym1	94	57.843	ENSUAMG00000014521	PYM1	94	54.902	Ursus_americanus
ENSCSEG00000021531	pym1	88	55.789	ENSUMAG00000016241	PYM1	80	53.439	Ursus_maritimus
ENSCSEG00000021531	pym1	94	57.282	ENSVVUG00000022749	PYM1	94	54.369	Vulpes_vulpes
ENSCSEG00000021531	pym1	94	62.051	ENSXETG00000021850	pym1	94	61.658	Xenopus_tropicalis
ENSCSEG00000021531	pym1	100	70.233	ENSXMAG00000011649	pym1	100	70.233	Xiphophorus_maculatus