EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000021542 (Gene tree)
Gene ID: 103385612
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: transcriptional repressor scratch 1-like
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Minus strand
Length: 9120 bases
Position: chr10:20760990-20770109
Accession: 103385612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033568	zf-C2H2	PF00096.26	1.5e-25	1	4
ENSCSEP00000033568	zf-C2H2	PF00096.26	1.5e-25	2	4
ENSCSEP00000033568	zf-C2H2	PF00096.26	1.5e-25	3	4
ENSCSEP00000033568	zf-C2H2	PF00096.26	1.5e-25	4	4
ENSCSEP00000033568	zf-met	PF12874.7	7.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000034002	-	5545	XM_008319545	ENSCSEP00000033568	313 (aa)	XP_008317767	UPI0004982007

Gene Model

Click here to download ENSCSEG00000021542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000021542	scrt2	96	67.657	ENSCSEG00000008596	scrt1b	96	66.997
ENSCSEG00000021542	scrt2	51	36.620	ENSCSEG00000010423	-	57	36.620
ENSCSEG00000021542	scrt2	97	60.443	ENSCSEG00000014892	-	97	60.443
ENSCSEG00000021542	scrt2	56	30.882	ENSCSEG00000005491	-	56	38.750
ENSCSEG00000021542	scrt2	51	38.235	ENSCSEG00000004273	-	70	38.235
ENSCSEG00000021542	scrt2	62	35.606	ENSCSEG00000001748	-	97	34.507
ENSCSEG00000021542	scrt2	67	46.667	ENSCSEG00000011586	znf236	70	35.897
ENSCSEG00000021542	scrt2	57	36.184	ENSCSEG00000019979	prdm5	66	37.681
ENSCSEG00000021542	scrt2	53	33.333	ENSCSEG00000013879	znf319b	59	40.196
ENSCSEG00000021542	scrt2	53	34.965	ENSCSEG00000005983	-	91	34.965
ENSCSEG00000021542	scrt2	58	31.522	ENSCSEG00000010453	-	58	36.496
ENSCSEG00000021542	scrt2	57	44.872	ENSCSEG00000005935	ZNF319	61	44.872
ENSCSEG00000021542	scrt2	51	37.594	ENSCSEG00000013398	-	84	37.594
ENSCSEG00000021542	scrt2	54	34.091	ENSCSEG00000005974	-	82	35.200
ENSCSEG00000021542	scrt2	53	40.602	ENSCSEG00000020730	-	80	40.602
ENSCSEG00000021542	scrt2	64	38.053	ENSCSEG00000008502	-	69	38.053
ENSCSEG00000021542	scrt2	50	40.594	ENSCSEG00000001168	-	71	40.594
ENSCSEG00000021542	scrt2	52	35.664	ENSCSEG00000004721	-	55	36.842
ENSCSEG00000021542	scrt2	50	33.553	ENSCSEG00000017606	zbtb47b	75	33.553
ENSCSEG00000021542	scrt2	53	38.710	ENSCSEG00000018535	-	84	38.710
ENSCSEG00000021542	scrt2	52	38.462	ENSCSEG00000004348	-	80	38.462
ENSCSEG00000021542	scrt2	51	40.541	ENSCSEG00000020696	-	90	36.364
ENSCSEG00000021542	scrt2	54	38.636	ENSCSEG00000008903	-	72	38.636
ENSCSEG00000021542	scrt2	51	38.462	ENSCSEG00000004210	-	96	38.462
ENSCSEG00000021542	scrt2	51	33.813	ENSCSEG00000010264	-	80	33.813
ENSCSEG00000021542	scrt2	75	43.243	ENSCSEG00000003757	-	76	43.243

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021542	scrt2	100	93.417	ENSAPOG00000003680	scrt2	100	93.417	Acanthochromis_polyacanthus
ENSCSEG00000021542	scrt2	96	66.997	ENSAPOG00000009279	scrt1b	96	66.997	Acanthochromis_polyacanthus
ENSCSEG00000021542	scrt2	97	62.215	ENSAPOG00000015197	-	97	62.215	Acanthochromis_polyacanthus
ENSCSEG00000021542	scrt2	96	64.686	ENSACIG00000013613	scrt1b	96	64.686	Amphilophus_citrinellus
ENSCSEG00000021542	scrt2	100	62.963	ENSACIG00000001296	-	100	62.883	Amphilophus_citrinellus
ENSCSEG00000021542	scrt2	97	61.146	ENSACIG00000006586	-	97	61.146	Amphilophus_citrinellus
ENSCSEG00000021542	scrt2	100	79.624	ENSACIG00000012604	scrt2	100	79.624	Amphilophus_citrinellus
ENSCSEG00000021542	scrt2	100	93.417	ENSAOCG00000021557	scrt2	100	93.417	Amphiprion_ocellaris
ENSCSEG00000021542	scrt2	96	66.997	ENSAOCG00000003910	scrt1b	96	66.997	Amphiprion_ocellaris
ENSCSEG00000021542	scrt2	97	61.146	ENSAOCG00000023304	-	97	61.146	Amphiprion_ocellaris
ENSCSEG00000021542	scrt2	100	93.417	ENSAPEG00000022558	scrt2	100	93.417	Amphiprion_percula
ENSCSEG00000021542	scrt2	97	61.146	ENSAPEG00000005677	-	97	61.146	Amphiprion_percula
ENSCSEG00000021542	scrt2	96	66.997	ENSAPEG00000000869	scrt1b	96	66.997	Amphiprion_percula
ENSCSEG00000021542	scrt2	97	62.295	ENSATEG00000011660	-	97	62.295	Anabas_testudineus
ENSCSEG00000021542	scrt2	100	62.654	ENSATEG00000003195	-	100	62.654	Anabas_testudineus
ENSCSEG00000021542	scrt2	96	66.667	ENSATEG00000002302	scrt1b	96	66.667	Anabas_testudineus
ENSCSEG00000021542	scrt2	100	91.223	ENSATEG00000023998	scrt2	100	91.223	Anabas_testudineus
ENSCSEG00000021542	scrt2	75	70.638	ENSACAG00000016109	SCRT2	95	69.787	Anolis_carolinensis
ENSCSEG00000021542	scrt2	96	66.997	ENSACLG00000007162	scrt1b	96	66.997	Astatotilapia_calliptera
ENSCSEG00000021542	scrt2	97	61.006	ENSACLG00000012046	-	97	61.006	Astatotilapia_calliptera
ENSCSEG00000021542	scrt2	97	65.902	ENSAMXG00000042624	SCRT1	98	65.902	Astyanax_mexicanus
ENSCSEG00000021542	scrt2	90	76.842	ENSAMXG00000034158	scrt2	97	76.842	Astyanax_mexicanus
ENSCSEG00000021542	scrt2	97	65.686	ENSAMXG00000038085	scrt1a	97	65.686	Astyanax_mexicanus
ENSCSEG00000021542	scrt2	58	56.111	WBGene00000468	ces-1	50	66.912	Caenorhabditis_elegans
ENSCSEG00000021542	scrt2	97	65.789	ENSCPBG00000018899	SCRT1	97	64.935	Chrysemys_picta_bellii
ENSCSEG00000021542	scrt2	88	59.498	ENSCPBG00000027613	SCRT2	100	61.649	Chrysemys_picta_bellii
ENSCSEG00000021542	scrt2	99	60.681	ENSCVAG00000003190	-	100	60.681	Cyprinodon_variegatus
ENSCSEG00000021542	scrt2	96	66.997	ENSCVAG00000009561	scrt1b	96	66.997	Cyprinodon_variegatus
ENSCSEG00000021542	scrt2	100	91.536	ENSCVAG00000021038	scrt2	100	91.536	Cyprinodon_variegatus
ENSCSEG00000021542	scrt2	97	66.007	ENSDARG00000100821	scrt1a	97	66.007	Danio_rerio
ENSCSEG00000021542	scrt2	97	67.327	ENSDARG00000040214	scrt1b	97	66.667	Danio_rerio
ENSCSEG00000021542	scrt2	99	84.735	ENSELUG00000023883	scrt2	99	85.670	Esox_lucius
ENSCSEG00000021542	scrt2	97	66.337	ENSELUG00000005435	scrt1b	96	66.337	Esox_lucius
ENSCSEG00000021542	scrt2	96	67.219	ENSELUG00000022228	scrt1a	96	67.219	Esox_lucius
ENSCSEG00000021542	scrt2	82	63.813	ENSFALG00000005718	SCRT2	97	67.315	Ficedula_albicollis
ENSCSEG00000021542	scrt2	100	82.132	ENSFHEG00000005732	scrt2	100	82.132	Fundulus_heteroclitus
ENSCSEG00000021542	scrt2	96	66.337	ENSFHEG00000014820	scrt1b	96	66.337	Fundulus_heteroclitus
ENSCSEG00000021542	scrt2	97	62.102	ENSFHEG00000009794	-	97	62.102	Fundulus_heteroclitus
ENSCSEG00000021542	scrt2	96	66.225	ENSGMOG00000000629	scrt1b	96	66.225	Gadus_morhua
ENSCSEG00000021542	scrt2	99	78.328	ENSGMOG00000019519	scrt2	99	78.328	Gadus_morhua
ENSCSEG00000021542	scrt2	97	60.726	ENSGALG00000028912	SCRT2	97	61.716	Gallus_gallus
ENSCSEG00000021542	scrt2	100	84.953	ENSGAFG00000003093	scrt2	100	84.953	Gambusia_affinis
ENSCSEG00000021542	scrt2	96	66.997	ENSGAFG00000007636	scrt1b	96	66.997	Gambusia_affinis
ENSCSEG00000021542	scrt2	99	60.191	ENSGAFG00000009650	-	100	60.191	Gambusia_affinis
ENSCSEG00000021542	scrt2	97	61.587	ENSGACG00000004072	-	97	61.076	Gasterosteus_aculeatus
ENSCSEG00000021542	scrt2	96	63.576	ENSGACG00000008982	scrt1b	96	63.576	Gasterosteus_aculeatus
ENSCSEG00000021542	scrt2	97	60.390	ENSGAGG00000020761	SCRT2	97	62.338	Gopherus_agassizii
ENSCSEG00000021542	scrt2	64	71.642	ENSGAGG00000020760	-	71	74.627	Gopherus_agassizii
ENSCSEG00000021542	scrt2	97	65.461	ENSGAGG00000011736	SCRT1	98	65.461	Gopherus_agassizii
ENSCSEG00000021542	scrt2	100	91.850	ENSHBUG00000012492	scrt2	100	91.850	Haplochromis_burtoni
ENSCSEG00000021542	scrt2	97	61.146	ENSHBUG00000019101	-	97	61.146	Haplochromis_burtoni
ENSCSEG00000021542	scrt2	96	66.997	ENSHBUG00000016621	scrt1b	96	66.997	Haplochromis_burtoni
ENSCSEG00000021542	scrt2	100	82.500	ENSHCOG00000008116	scrt2	100	82.500	Hippocampus_comes
ENSCSEG00000021542	scrt2	97	59.804	ENSHCOG00000016179	-	97	60.784	Hippocampus_comes
ENSCSEG00000021542	scrt2	96	66.337	ENSHCOG00000016704	scrt1b	96	66.337	Hippocampus_comes
ENSCSEG00000021542	scrt2	97	62.706	ENSIPUG00000005547	-	98	62.706	Ictalurus_punctatus
ENSCSEG00000021542	scrt2	97	66.885	ENSIPUG00000004551	scrt1a	97	66.885	Ictalurus_punctatus
ENSCSEG00000021542	scrt2	96	66.997	ENSKMAG00000005484	scrt1b	96	66.997	Kryptolebias_marmoratus
ENSCSEG00000021542	scrt2	100	91.536	ENSKMAG00000018087	scrt2	100	91.536	Kryptolebias_marmoratus
ENSCSEG00000021542	scrt2	99	59.752	ENSKMAG00000009489	-	100	59.752	Kryptolebias_marmoratus
ENSCSEG00000021542	scrt2	97	58.280	ENSLBEG00000023388	-	97	60.510	Labrus_bergylta
ENSCSEG00000021542	scrt2	100	93.438	ENSLBEG00000015419	scrt2	100	93.438	Labrus_bergylta
ENSCSEG00000021542	scrt2	97	67.657	ENSLACG00000003588	SCRT1	96	67.327	Latimeria_chalumnae
ENSCSEG00000021542	scrt2	100	63.580	ENSLOCG00000002246	scrt2	100	63.190	Lepisosteus_oculatus
ENSCSEG00000021542	scrt2	97	68.317	ENSLOCG00000007573	scrt1b	97	68.317	Lepisosteus_oculatus
ENSCSEG00000021542	scrt2	96	66.667	ENSMAMG00000011698	scrt1b	96	66.667	Mastacembelus_armatus
ENSCSEG00000021542	scrt2	100	92.790	ENSMAMG00000001291	scrt2	100	92.790	Mastacembelus_armatus
ENSCSEG00000021542	scrt2	100	91.850	ENSMZEG00005026445	scrt2	100	91.850	Maylandia_zebra
ENSCSEG00000021542	scrt2	97	61.146	ENSMZEG00005026702	-	97	61.146	Maylandia_zebra
ENSCSEG00000021542	scrt2	96	66.997	ENSMZEG00005005627	scrt1b	96	66.997	Maylandia_zebra
ENSCSEG00000021542	scrt2	82	66.797	ENSMGAG00000016579	SCRT2	97	67.578	Meleagris_gallopavo
ENSCSEG00000021542	scrt2	99	89.937	ENSMMOG00000009272	scrt2	99	92.138	Mola_mola
ENSCSEG00000021542	scrt2	96	64.686	ENSMMOG00000003327	scrt1b	96	64.686	Mola_mola
ENSCSEG00000021542	scrt2	97	60.883	ENSMMOG00000018345	-	97	60.883	Mola_mola
ENSCSEG00000021542	scrt2	100	78.594	ENSMALG00000013656	scrt2	100	78.594	Monopterus_albus
ENSCSEG00000021542	scrt2	96	66.997	ENSMALG00000012704	scrt1b	96	66.997	Monopterus_albus
ENSCSEG00000021542	scrt2	51	77.987	ENSNGAG00000020815	Scrt2	75	79.870	Nannospalax_galili
ENSCSEG00000021542	scrt2	96	66.337	ENSNBRG00000013983	scrt1b	96	65.894	Neolamprologus_brichardi
ENSCSEG00000021542	scrt2	100	79.624	ENSNBRG00000007221	scrt2	100	79.624	Neolamprologus_brichardi
ENSCSEG00000021542	scrt2	97	61.146	ENSNBRG00000014882	-	97	61.146	Neolamprologus_brichardi
ENSCSEG00000021542	scrt2	100	62.538	ENSONIG00000003152	-	100	62.939	Oreochromis_niloticus
ENSCSEG00000021542	scrt2	100	92.476	ENSONIG00000016758	scrt2	100	92.476	Oreochromis_niloticus
ENSCSEG00000021542	scrt2	97	59.517	ENSONIG00000019809	-	100	59.517	Oreochromis_niloticus
ENSCSEG00000021542	scrt2	96	66.337	ENSONIG00000006007	scrt1b	100	64.194	Oreochromis_niloticus
ENSCSEG00000021542	scrt2	100	89.969	ENSORLG00000024051	scrt2	100	89.969	Oryzias_latipes
ENSCSEG00000021542	scrt2	96	66.667	ENSORLG00000025651	scrt1b	96	66.667	Oryzias_latipes
ENSCSEG00000021542	scrt2	99	58.716	ENSORLG00000022825	-	100	58.716	Oryzias_latipes
ENSCSEG00000021542	scrt2	100	89.969	ENSORLG00020011478	scrt2	100	89.969	Oryzias_latipes_hni
ENSCSEG00000021542	scrt2	96	66.667	ENSORLG00020012967	scrt1b	96	66.667	Oryzias_latipes_hni
ENSCSEG00000021542	scrt2	100	89.969	ENSORLG00015005524	scrt2	100	89.969	Oryzias_latipes_hsok
ENSCSEG00000021542	scrt2	99	60.061	ENSORLG00015010104	-	100	60.061	Oryzias_latipes_hsok
ENSCSEG00000021542	scrt2	96	66.667	ENSORLG00015019165	scrt1b	96	66.667	Oryzias_latipes_hsok
ENSCSEG00000021542	scrt2	96	66.667	ENSOMEG00000003925	scrt1b	96	66.667	Oryzias_melastigma
ENSCSEG00000021542	scrt2	100	90.282	ENSOMEG00000002661	scrt2	100	90.282	Oryzias_melastigma
ENSCSEG00000021542	scrt2	99	60.494	ENSOMEG00000000286	-	100	59.877	Oryzias_melastigma
ENSCSEG00000021542	scrt2	97	67.327	ENSPKIG00000022303	SCRT1	97	67.327	Paramormyrops_kingsleyae
ENSCSEG00000021542	scrt2	97	67.327	ENSPKIG00000020085	scrt1a	97	66.337	Paramormyrops_kingsleyae
ENSCSEG00000021542	scrt2	100	78.981	ENSPMGG00000016561	scrt2	100	78.981	Periophthalmus_magnuspinnatus
ENSCSEG00000021542	scrt2	97	61.538	ENSPMGG00000021402	-	97	60.897	Periophthalmus_magnuspinnatus
ENSCSEG00000021542	scrt2	96	64.901	ENSPMGG00000002260	scrt1b	96	64.901	Periophthalmus_magnuspinnatus
ENSCSEG00000021542	scrt2	100	91.536	ENSPFOG00000007738	scrt2	100	91.536	Poecilia_formosa
ENSCSEG00000021542	scrt2	96	66.997	ENSPFOG00000017719	scrt1b	96	66.997	Poecilia_formosa
ENSCSEG00000021542	scrt2	99	60.991	ENSPFOG00000005616	-	100	60.991	Poecilia_formosa
ENSCSEG00000021542	scrt2	100	82.759	ENSPLAG00000005765	scrt2	100	82.759	Poecilia_latipinna
ENSCSEG00000021542	scrt2	99	60.991	ENSPLAG00000011718	-	100	60.991	Poecilia_latipinna
ENSCSEG00000021542	scrt2	96	66.997	ENSPLAG00000009876	scrt1b	96	66.997	Poecilia_latipinna
ENSCSEG00000021542	scrt2	100	82.759	ENSPMEG00000001538	scrt2	100	82.759	Poecilia_mexicana
ENSCSEG00000021542	scrt2	96	66.997	ENSPMEG00000013274	scrt1b	96	66.997	Poecilia_mexicana
ENSCSEG00000021542	scrt2	99	60.991	ENSPMEG00000011706	-	100	60.991	Poecilia_mexicana
ENSCSEG00000021542	scrt2	96	66.997	ENSPREG00000018985	scrt1b	96	66.997	Poecilia_reticulata
ENSCSEG00000021542	scrt2	100	91.536	ENSPREG00000001147	scrt2	100	91.536	Poecilia_reticulata
ENSCSEG00000021542	scrt2	99	60.681	ENSPREG00000012166	-	100	60.681	Poecilia_reticulata
ENSCSEG00000021542	scrt2	96	66.997	ENSPNYG00000017733	scrt1b	96	66.997	Pundamilia_nyererei
ENSCSEG00000021542	scrt2	97	61.146	ENSPNYG00000008865	-	97	61.146	Pundamilia_nyererei
ENSCSEG00000021542	scrt2	100	79.624	ENSPNYG00000013109	scrt2	100	79.624	Pundamilia_nyererei
ENSCSEG00000021542	scrt2	97	62.829	ENSPNAG00000027880	-	98	64.935	Pygocentrus_nattereri
ENSCSEG00000021542	scrt2	97	66.450	ENSPNAG00000017415	scrt1a	97	66.450	Pygocentrus_nattereri
ENSCSEG00000021542	scrt2	97	66.667	ENSSFOG00015001195	SCRT1	97	66.007	Scleropages_formosus
ENSCSEG00000021542	scrt2	97	59.937	ENSSMAG00000005122	-	97	59.937	Scophthalmus_maximus
ENSCSEG00000021542	scrt2	96	66.007	ENSSMAG00000019207	scrt1b	96	66.007	Scophthalmus_maximus
ENSCSEG00000021542	scrt2	96	88.312	ENSSDUG00000001637	scrt2	95	88.312	Seriola_dumerili
ENSCSEG00000021542	scrt2	97	60.828	ENSSDUG00000013215	-	97	60.828	Seriola_dumerili
ENSCSEG00000021542	scrt2	96	66.997	ENSSDUG00000007752	scrt1b	96	66.997	Seriola_dumerili
ENSCSEG00000021542	scrt2	97	60.828	ENSSLDG00000016454	-	97	60.828	Seriola_lalandi_dorsalis
ENSCSEG00000021542	scrt2	96	66.997	ENSSLDG00000017166	scrt1b	96	66.997	Seriola_lalandi_dorsalis
ENSCSEG00000021542	scrt2	100	93.103	ENSSLDG00000013565	scrt2	100	93.103	Seriola_lalandi_dorsalis
ENSCSEG00000021542	scrt2	97	62.171	ENSSPUG00000018637	SCRT2	97	64.145	Sphenodon_punctatus
ENSCSEG00000021542	scrt2	96	66.997	ENSSPAG00000002200	scrt1b	96	66.997	Stegastes_partitus
ENSCSEG00000021542	scrt2	100	80.878	ENSSPAG00000014018	scrt2	100	80.878	Stegastes_partitus
ENSCSEG00000021542	scrt2	97	61.465	ENSSPAG00000006788	-	97	61.465	Stegastes_partitus
ENSCSEG00000021542	scrt2	82	63.672	ENSTGUG00000006801	SCRT2	99	67.188	Taeniopygia_guttata
ENSCSEG00000021542	scrt2	96	66.225	ENSTRUG00000011637	scrt1b	97	66.225	Takifugu_rubripes
ENSCSEG00000021542	scrt2	97	60.828	ENSTRUG00000012719	-	97	63.057	Takifugu_rubripes
ENSCSEG00000021542	scrt2	99	85.849	ENSTRUG00000007620	scrt2	99	84.906	Takifugu_rubripes
ENSCSEG00000021542	scrt2	82	63.424	ENSTRUG00000019558	-	79	66.148	Takifugu_rubripes
ENSCSEG00000021542	scrt2	99	90.566	ENSTNIG00000012473	scrt2	99	90.252	Tetraodon_nigroviridis
ENSCSEG00000021542	scrt2	96	65.894	ENSTNIG00000018384	scrt1b	96	66.225	Tetraodon_nigroviridis
ENSCSEG00000021542	scrt2	100	84.953	ENSXCOG00000014367	scrt2	100	84.953	Xiphophorus_couchianus
ENSCSEG00000021542	scrt2	99	58.917	ENSXCOG00000019861	-	100	58.917	Xiphophorus_couchianus
ENSCSEG00000021542	scrt2	96	66.997	ENSXCOG00000019675	scrt1b	96	66.997	Xiphophorus_couchianus
ENSCSEG00000021542	scrt2	99	60.681	ENSXMAG00000015353	-	100	60.681	Xiphophorus_maculatus
ENSCSEG00000021542	scrt2	100	90.909	ENSXMAG00000028567	scrt2	100	90.909	Xiphophorus_maculatus
ENSCSEG00000021542	scrt2	96	66.997	ENSXMAG00000027885	scrt1b	96	66.997	Xiphophorus_maculatus