EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSEG00000021574 (Gene tree)
Gene ID: 103392660
Gene Symbol: ddx42
Alias: im:7148194|si:dkey-15n1.10|zgc:111815
Full Name: DEAD-box helicase 42
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 7877 bases
Position: chr17:3111225-3119101
Accession: 103392660
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033621	ResIII	PF04851.15	1.5e-06	1	1
ENSCSEP00000033626	ResIII	PF04851.15	1.6e-06	1	1
ENSCSEP00000033631	ResIII	PF04851.15	1.8e-06	1	1
ENSCSEP00000033626	DEAD	PF00270.29	9e-48	1	1
ENSCSEP00000033631	DEAD	PF00270.29	9.5e-48	1	1
ENSCSEP00000033621	DEAD	PF00270.29	9.7e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000034055	-	4951	XM_008329323	ENSCSEP00000033621	908 (aa)	XP_008327545	UPI000496656D
ENSCSET00000034060	-	2787	-	ENSCSEP00000033626	924 (aa)	-	-
ENSCSET00000034065	-	2682	XM_008329322	ENSCSEP00000033631	893 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000021574's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSEG00000021574	ddx42	52	36.436	ENSCSEG00000003352	-	61	37.391
ENSCSEG00000021574	ddx42	61	42.087	ENSCSEG00000016886	ddx46	56	41.219

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021574	ddx42	99	68.822	ENSG00000198231	DDX42	98	77.551	Homo_sapiens
ENSCSEG00000021574	ddx42	91	89.157	ENSAPOG00000017675	ddx42	93	89.398	Acanthochromis_polyacanthus
ENSCSEG00000021574	ddx42	99	70.390	ENSAMEG00000003200	DDX42	89	74.614	Ailuropoda_melanoleuca
ENSCSEG00000021574	ddx42	84	86.934	ENSACIG00000007376	ddx42	99	88.098	Amphilophus_citrinellus
ENSCSEG00000021574	ddx42	100	84.799	ENSAOCG00000003520	ddx42	100	84.848	Amphiprion_ocellaris
ENSCSEG00000021574	ddx42	100	85.590	ENSAPEG00000000984	ddx42	100	86.369	Amphiprion_percula
ENSCSEG00000021574	ddx42	100	87.093	ENSATEG00000022920	ddx42	100	86.876	Anabas_testudineus
ENSCSEG00000021574	ddx42	99	68.915	ENSAPLG00000010544	DDX42	84	78.617	Anas_platyrhynchos
ENSCSEG00000021574	ddx42	99	72.240	ENSACAG00000003994	DDX42	99	71.259	Anolis_carolinensis
ENSCSEG00000021574	ddx42	99	70.149	ENSANAG00000035693	DDX42	98	75.960	Aotus_nancymaae
ENSCSEG00000021574	ddx42	91	88.675	ENSACLG00000025113	ddx42	100	87.432	Astatotilapia_calliptera
ENSCSEG00000021574	ddx42	97	75.242	ENSAMXG00000011435	ddx42	89	79.210	Astyanax_mexicanus
ENSCSEG00000021574	ddx42	99	70.170	ENSBTAG00000021058	DDX42	97	75.827	Bos_taurus
ENSCSEG00000021574	ddx42	66	52.747	WBGene00008119	C46F11.4	70	56.424	Caenorhabditis_elegans
ENSCSEG00000021574	ddx42	99	70.256	ENSCJAG00000019649	DDX42	99	78.784	Callithrix_jacchus
ENSCSEG00000021574	ddx42	99	70.576	ENSCAFG00000012818	DDX42	91	73.974	Canis_familiaris
ENSCSEG00000021574	ddx42	99	70.576	ENSCAFG00020026631	DDX42	91	73.974	Canis_lupus_dingo
ENSCSEG00000021574	ddx42	99	71.892	ENSCHIG00000014431	DDX42	92	75.297	Capra_hircus
ENSCSEG00000021574	ddx42	100	69.125	ENSTSYG00000001380	DDX42	91	73.592	Carlito_syrichta
ENSCSEG00000021574	ddx42	70	62.617	ENSCAPG00000013621	DDX42	94	59.795	Cavia_aperea
ENSCSEG00000021574	ddx42	99	69.851	ENSCPOG00000005633	DDX42	91	74.144	Cavia_porcellus
ENSCSEG00000021574	ddx42	99	66.026	ENSCCAG00000020612	DDX42	97	75.783	Cebus_capucinus
ENSCSEG00000021574	ddx42	99	69.799	ENSCATG00000030490	DDX42	87	78.306	Cercocebus_atys
ENSCSEG00000021574	ddx42	99	71.154	ENSCLAG00000003497	DDX42	91	74.498	Chinchilla_lanigera
ENSCSEG00000021574	ddx42	99	65.593	ENSCSAG00000003914	DDX42	92	69.390	Chlorocebus_sabaeus
ENSCSEG00000021574	ddx42	63	83.929	ENSCHOG00000006241	DDX42	61	85.455	Choloepus_hoffmanni
ENSCSEG00000021574	ddx42	99	71.113	ENSCPBG00000026682	DDX42	90	74.122	Chrysemys_picta_bellii
ENSCSEG00000021574	ddx42	50	67.040	ENSCING00000001837	-	97	66.592	Ciona_intestinalis
ENSCSEG00000021574	ddx42	99	69.799	ENSCANG00000034663	DDX42	94	79.279	Colobus_angolensis_palliatus
ENSCSEG00000021574	ddx42	99	70.651	ENSCGRG00001009775	Ddx42	99	70.525	Cricetulus_griseus_chok1gshd
ENSCSEG00000021574	ddx42	99	70.651	ENSCGRG00000011718	Ddx42	99	70.525	Cricetulus_griseus_crigri
ENSCSEG00000021574	ddx42	100	84.337	ENSCVAG00000011404	ddx42	100	84.995	Cyprinodon_variegatus
ENSCSEG00000021574	ddx42	100	76.582	ENSDARG00000037928	ddx42	92	80.941	Danio_rerio
ENSCSEG00000021574	ddx42	99	68.703	ENSDNOG00000007961	DDX42	99	68.364	Dasypus_novemcinctus
ENSCSEG00000021574	ddx42	99	63.868	ENSDORG00000004199	Ddx42	90	67.059	Dipodomys_ordii
ENSCSEG00000021574	ddx42	67	59.355	FBgn0036104	CG6418	84	57.271	Drosophila_melanogaster
ENSCSEG00000021574	ddx42	85	70.785	ENSEBUG00000001155	ddx42	94	70.551	Eptatretus_burgeri
ENSCSEG00000021574	ddx42	100	70.285	ENSEASG00005013089	DDX42	99	75.892	Equus_asinus_asinus
ENSCSEG00000021574	ddx42	99	70.138	ENSECAG00000022684	DDX42	91	73.974	Equus_caballus
ENSCSEG00000021574	ddx42	60	83.784	ENSEEUG00000009144	DDX42	73	88.571	Erinaceus_europaeus
ENSCSEG00000021574	ddx42	97	78.070	ENSELUG00000020593	ddx42	92	80.494	Esox_lucius
ENSCSEG00000021574	ddx42	99	70.469	ENSFCAG00000003499	DDX42	91	74.209	Felis_catus
ENSCSEG00000021574	ddx42	86	77.806	ENSFALG00000004675	DDX42	79	70.045	Ficedula_albicollis
ENSCSEG00000021574	ddx42	99	70.789	ENSFDAG00000020516	DDX42	90	74.262	Fukomys_damarensis
ENSCSEG00000021574	ddx42	100	82.860	ENSFHEG00000023290	ddx42	100	83.734	Fundulus_heteroclitus
ENSCSEG00000021574	ddx42	88	83.830	ENSGMOG00000004595	ddx42	79	83.830	Gadus_morhua
ENSCSEG00000021574	ddx42	99	69.675	ENSGALG00000000581	DDX42	82	78.873	Gallus_gallus
ENSCSEG00000021574	ddx42	95	84.624	ENSGAFG00000011846	ddx42	91	87.440	Gambusia_affinis
ENSCSEG00000021574	ddx42	100	79.716	ENSGACG00000009782	ddx42	94	81.971	Gasterosteus_aculeatus
ENSCSEG00000021574	ddx42	99	71.203	ENSGAGG00000024411	DDX42	89	74.413	Gopherus_agassizii
ENSCSEG00000021574	ddx42	99	69.831	ENSGGOG00000006779	DDX42	97	75.783	Gorilla_gorilla
ENSCSEG00000021574	ddx42	91	88.795	ENSHBUG00000008705	ddx42	100	87.541	Haplochromis_burtoni
ENSCSEG00000021574	ddx42	99	68.370	ENSHGLG00000010024	DDX42	90	71.274	Heterocephalus_glaber_female
ENSCSEG00000021574	ddx42	99	70.319	ENSHGLG00100004479	-	91	73.974	Heterocephalus_glaber_male
ENSCSEG00000021574	ddx42	87	55.817	ENSHGLG00100007138	-	86	56.410	Heterocephalus_glaber_male
ENSCSEG00000021574	ddx42	86	82.510	ENSHCOG00000003357	ddx42	95	81.643	Hippocampus_comes
ENSCSEG00000021574	ddx42	100	76.605	ENSIPUG00000013327	ddx42	93	80.861	Ictalurus_punctatus
ENSCSEG00000021574	ddx42	99	70.426	ENSSTOG00000008922	DDX42	91	74.005	Ictidomys_tridecemlineatus
ENSCSEG00000021574	ddx42	99	71.152	ENSJJAG00000011727	Ddx42	91	75.149	Jaculus_jaculus
ENSCSEG00000021574	ddx42	100	84.716	ENSKMAG00000009914	ddx42	100	85.714	Kryptolebias_marmoratus
ENSCSEG00000021574	ddx42	100	79.473	ENSLBEG00000004687	ddx42	100	79.490	Labrus_bergylta
ENSCSEG00000021574	ddx42	99	72.086	ENSLACG00000013476	DDX42	97	73.210	Latimeria_chalumnae
ENSCSEG00000021574	ddx42	100	79.045	ENSLOCG00000011764	ddx42	100	77.500	Lepisosteus_oculatus
ENSCSEG00000021574	ddx42	99	71.368	ENSLAFG00000003249	DDX42	91	74.209	Loxodonta_africana
ENSCSEG00000021574	ddx42	99	69.263	ENSMFAG00000031356	DDX42	92	73.341	Macaca_fascicularis
ENSCSEG00000021574	ddx42	99	69.777	ENSMMUG00000016762	DDX42	92	78.306	Macaca_mulatta
ENSCSEG00000021574	ddx42	99	69.263	ENSMNEG00000038250	DDX42	87	79.305	Macaca_nemestrina
ENSCSEG00000021574	ddx42	99	68.757	ENSMLEG00000043080	DDX42	92	72.917	Mandrillus_leucophaeus
ENSCSEG00000021574	ddx42	91	88.755	ENSMAMG00000021888	ddx42	99	84.199	Mastacembelus_armatus
ENSCSEG00000021574	ddx42	91	88.675	ENSMZEG00005023103	ddx42	100	87.432	Maylandia_zebra
ENSCSEG00000021574	ddx42	99	69.360	ENSMGAG00000001822	DDX42	82	78.873	Meleagris_gallopavo
ENSCSEG00000021574	ddx42	76	75.847	ENSMAUG00000020774	-	94	75.847	Mesocricetus_auratus
ENSCSEG00000021574	ddx42	99	70.450	ENSMICG00000009952	DDX42	91	73.908	Microcebus_murinus
ENSCSEG00000021574	ddx42	99	70.569	ENSMOCG00000015504	Ddx42	99	70.366	Microtus_ochrogaster
ENSCSEG00000021574	ddx42	91	82.830	ENSMMOG00000016963	ddx42	85	83.192	Mola_mola
ENSCSEG00000021574	ddx42	51	82.303	ENSMODG00000009917	-	98	82.516	Monodelphis_domestica
ENSCSEG00000021574	ddx42	100	87.925	ENSMALG00000007800	ddx42	100	87.267	Monopterus_albus
ENSCSEG00000021574	ddx42	99	70.224	MGP_CAROLIEiJ_G0017314	Ddx42	91	74.616	Mus_caroli
ENSCSEG00000021574	ddx42	99	70.224	ENSMUSG00000020705	Ddx42	91	74.616	Mus_musculus
ENSCSEG00000021574	ddx42	74	83.111	MGP_PahariEiJ_G0018444	-	95	83.308	Mus_pahari
ENSCSEG00000021574	ddx42	99	70.117	MGP_SPRETEiJ_G0018158	Ddx42	91	74.498	Mus_spretus
ENSCSEG00000021574	ddx42	99	69.570	ENSMPUG00000014921	DDX42	90	74.091	Mustela_putorius_furo
ENSCSEG00000021574	ddx42	99	69.328	ENSMLUG00000011645	DDX42	99	69.118	Myotis_lucifugus
ENSCSEG00000021574	ddx42	99	70.607	ENSNGAG00000021897	Ddx42	91	74.498	Nannospalax_galili
ENSCSEG00000021574	ddx42	90	88.480	ENSNBRG00000004466	ddx42	100	86.570	Neolamprologus_brichardi
ENSCSEG00000021574	ddx42	99	70.426	ENSNLEG00000004248	DDX42	99	75.926	Nomascus_leucogenys
ENSCSEG00000021574	ddx42	76	69.759	ENSMEUG00000013227	-	71	69.759	Notamacropus_eugenii
ENSCSEG00000021574	ddx42	99	69.345	ENSOPRG00000014960	DDX42	90	73.826	Ochotona_princeps
ENSCSEG00000021574	ddx42	99	67.519	ENSODEG00000007810	DDX42	90	70.838	Octodon_degus
ENSCSEG00000021574	ddx42	91	88.554	ENSONIG00000000734	ddx42	100	87.541	Oreochromis_niloticus
ENSCSEG00000021574	ddx42	59	81.852	ENSOANG00000000265	DDX42	100	81.852	Ornithorhynchus_anatinus
ENSCSEG00000021574	ddx42	94	70.889	ENSOCUG00000004304	DDX42	83	73.770	Oryctolagus_cuniculus
ENSCSEG00000021574	ddx42	100	85.307	ENSORLG00000002395	ddx42	100	84.693	Oryzias_latipes
ENSCSEG00000021574	ddx42	100	86.369	ENSORLG00020011621	ddx42	100	86.513	Oryzias_latipes_hni
ENSCSEG00000021574	ddx42	100	86.369	ENSORLG00015004487	ddx42	100	86.623	Oryzias_latipes_hsok
ENSCSEG00000021574	ddx42	100	86.513	ENSOMEG00000020093	ddx42	100	86.294	Oryzias_melastigma
ENSCSEG00000021574	ddx42	99	69.547	ENSOGAG00000006872	DDX42	90	74.296	Otolemur_garnettii
ENSCSEG00000021574	ddx42	99	69.634	ENSOARG00000013540	DDX42	89	74.560	Ovis_aries
ENSCSEG00000021574	ddx42	99	69.937	ENSPPAG00000007496	DDX42	97	75.931	Pan_paniscus
ENSCSEG00000021574	ddx42	99	70.201	ENSPPRG00000002740	DDX42	91	73.974	Panthera_pardus
ENSCSEG00000021574	ddx42	99	70.201	ENSPTIG00000009932	DDX42	91	73.974	Panthera_tigris_altaica
ENSCSEG00000021574	ddx42	99	69.937	ENSPTRG00000009523	DDX42	97	75.931	Pan_troglodytes
ENSCSEG00000021574	ddx42	99	69.905	ENSPANG00000020990	DDX42	87	78.947	Papio_anubis
ENSCSEG00000021574	ddx42	100	75.685	ENSPKIG00000002901	ddx42	97	81.116	Paramormyrops_kingsleyae
ENSCSEG00000021574	ddx42	85	78.344	ENSPSIG00000010289	DDX42	95	78.217	Pelodiscus_sinensis
ENSCSEG00000021574	ddx42	100	82.009	ENSPMGG00000009323	ddx42	100	79.231	Periophthalmus_magnuspinnatus
ENSCSEG00000021574	ddx42	99	70.127	ENSPEMG00000006755	Ddx42	90	74.734	Peromyscus_maniculatus_bairdii
ENSCSEG00000021574	ddx42	82	72.513	ENSPMAG00000005580	ddx42	99	72.775	Petromyzon_marinus
ENSCSEG00000021574	ddx42	99	70.188	ENSPCIG00000009093	DDX42	91	73.642	Phascolarctos_cinereus
ENSCSEG00000021574	ddx42	100	82.090	ENSPFOG00000014104	ddx42	100	83.547	Poecilia_formosa
ENSCSEG00000021574	ddx42	100	81.770	ENSPLAG00000010522	ddx42	100	83.226	Poecilia_latipinna
ENSCSEG00000021574	ddx42	100	81.693	ENSPMEG00000010744	ddx42	100	81.635	Poecilia_mexicana
ENSCSEG00000021574	ddx42	100	81.303	ENSPREG00000009926	ddx42	100	80.274	Poecilia_reticulata
ENSCSEG00000021574	ddx42	99	67.650	ENSPPYG00000008531	DDX42	89	72.373	Pongo_abelii
ENSCSEG00000021574	ddx42	92	66.090	ENSPCAG00000002474	DDX42	90	69.476	Procavia_capensis
ENSCSEG00000021574	ddx42	99	60.401	ENSPCOG00000001559	DDX42	91	71.963	Propithecus_coquereli
ENSCSEG00000021574	ddx42	99	67.945	ENSPVAG00000000160	DDX42	91	71.714	Pteropus_vampyrus
ENSCSEG00000021574	ddx42	75	86.337	ENSPNYG00000013954	ddx42	97	85.123	Pundamilia_nyererei
ENSCSEG00000021574	ddx42	97	76.099	ENSPNAG00000017352	ddx42	90	80.397	Pygocentrus_nattereri
ENSCSEG00000021574	ddx42	99	70.544	ENSRNOG00000009474	Ddx42	91	74.852	Rattus_norvegicus
ENSCSEG00000021574	ddx42	99	68.803	ENSRBIG00000004781	DDX42	94	79.248	Rhinopithecus_bieti
ENSCSEG00000021574	ddx42	99	69.158	ENSRROG00000029794	DDX42	92	73.225	Rhinopithecus_roxellana
ENSCSEG00000021574	ddx42	99	70.117	ENSSBOG00000029624	DDX42	97	75.892	Saimiri_boliviensis_boliviensis
ENSCSEG00000021574	ddx42	99	70.052	ENSSHAG00000012896	-	91	73.495	Sarcophilus_harrisii
ENSCSEG00000021574	ddx42	72	49.327	ENSSHAG00000007919	-	99	48.286	Sarcophilus_harrisii
ENSCSEG00000021574	ddx42	85	85.123	ENSSFOG00015014064	ddx42	83	85.123	Scleropages_formosus
ENSCSEG00000021574	ddx42	100	85.854	ENSSMAG00000009077	ddx42	100	84.676	Scophthalmus_maximus
ENSCSEG00000021574	ddx42	100	88.139	ENSSDUG00000022221	ddx42	100	87.595	Seriola_dumerili
ENSCSEG00000021574	ddx42	100	87.157	ENSSLDG00000018483	ddx42	100	86.608	Seriola_lalandi_dorsalis
ENSCSEG00000021574	ddx42	99	69.787	ENSSARG00000009847	DDX42	91	73.505	Sorex_araneus
ENSCSEG00000021574	ddx42	99	72.115	ENSSPUG00000018806	DDX42	99	70.481	Sphenodon_punctatus
ENSCSEG00000021574	ddx42	100	88.962	ENSSPAG00000013055	ddx42	100	88.962	Stegastes_partitus
ENSCSEG00000021574	ddx42	85	69.165	ENSSSCG00000017289	DDX42	86	74.792	Sus_scrofa
ENSCSEG00000021574	ddx42	99	70.106	ENSTGUG00000001931	DDX42	99	70.043	Taeniopygia_guttata
ENSCSEG00000021574	ddx42	100	81.469	ENSTRUG00000010711	ddx42	99	89.013	Takifugu_rubripes
ENSCSEG00000021574	ddx42	82	75.668	ENSTBEG00000010159	DDX42	98	75.668	Tupaia_belangeri
ENSCSEG00000021574	ddx42	99	70.701	ENSTTRG00000006962	DDX42	91	74.678	Tursiops_truncatus
ENSCSEG00000021574	ddx42	99	70.776	ENSUAMG00000007321	DDX42	89	74.614	Ursus_americanus
ENSCSEG00000021574	ddx42	99	69.271	ENSUMAG00000017438	DDX42	91	73.740	Ursus_maritimus
ENSCSEG00000021574	ddx42	94	71.329	ENSVPAG00000009633	DDX42	84	71.523	Vicugna_pacos
ENSCSEG00000021574	ddx42	99	70.682	ENSVVUG00000006095	DDX42	91	74.091	Vulpes_vulpes
ENSCSEG00000021574	ddx42	100	71.895	ENSXETG00000003245	ddx42	100	71.429	Xenopus_tropicalis
ENSCSEG00000021574	ddx42	84	85.714	ENSXCOG00000017560	ddx42	97	85.584	Xiphophorus_couchianus
ENSCSEG00000021574	ddx42	100	86.169	ENSXMAG00000008138	ddx42	100	86.059	Xiphophorus_maculatus