EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCSEG00000021605 (Gene tree)
Gene ID: 103392668
Gene Symbol: setd1a
Alias: -
Full Name: histone-lysine N-methyltransferase SETD1A
Gene Type: protein_coding
Species: Cynoglossus_semilaevis
Status: putative
Strand: Plus strand
Length: 19456 bases
Position: chr17:3193301-3212756
Accession: 103392668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSEP00000033673	RRM_1	PF00076.22	0.00014	1	1
ENSCSEP00000033671	RRM_1	PF00076.22	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSET00000034107	-	10037	XM_008329339	ENSCSEP00000033673	2190 (aa)	XP_008327561	UPI00049738C1
ENSCSET00000034105	-	10149	-	ENSCSEP00000033671	2204 (aa)	-	-

Gene Model

Click here to download ENSCSEG00000021605's gene model file

Pathways

Pathway ID	Pathway Name	Source
csem00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCSEG00000021605's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSEG00000021605	setd1a	82	94.527	ENSAPOG00000018002	setd1a	81	80.881	Acanthochromis_polyacanthus
ENSCSEG00000021605	setd1a	76	88.288	ENSACIG00000007144	setd1a	99	88.288	Amphilophus_citrinellus
ENSCSEG00000021605	setd1a	100	81.213	ENSAOCG00000003663	setd1a	100	81.753	Amphiprion_ocellaris
ENSCSEG00000021605	setd1a	100	80.586	ENSATEG00000022798	setd1a	100	81.126	Anabas_testudineus
ENSCSEG00000021605	setd1a	100	80.324	ENSACLG00000024747	setd1a	100	81.301	Astatotilapia_calliptera
ENSCSEG00000021605	setd1a	53	79.798	ENSCAPG00000006491	-	57	79.798	Cavia_aperea
ENSCSEG00000021605	setd1a	62	67.138	ENSCPBG00000010830	-	56	79.730	Chrysemys_picta_bellii
ENSCSEG00000021605	setd1a	100	75.225	ENSCVAG00000011672	setd1a	100	75.980	Cyprinodon_variegatus
ENSCSEG00000021605	setd1a	96	64.248	ENSELUG00000020261	setd1a	73	73.895	Esox_lucius
ENSCSEG00000021605	setd1a	100	68.566	ENSFHEG00000023258	setd1a	68	83.333	Fundulus_heteroclitus
ENSCSEG00000021605	setd1a	62	92.593	ENSGAFG00000011698	setd1a	84	92.593	Gambusia_affinis
ENSCSEG00000021605	setd1a	79	84.153	ENSGACG00000013688	setd1a	89	84.426	Gasterosteus_aculeatus
ENSCSEG00000021605	setd1a	100	80.297	ENSHBUG00000008893	setd1a	100	81.287	Haplochromis_burtoni
ENSCSEG00000021605	setd1a	54	77.143	ENSHGLG00000014238	-	61	79.730	Heterocephalus_glaber_female
ENSCSEG00000021605	setd1a	76	85.795	ENSHCOG00000003119	setd1a	99	86.207	Hippocampus_comes
ENSCSEG00000021605	setd1a	100	78.004	ENSKMAG00000009484	setd1a	100	78.184	Kryptolebias_marmoratus
ENSCSEG00000021605	setd1a	69	76.747	ENSLBEG00000004399	setd1a	100	77.419	Labrus_bergylta
ENSCSEG00000021605	setd1a	71	87.687	ENSMAMG00000021851	setd1a	97	87.687	Mastacembelus_armatus
ENSCSEG00000021605	setd1a	100	80.766	ENSMZEG00005023141	setd1a	100	81.247	Maylandia_zebra
ENSCSEG00000021605	setd1a	74	84.950	ENSMMOG00000016992	setd1a	98	91.884	Mola_mola
ENSCSEG00000021605	setd1a	72	75.808	ENSMALG00000007401	setd1a	73	75.047	Monopterus_albus
ENSCSEG00000021605	setd1a	51	77.273	ENSMPUG00000011867	-	52	80.345	Mustela_putorius_furo
ENSCSEG00000021605	setd1a	50	78.289	ENSMLUG00000027303	-	57	78.289	Myotis_lucifugus
ENSCSEG00000021605	setd1a	74	76.100	ENSNBRG00000004760	setd1a	76	76.886	Neolamprologus_brichardi
ENSCSEG00000021605	setd1a	100	72.649	ENSORLG00000002213	setd1a	100	74.819	Oryzias_latipes
ENSCSEG00000021605	setd1a	100	72.818	ENSORLG00020011897	setd1a	100	74.672	Oryzias_latipes_hni
ENSCSEG00000021605	setd1a	100	73.315	ENSORLG00015004826	setd1a	100	74.672	Oryzias_latipes_hsok
ENSCSEG00000021605	setd1a	100	72.999	ENSOMEG00000019732	setd1a	75	73.494	Oryzias_melastigma
ENSCSEG00000021605	setd1a	57	68.942	ENSOGAG00000028006	-	62	68.243	Otolemur_garnettii
ENSCSEG00000021605	setd1a	51	80.755	ENSPTIG00000010871	-	64	80.224	Panthera_tigris_altaica
ENSCSEG00000021605	setd1a	100	71.855	ENSPFOG00000013669	setd1a	100	74.355	Poecilia_formosa
ENSCSEG00000021605	setd1a	100	73.791	ENSPLAG00000009294	setd1a	100	75.621	Poecilia_latipinna
ENSCSEG00000021605	setd1a	100	73.836	ENSPMEG00000005864	setd1a	100	75.711	Poecilia_mexicana
ENSCSEG00000021605	setd1a	73	73.864	ENSPREG00000010201	setd1a	100	75.328	Poecilia_reticulata
ENSCSEG00000021605	setd1a	100	80.162	ENSPNYG00000014139	setd1a	100	81.154	Pundamilia_nyererei
ENSCSEG00000021605	setd1a	51	80.887	ENSRBIG00000033047	-	63	80.546	Rhinopithecus_bieti
ENSCSEG00000021605	setd1a	100	81.131	ENSSMAG00000008846	setd1a	100	81.654	Scophthalmus_maximus
ENSCSEG00000021605	setd1a	100	82.950	ENSSDUG00000022142	setd1a	100	84.348	Seriola_dumerili
ENSCSEG00000021605	setd1a	100	82.942	ENSSLDG00000018250	setd1a	100	84.341	Seriola_lalandi_dorsalis
ENSCSEG00000021605	setd1a	100	81.532	ENSSPAG00000007822	setd1a	100	82.117	Stegastes_partitus
ENSCSEG00000021605	setd1a	78	83.191	ENSTRUG00000008953	setd1a	92	83.191	Takifugu_rubripes
ENSCSEG00000021605	setd1a	79	93.082	ENSTNIG00000014930	setd1a	78	89.722	Tetraodon_nigroviridis
ENSCSEG00000021605	setd1a	58	74.570	ENSXCOG00000017585	setd1a	59	75.606	Xiphophorus_couchianus
ENSCSEG00000021605	setd1a	100	73.917	ENSXMAG00000008021	setd1a	100	75.598	Xiphophorus_maculatus