EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000095 (Gene tree)
Gene ID: 107105048
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 7275 bases
Position: chrKL652537.1:942221-949495
Accession: 107105048
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001985	Beta-Casp	PF10996.8	7.3e-21	1	1
ENSCVAP00000002007	Beta-Casp	PF10996.8	7.8e-21	1	1
ENSCVAP00000001985	Lactamase_B	PF00753.27	3.8e-05	1	1
ENSCVAP00000002007	Lactamase_B	PF00753.27	3.9e-05	1	1
ENSCVAP00000001985	RMMBL	PF07521.12	3.8e-14	1	1
ENSCVAP00000002007	RMMBL	PF07521.12	4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000012474	-	3587	XM_015405169	ENSCVAP00000002007	787 (aa)	XP_015260655	UPI000742AD43
ENSCVAT00000012489	-	2304	-	ENSCVAP00000001985	767 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000000095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000095	cpsf2	100	85.298	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSCVAG00000000095	cpsf2	100	94.917	ENSAPOG00000001242	cpsf2	100	94.917	Acanthochromis_polyacanthus
ENSCVAG00000000095	cpsf2	100	94.670	ENSACIG00000009331	cpsf2	100	94.670	Amphilophus_citrinellus
ENSCVAG00000000095	cpsf2	100	95.426	ENSAOCG00000014095	cpsf2	100	95.426	Amphiprion_ocellaris
ENSCVAG00000000095	cpsf2	100	95.426	ENSAPEG00000009158	cpsf2	100	95.426	Amphiprion_percula
ENSCVAG00000000095	cpsf2	97	93.490	ENSATEG00000017644	cpsf2	99	93.121	Anabas_testudineus
ENSCVAG00000000095	cpsf2	100	85.190	ENSAPLG00000006330	CPSF2	100	85.190	Anas_platyrhynchos
ENSCVAG00000000095	cpsf2	100	85.044	ENSACAG00000009245	CPSF2	100	84.918	Anolis_carolinensis
ENSCVAG00000000095	cpsf2	100	85.551	ENSANAG00000022915	CPSF2	100	85.425	Aotus_nancymaae
ENSCVAG00000000095	cpsf2	100	88.973	ENSAMXG00000018696	cpsf2	100	88.847	Astyanax_mexicanus
ENSCVAG00000000095	cpsf2	100	85.425	ENSBTAG00000010227	CPSF2	100	85.298	Bos_taurus
ENSCVAG00000000095	cpsf2	100	42.007	WBGene00017313	cpsf-2	100	41.432	Caenorhabditis_elegans
ENSCVAG00000000095	cpsf2	100	85.551	ENSCJAG00000018069	CPSF2	100	85.425	Callithrix_jacchus
ENSCVAG00000000095	cpsf2	100	85.298	ENSCAFG00000010909	CPSF2	100	85.171	Canis_familiaris
ENSCVAG00000000095	cpsf2	100	85.298	ENSCAFG00020020670	CPSF2	100	85.171	Canis_lupus_dingo
ENSCVAG00000000095	cpsf2	100	85.425	ENSCHIG00000023848	CPSF2	100	85.298	Capra_hircus
ENSCVAG00000000095	cpsf2	100	85.678	ENSTSYG00000009036	CPSF2	100	85.551	Carlito_syrichta
ENSCVAG00000000095	cpsf2	100	85.425	ENSCPOG00000010899	CPSF2	100	85.298	Cavia_porcellus
ENSCVAG00000000095	cpsf2	100	85.551	ENSCCAG00000028088	CPSF2	100	85.425	Cebus_capucinus
ENSCVAG00000000095	cpsf2	100	85.425	ENSCATG00000030132	CPSF2	100	85.298	Cercocebus_atys
ENSCVAG00000000095	cpsf2	100	85.551	ENSCLAG00000012404	CPSF2	100	85.425	Chinchilla_lanigera
ENSCVAG00000000095	cpsf2	100	85.425	ENSCSAG00000011300	CPSF2	100	85.298	Chlorocebus_sabaeus
ENSCVAG00000000095	cpsf2	100	79.848	ENSCHOG00000012904	CPSF2	100	79.721	Choloepus_hoffmanni
ENSCVAG00000000095	cpsf2	100	85.425	ENSCPBG00000008766	CPSF2	97	85.298	Chrysemys_picta_bellii
ENSCVAG00000000095	cpsf2	100	53.043	ENSCING00000007881	-	100	52.475	Ciona_intestinalis
ENSCVAG00000000095	cpsf2	94	85.405	ENSCANG00000041651	CPSF2	100	85.250	Colobus_angolensis_palliatus
ENSCVAG00000000095	cpsf2	100	84.918	ENSCGRG00001006901	Cpsf2	100	84.791	Cricetulus_griseus_chok1gshd
ENSCVAG00000000095	cpsf2	100	84.918	ENSCGRG00000012416	Cpsf2	100	84.791	Cricetulus_griseus_crigri
ENSCVAG00000000095	cpsf2	100	92.766	ENSCSEG00000004116	cpsf2	100	92.766	Cynoglossus_semilaevis
ENSCVAG00000000095	cpsf2	100	87.848	ENSDARG00000028971	cpsf2	100	87.848	Danio_rerio
ENSCVAG00000000095	cpsf2	100	85.425	ENSDNOG00000042757	CPSF2	100	85.298	Dasypus_novemcinctus
ENSCVAG00000000095	cpsf2	100	85.425	ENSDORG00000013709	Cpsf2	100	85.298	Dipodomys_ordii
ENSCVAG00000000095	cpsf2	100	53.523	FBgn0027873	Cpsf100	100	53.160	Drosophila_melanogaster
ENSCVAG00000000095	cpsf2	100	77.595	ENSETEG00000012123	CPSF2	100	77.468	Echinops_telfairi
ENSCVAG00000000095	cpsf2	52	76.039	ENSEBUG00000012098	cpsf2	93	76.039	Eptatretus_burgeri
ENSCVAG00000000095	cpsf2	89	90.102	ENSEASG00005021193	CPSF2	100	90.102	Equus_asinus_asinus
ENSCVAG00000000095	cpsf2	100	85.298	ENSECAG00000023935	CPSF2	100	85.171	Equus_caballus
ENSCVAG00000000095	cpsf2	100	88.568	ENSELUG00000008442	cpsf2	100	88.442	Esox_lucius
ENSCVAG00000000095	cpsf2	100	85.298	ENSFCAG00000007886	CPSF2	100	85.171	Felis_catus
ENSCVAG00000000095	cpsf2	100	85.152	ENSFALG00000002412	CPSF2	100	85.152	Ficedula_albicollis
ENSCVAG00000000095	cpsf2	100	85.298	ENSFDAG00000006327	CPSF2	100	85.171	Fukomys_damarensis
ENSCVAG00000000095	cpsf2	96	96.723	ENSFHEG00000015465	cpsf2	98	96.723	Fundulus_heteroclitus
ENSCVAG00000000095	cpsf2	100	89.899	ENSGMOG00000008761	cpsf2	100	89.633	Gadus_morhua
ENSCVAG00000000095	cpsf2	100	85.533	ENSGALG00000010783	CPSF2	100	84.956	Gallus_gallus
ENSCVAG00000000095	cpsf2	100	98.221	ENSGAFG00000001407	cpsf2	100	98.221	Gambusia_affinis
ENSCVAG00000000095	cpsf2	100	94.536	ENSGACG00000008418	cpsf2	100	94.536	Gasterosteus_aculeatus
ENSCVAG00000000095	cpsf2	100	85.298	ENSGAGG00000008287	CPSF2	100	85.171	Gopherus_agassizii
ENSCVAG00000000095	cpsf2	100	85.298	ENSGGOG00000011799	CPSF2	100	85.171	Gorilla_gorilla
ENSCVAG00000000095	cpsf2	100	93.393	ENSHBUG00000023466	cpsf2	100	93.393	Haplochromis_burtoni
ENSCVAG00000000095	cpsf2	100	85.425	ENSHGLG00000018311	CPSF2	100	85.298	Heterocephalus_glaber_female
ENSCVAG00000000095	cpsf2	100	85.425	ENSHGLG00100016460	CPSF2	100	85.298	Heterocephalus_glaber_male
ENSCVAG00000000095	cpsf2	100	93.139	ENSHCOG00000019527	cpsf2	98	93.139	Hippocampus_comes
ENSCVAG00000000095	cpsf2	100	89.480	ENSIPUG00000020857	cpsf2	100	89.354	Ictalurus_punctatus
ENSCVAG00000000095	cpsf2	100	85.551	ENSSTOG00000009528	CPSF2	100	85.425	Ictidomys_tridecemlineatus
ENSCVAG00000000095	cpsf2	100	85.171	ENSJJAG00000017925	Cpsf2	100	85.044	Jaculus_jaculus
ENSCVAG00000000095	cpsf2	100	94.790	ENSKMAG00000019429	cpsf2	100	94.790	Kryptolebias_marmoratus
ENSCVAG00000000095	cpsf2	95	93.029	ENSLBEG00000011585	cpsf2	100	93.029	Labrus_bergylta
ENSCVAG00000000095	cpsf2	100	83.629	ENSLACG00000019024	CPSF2	100	83.629	Latimeria_chalumnae
ENSCVAG00000000095	cpsf2	100	88.481	ENSLOCG00000014102	cpsf2	100	88.481	Lepisosteus_oculatus
ENSCVAG00000000095	cpsf2	100	84.829	ENSLAFG00000004891	CPSF2	100	84.703	Loxodonta_africana
ENSCVAG00000000095	cpsf2	100	85.425	ENSMFAG00000041212	CPSF2	100	85.298	Macaca_fascicularis
ENSCVAG00000000095	cpsf2	100	85.425	ENSMMUG00000000699	CPSF2	100	85.298	Macaca_mulatta
ENSCVAG00000000095	cpsf2	100	85.425	ENSMNEG00000031584	CPSF2	100	85.298	Macaca_nemestrina
ENSCVAG00000000095	cpsf2	100	85.425	ENSMLEG00000029394	CPSF2	100	85.298	Mandrillus_leucophaeus
ENSCVAG00000000095	cpsf2	100	95.172	ENSMAMG00000004235	cpsf2	100	95.172	Mastacembelus_armatus
ENSCVAG00000000095	cpsf2	100	93.520	ENSMZEG00005001769	cpsf2	100	93.520	Maylandia_zebra
ENSCVAG00000000095	cpsf2	100	85.298	ENSMGAG00000013122	CPSF2	100	84.722	Meleagris_gallopavo
ENSCVAG00000000095	cpsf2	100	84.918	ENSMAUG00000015160	Cpsf2	100	84.791	Mesocricetus_auratus
ENSCVAG00000000095	cpsf2	100	85.425	ENSMICG00000016441	CPSF2	100	85.298	Microcebus_murinus
ENSCVAG00000000095	cpsf2	100	84.918	ENSMOCG00000015372	Cpsf2	100	84.791	Microtus_ochrogaster
ENSCVAG00000000095	cpsf2	100	88.056	ENSMMOG00000015590	cpsf2	100	88.056	Mola_mola
ENSCVAG00000000095	cpsf2	100	85.425	ENSMODG00000002042	CPSF2	100	85.298	Monodelphis_domestica
ENSCVAG00000000095	cpsf2	100	91.233	ENSMALG00000022275	cpsf2	100	91.233	Monopterus_albus
ENSCVAG00000000095	cpsf2	100	85.171	ENSMUSG00000041781	Cpsf2	100	85.044	Mus_musculus
ENSCVAG00000000095	cpsf2	100	85.044	MGP_PahariEiJ_G0029791	Cpsf2	100	84.918	Mus_pahari
ENSCVAG00000000095	cpsf2	100	85.171	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.044	Mus_spretus
ENSCVAG00000000095	cpsf2	100	85.425	ENSMPUG00000007617	CPSF2	98	85.298	Mustela_putorius_furo
ENSCVAG00000000095	cpsf2	100	84.918	ENSMLUG00000005570	CPSF2	100	84.791	Myotis_lucifugus
ENSCVAG00000000095	cpsf2	100	85.171	ENSNGAG00000020312	Cpsf2	100	85.044	Nannospalax_galili
ENSCVAG00000000095	cpsf2	100	93.901	ENSNBRG00000022402	cpsf2	100	93.901	Neolamprologus_brichardi
ENSCVAG00000000095	cpsf2	100	84.791	ENSNLEG00000017132	CPSF2	100	84.664	Nomascus_leucogenys
ENSCVAG00000000095	cpsf2	91	92.880	ENSMEUG00000008138	CPSF2	91	92.880	Notamacropus_eugenii
ENSCVAG00000000095	cpsf2	94	80.894	ENSOPRG00000008484	-	92	88.629	Ochotona_princeps
ENSCVAG00000000095	cpsf2	100	85.171	ENSODEG00000008682	CPSF2	100	85.044	Octodon_degus
ENSCVAG00000000095	cpsf2	100	93.647	ENSONIG00000005901	cpsf2	100	93.647	Oreochromis_niloticus
ENSCVAG00000000095	cpsf2	100	85.044	ENSOANG00000003822	CPSF2	100	84.918	Ornithorhynchus_anatinus
ENSCVAG00000000095	cpsf2	100	85.171	ENSOCUG00000005713	CPSF2	100	85.044	Oryctolagus_cuniculus
ENSCVAG00000000095	cpsf2	100	88.310	ENSORLG00000011628	cpsf2	100	88.310	Oryzias_latipes
ENSCVAG00000000095	cpsf2	100	94.155	ENSORLG00020016980	cpsf2	100	94.155	Oryzias_latipes_hni
ENSCVAG00000000095	cpsf2	100	94.155	ENSORLG00015011910	cpsf2	100	94.155	Oryzias_latipes_hsok
ENSCVAG00000000095	cpsf2	100	94.416	ENSOMEG00000022876	cpsf2	100	94.162	Oryzias_melastigma
ENSCVAG00000000095	cpsf2	100	82.427	ENSOARG00000012889	CPSF2	100	82.301	Ovis_aries
ENSCVAG00000000095	cpsf2	100	85.298	ENSPPAG00000039666	CPSF2	100	85.171	Pan_paniscus
ENSCVAG00000000095	cpsf2	99	85.279	ENSPPRG00000010869	CPSF2	100	85.152	Panthera_pardus
ENSCVAG00000000095	cpsf2	100	85.298	ENSPTIG00000021202	CPSF2	100	85.171	Panthera_tigris_altaica
ENSCVAG00000000095	cpsf2	100	85.298	ENSPTRG00000006651	CPSF2	100	85.171	Pan_troglodytes
ENSCVAG00000000095	cpsf2	100	85.425	ENSPANG00000017417	CPSF2	100	85.298	Papio_anubis
ENSCVAG00000000095	cpsf2	100	84.791	ENSPKIG00000021453	cpsf2	100	84.664	Paramormyrops_kingsleyae
ENSCVAG00000000095	cpsf2	100	84.918	ENSPSIG00000006289	CPSF2	100	84.791	Pelodiscus_sinensis
ENSCVAG00000000095	cpsf2	76	86.023	ENSPMGG00000002511	cpsf2	99	86.833	Periophthalmus_magnuspinnatus
ENSCVAG00000000095	cpsf2	100	85.298	ENSPEMG00000007917	Cpsf2	100	85.171	Peromyscus_maniculatus_bairdii
ENSCVAG00000000095	cpsf2	100	72.773	ENSPMAG00000006205	cpsf2	100	71.941	Petromyzon_marinus
ENSCVAG00000000095	cpsf2	100	85.425	ENSPCIG00000011393	CPSF2	100	85.298	Phascolarctos_cinereus
ENSCVAG00000000095	cpsf2	100	98.221	ENSPFOG00000018648	cpsf2	100	98.221	Poecilia_formosa
ENSCVAG00000000095	cpsf2	100	98.221	ENSPLAG00000019199	cpsf2	99	98.221	Poecilia_latipinna
ENSCVAG00000000095	cpsf2	96	98.283	ENSPMEG00000012100	cpsf2	100	98.123	Poecilia_mexicana
ENSCVAG00000000095	cpsf2	100	97.840	ENSPREG00000008960	cpsf2	100	97.840	Poecilia_reticulata
ENSCVAG00000000095	cpsf2	65	81.312	ENSPPYG00000029685	-	100	81.113	Pongo_abelii
ENSCVAG00000000095	cpsf2	100	85.044	ENSPCAG00000012477	CPSF2	100	84.918	Procavia_capensis
ENSCVAG00000000095	cpsf2	100	85.425	ENSPCOG00000026387	CPSF2	100	85.298	Propithecus_coquereli
ENSCVAG00000000095	cpsf2	65	90.217	ENSPVAG00000004223	CPSF2	65	90.816	Pteropus_vampyrus
ENSCVAG00000000095	cpsf2	100	93.147	ENSPNYG00000023356	cpsf2	100	93.147	Pundamilia_nyererei
ENSCVAG00000000095	cpsf2	100	90.368	ENSPNAG00000001849	cpsf2	100	90.241	Pygocentrus_nattereri
ENSCVAG00000000095	cpsf2	100	85.171	ENSRNOG00000005733	Cpsf2	100	85.044	Rattus_norvegicus
ENSCVAG00000000095	cpsf2	100	85.425	ENSRBIG00000044792	CPSF2	100	85.298	Rhinopithecus_bieti
ENSCVAG00000000095	cpsf2	100	85.425	ENSRROG00000034875	CPSF2	100	85.298	Rhinopithecus_roxellana
ENSCVAG00000000095	cpsf2	100	85.551	ENSSBOG00000024571	CPSF2	100	85.425	Saimiri_boliviensis_boliviensis
ENSCVAG00000000095	cpsf2	100	85.551	ENSSHAG00000010458	CPSF2	100	85.425	Sarcophilus_harrisii
ENSCVAG00000000095	cpsf2	100	90.621	ENSSFOG00015002117	cpsf2	100	90.621	Scleropages_formosus
ENSCVAG00000000095	cpsf2	100	93.274	ENSSMAG00000002001	cpsf2	100	93.909	Scophthalmus_maximus
ENSCVAG00000000095	cpsf2	100	95.172	ENSSDUG00000004084	cpsf2	100	95.172	Seriola_dumerili
ENSCVAG00000000095	cpsf2	100	94.790	ENSSLDG00000024330	cpsf2	100	94.790	Seriola_lalandi_dorsalis
ENSCVAG00000000095	cpsf2	58	93.069	ENSSARG00000009784	-	63	93.069	Sorex_araneus
ENSCVAG00000000095	cpsf2	100	85.171	ENSSPUG00000013485	CPSF2	100	85.044	Sphenodon_punctatus
ENSCVAG00000000095	cpsf2	100	94.536	ENSSPAG00000013284	cpsf2	100	94.536	Stegastes_partitus
ENSCVAG00000000095	cpsf2	100	85.171	ENSSSCG00000002447	CPSF2	100	85.044	Sus_scrofa
ENSCVAG00000000095	cpsf2	100	85.279	ENSTGUG00000012571	-	100	85.279	Taeniopygia_guttata
ENSCVAG00000000095	cpsf2	100	92.503	ENSTRUG00000003742	cpsf2	100	92.503	Takifugu_rubripes
ENSCVAG00000000095	cpsf2	100	91.128	ENSTNIG00000012228	cpsf2	100	92.015	Tetraodon_nigroviridis
ENSCVAG00000000095	cpsf2	91	83.188	ENSTBEG00000004530	CPSF2	88	87.637	Tupaia_belangeri
ENSCVAG00000000095	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSCVAG00000000095	cpsf2	100	85.425	ENSUAMG00000028071	CPSF2	100	85.298	Ursus_americanus
ENSCVAG00000000095	cpsf2	100	85.425	ENSUMAG00000005029	CPSF2	99	89.614	Ursus_maritimus
ENSCVAG00000000095	cpsf2	99	85.279	ENSVPAG00000003503	CPSF2	100	85.152	Vicugna_pacos
ENSCVAG00000000095	cpsf2	100	85.298	ENSVVUG00000024642	CPSF2	100	85.171	Vulpes_vulpes
ENSCVAG00000000095	cpsf2	100	83.904	ENSXETG00000010289	cpsf2	100	83.777	Xenopus_tropicalis
ENSCVAG00000000095	cpsf2	100	97.840	ENSXCOG00000001764	cpsf2	100	97.840	Xiphophorus_couchianus
ENSCVAG00000000095	cpsf2	100	98.475	ENSXMAG00000017048	cpsf2	100	98.475	Xiphophorus_maculatus