EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000000113 (Gene tree)
Gene ID: 107087793
Gene Symbol: zmat4a
Alias: si:dkey-173g15.1
Full Name: zinc finger matrin-type 4
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 210705 bases
Position: chrKL652694.1:63592-274296
Accession: 107087793
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000002812	zf-met	PF12874.7	1.2e-31	1	4
ENSCVAP00000002812	zf-met	PF12874.7	1.2e-31	2	4
ENSCVAP00000002812	zf-met	PF12874.7	1.2e-31	3	4
ENSCVAP00000002812	zf-met	PF12874.7	1.2e-31	4	4
ENSCVAP00000002812	zf-C2H2_jaz	PF12171.8	1.9e-24	1	2
ENSCVAP00000002812	zf-C2H2_jaz	PF12171.8	1.9e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000011090	-	1266	XM_015379550	ENSCVAP00000002812	260 (aa)	XP_015235036	UPI0007426492

Gene Model

Click here to download ENSCVAG00000000113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000000113	zmat4a	85	63.717	ENSCVAG00000013606	zgc:171482	99	63.717
ENSCVAG00000000113	zmat4a	83	45.662	ENSCVAG00000022651	-	66	45.662
ENSCVAG00000000113	zmat4a	81	35.849	ENSCVAG00000011847	zmat3	91	34.711

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000113	zmat4a	87	75.652	ENSG00000165061	ZMAT4	100	75.652	Homo_sapiens
ENSCVAG00000000113	zmat4a	76	76.263	ENSAPOG00000007448	zmat4a	97	76.263	Acanthochromis_polyacanthus
ENSCVAG00000000113	zmat4a	85	74.554	ENSAMEG00000002758	ZMAT4	99	74.554	Ailuropoda_melanoleuca
ENSCVAG00000000113	zmat4a	86	90.090	ENSACIG00000009080	zmat4a	99	90.090	Amphilophus_citrinellus
ENSCVAG00000000113	zmat4a	100	94.231	ENSAOCG00000004416	zmat4a	100	94.231	Amphiprion_ocellaris
ENSCVAG00000000113	zmat4a	100	93.846	ENSAPEG00000018565	zmat4a	100	93.846	Amphiprion_percula
ENSCVAG00000000113	zmat4a	97	92.829	ENSATEG00000012630	zmat4a	95	92.829	Anabas_testudineus
ENSCVAG00000000113	zmat4a	87	76.856	ENSAPLG00000006106	ZMAT4	100	76.856	Anas_platyrhynchos
ENSCVAG00000000113	zmat4a	90	75.243	ENSACAG00000005388	ZMAT4	97	75.243	Anolis_carolinensis
ENSCVAG00000000113	zmat4a	87	75.652	ENSANAG00000027926	ZMAT4	100	75.652	Aotus_nancymaae
ENSCVAG00000000113	zmat4a	100	91.923	ENSACLG00000005038	zmat4a	100	91.923	Astatotilapia_calliptera
ENSCVAG00000000113	zmat4a	85	88.739	ENSAMXG00000035337	zmat4a	99	88.739	Astyanax_mexicanus
ENSCVAG00000000113	zmat4a	87	74.348	ENSBTAG00000017420	ZMAT4	100	74.348	Bos_taurus
ENSCVAG00000000113	zmat4a	87	73.913	ENSCAFG00000005744	ZMAT4	100	73.913	Canis_familiaris
ENSCVAG00000000113	zmat4a	60	69.375	ENSCAFG00020002716	ZMAT4	93	69.375	Canis_lupus_dingo
ENSCVAG00000000113	zmat4a	87	73.593	ENSCHIG00000022017	ZMAT4	100	73.593	Capra_hircus
ENSCVAG00000000113	zmat4a	63	71.687	ENSTSYG00000031413	ZMAT4	100	71.687	Carlito_syrichta
ENSCVAG00000000113	zmat4a	87	74.348	ENSCAPG00000014401	ZMAT4	100	74.348	Cavia_aperea
ENSCVAG00000000113	zmat4a	87	74.348	ENSCPOG00000015224	ZMAT4	100	74.348	Cavia_porcellus
ENSCVAG00000000113	zmat4a	87	75.652	ENSCCAG00000027437	ZMAT4	100	75.652	Cebus_capucinus
ENSCVAG00000000113	zmat4a	87	75.652	ENSCATG00000044978	ZMAT4	100	75.652	Cercocebus_atys
ENSCVAG00000000113	zmat4a	87	74.783	ENSCLAG00000000923	ZMAT4	100	74.783	Chinchilla_lanigera
ENSCVAG00000000113	zmat4a	85	75.556	ENSCSAG00000015108	ZMAT4	100	75.556	Chlorocebus_sabaeus
ENSCVAG00000000113	zmat4a	87	63.158	ENSCHOG00000003755	ZMAT4	100	63.158	Choloepus_hoffmanni
ENSCVAG00000000113	zmat4a	74	73.469	ENSCANG00000032136	ZMAT4	100	73.469	Colobus_angolensis_palliatus
ENSCVAG00000000113	zmat4a	87	74.348	ENSCGRG00001016583	Zmat4	100	74.348	Cricetulus_griseus_chok1gshd
ENSCVAG00000000113	zmat4a	87	74.348	ENSCGRG00000002696	Zmat4	100	74.348	Cricetulus_griseus_crigri
ENSCVAG00000000113	zmat4a	100	89.615	ENSCSEG00000013707	zmat4a	100	93.191	Cynoglossus_semilaevis
ENSCVAG00000000113	zmat4a	100	86.207	ENSDARG00000092987	zmat4a	99	88.789	Danio_rerio
ENSCVAG00000000113	zmat4a	85	79.911	ENSDARG00000061419	zmat4b	99	79.911	Danio_rerio
ENSCVAG00000000113	zmat4a	85	73.128	ENSDNOG00000001045	ZMAT4	100	73.128	Dasypus_novemcinctus
ENSCVAG00000000113	zmat4a	87	74.672	ENSDORG00000009300	Zmat4	100	74.672	Dipodomys_ordii
ENSCVAG00000000113	zmat4a	60	72.956	ENSETEG00000010474	ZMAT4	81	72.956	Echinops_telfairi
ENSCVAG00000000113	zmat4a	87	74.348	ENSEASG00005010447	ZMAT4	100	74.348	Equus_asinus_asinus
ENSCVAG00000000113	zmat4a	87	74.348	ENSECAG00000021550	ZMAT4	100	74.348	Equus_caballus
ENSCVAG00000000113	zmat4a	85	62.996	ENSEEUG00000002565	ZMAT4	100	62.996	Erinaceus_europaeus
ENSCVAG00000000113	zmat4a	100	89.615	ENSELUG00000005097	zmat4a	100	89.615	Esox_lucius
ENSCVAG00000000113	zmat4a	87	74.783	ENSFCAG00000012775	ZMAT4	100	74.783	Felis_catus
ENSCVAG00000000113	zmat4a	87	78.070	ENSFALG00000006455	ZMAT4	100	78.070	Ficedula_albicollis
ENSCVAG00000000113	zmat4a	87	72.926	ENSFDAG00000015258	ZMAT4	97	72.926	Fukomys_damarensis
ENSCVAG00000000113	zmat4a	86	91.441	ENSFHEG00000022872	zmat4b	99	91.441	Fundulus_heteroclitus
ENSCVAG00000000113	zmat4a	85	90.541	ENSGMOG00000007950	zmat4a	100	90.541	Gadus_morhua
ENSCVAG00000000113	zmat4a	87	77.193	ENSGALG00000003470	ZMAT4	100	77.193	Gallus_gallus
ENSCVAG00000000113	zmat4a	100	93.462	ENSGAFG00000013149	zmat4a	100	93.462	Gambusia_affinis
ENSCVAG00000000113	zmat4a	87	94.273	ENSGACG00000005515	zmat4a	100	94.273	Gasterosteus_aculeatus
ENSCVAG00000000113	zmat4a	87	79.039	ENSGAGG00000004799	ZMAT4	100	79.039	Gopherus_agassizii
ENSCVAG00000000113	zmat4a	87	75.652	ENSGGOG00000006633	ZMAT4	100	75.652	Gorilla_gorilla
ENSCVAG00000000113	zmat4a	100	92.308	ENSHBUG00000012634	zmat4a	100	92.308	Haplochromis_burtoni
ENSCVAG00000000113	zmat4a	87	73.799	ENSHGLG00000003246	ZMAT4	100	73.799	Heterocephalus_glaber_female
ENSCVAG00000000113	zmat4a	60	71.519	ENSHGLG00100000081	ZMAT4	100	71.519	Heterocephalus_glaber_male
ENSCVAG00000000113	zmat4a	100	80.385	ENSIPUG00000022248	zmat4	100	80.385	Ictalurus_punctatus
ENSCVAG00000000113	zmat4a	87	72.845	ENSJJAG00000013484	Zmat4	100	72.845	Jaculus_jaculus
ENSCVAG00000000113	zmat4a	88	75.217	ENSLACG00000006206	-	99	75.217	Latimeria_chalumnae
ENSCVAG00000000113	zmat4a	53	55.034	ENSLACG00000005109	-	92	55.034	Latimeria_chalumnae
ENSCVAG00000000113	zmat4a	98	87.451	ENSLOCG00000015435	zmat4b	99	91.071	Lepisosteus_oculatus
ENSCVAG00000000113	zmat4a	85	75.221	ENSLAFG00000014753	ZMAT4	100	75.221	Loxodonta_africana
ENSCVAG00000000113	zmat4a	87	75.652	ENSMFAG00000043475	ZMAT4	100	75.652	Macaca_fascicularis
ENSCVAG00000000113	zmat4a	74	73.469	ENSMMUG00000000776	ZMAT4	100	73.469	Macaca_mulatta
ENSCVAG00000000113	zmat4a	87	75.652	ENSMNEG00000042102	ZMAT4	100	75.652	Macaca_nemestrina
ENSCVAG00000000113	zmat4a	87	75.652	ENSMLEG00000034448	ZMAT4	100	75.652	Mandrillus_leucophaeus
ENSCVAG00000000113	zmat4a	100	91.538	ENSMAMG00000019914	zmat4a	94	91.538	Mastacembelus_armatus
ENSCVAG00000000113	zmat4a	100	92.308	ENSMZEG00005004946	zmat4a	100	92.308	Maylandia_zebra
ENSCVAG00000000113	zmat4a	87	75.000	ENSMGAG00000002288	ZMAT4	99	75.000	Meleagris_gallopavo
ENSCVAG00000000113	zmat4a	74	71.429	ENSMICG00000047837	ZMAT4	100	71.429	Microcebus_murinus
ENSCVAG00000000113	zmat4a	87	74.348	ENSMOCG00000015996	Zmat4	100	74.348	Microtus_ochrogaster
ENSCVAG00000000113	zmat4a	100	91.923	ENSMMOG00000012619	zmat4a	97	91.923	Mola_mola
ENSCVAG00000000113	zmat4a	73	74.227	ENSMODG00000010499	ZMAT4	97	74.227	Monodelphis_domestica
ENSCVAG00000000113	zmat4a	100	91.923	ENSMALG00000015056	zmat4a	100	91.923	Monopterus_albus
ENSCVAG00000000113	zmat4a	87	74.783	MGP_CAROLIEiJ_G0030909	Zmat4	100	86.458	Mus_caroli
ENSCVAG00000000113	zmat4a	87	74.783	ENSMUSG00000037492	Zmat4	100	86.458	Mus_musculus
ENSCVAG00000000113	zmat4a	87	74.783	MGP_PahariEiJ_G0021380	Zmat4	100	86.458	Mus_pahari
ENSCVAG00000000113	zmat4a	87	74.783	MGP_SPRETEiJ_G0032028	Zmat4	100	86.458	Mus_spretus
ENSCVAG00000000113	zmat4a	87	73.246	ENSMPUG00000005832	ZMAT4	80	73.246	Mustela_putorius_furo
ENSCVAG00000000113	zmat4a	50	67.910	ENSMLUG00000014209	ZMAT4	100	67.910	Myotis_lucifugus
ENSCVAG00000000113	zmat4a	87	73.362	ENSNGAG00000015545	Zmat4	100	73.362	Nannospalax_galili
ENSCVAG00000000113	zmat4a	85	91.892	ENSNBRG00000011844	zmat4a	99	91.892	Neolamprologus_brichardi
ENSCVAG00000000113	zmat4a	87	75.652	ENSNLEG00000012564	ZMAT4	100	75.652	Nomascus_leucogenys
ENSCVAG00000000113	zmat4a	85	74.449	ENSMEUG00000000558	ZMAT4	100	74.449	Notamacropus_eugenii
ENSCVAG00000000113	zmat4a	87	74.783	ENSOPRG00000009257	ZMAT4	100	74.783	Ochotona_princeps
ENSCVAG00000000113	zmat4a	87	74.672	ENSODEG00000006439	ZMAT4	100	74.672	Octodon_degus
ENSCVAG00000000113	zmat4a	82	38.057	ENSONIG00000020374	-	50	38.057	Oreochromis_niloticus
ENSCVAG00000000113	zmat4a	70	86.559	ENSONIG00000016086	zmat4a	100	86.559	Oreochromis_niloticus
ENSCVAG00000000113	zmat4a	83	85.841	ENSOANG00000022431	ZMAT4	100	85.841	Ornithorhynchus_anatinus
ENSCVAG00000000113	zmat4a	87	74.783	ENSOCUG00000000977	ZMAT4	100	74.783	Oryctolagus_cuniculus
ENSCVAG00000000113	zmat4a	56	90.345	ENSORLG00000016169	zmat4b	79	96.552	Oryzias_latipes
ENSCVAG00000000113	zmat4a	100	90.114	ENSORLG00020019602	zmat4a	100	93.162	Oryzias_latipes_hni
ENSCVAG00000000113	zmat4a	100	90.114	ENSORLG00015009006	zmat4a	100	93.162	Oryzias_latipes_hsok
ENSCVAG00000000113	zmat4a	100	88.593	ENSOMEG00000003441	zmat4a	87	90.114	Oryzias_melastigma
ENSCVAG00000000113	zmat4a	85	74.107	ENSOGAG00000012558	ZMAT4	100	74.107	Otolemur_garnettii
ENSCVAG00000000113	zmat4a	85	73.778	ENSOARG00000002354	ZMAT4	84	73.778	Ovis_aries
ENSCVAG00000000113	zmat4a	85	75.111	ENSPPAG00000042573	ZMAT4	99	75.111	Pan_paniscus
ENSCVAG00000000113	zmat4a	87	74.348	ENSPPRG00000007023	ZMAT4	100	74.348	Panthera_pardus
ENSCVAG00000000113	zmat4a	87	74.348	ENSPTIG00000019738	ZMAT4	100	74.348	Panthera_tigris_altaica
ENSCVAG00000000113	zmat4a	87	75.217	ENSPTRG00000020191	ZMAT4	100	75.217	Pan_troglodytes
ENSCVAG00000000113	zmat4a	87	75.652	ENSPANG00000014196	ZMAT4	100	75.652	Papio_anubis
ENSCVAG00000000113	zmat4a	85	64.286	ENSPKIG00000021792	zmat4b	99	64.286	Paramormyrops_kingsleyae
ENSCVAG00000000113	zmat4a	100	83.462	ENSPKIG00000000048	zmat4a	100	83.462	Paramormyrops_kingsleyae
ENSCVAG00000000113	zmat4a	87	79.476	ENSPSIG00000004847	ZMAT4	100	79.476	Pelodiscus_sinensis
ENSCVAG00000000113	zmat4a	86	82.589	ENSPMGG00000001436	zmat4b	99	82.589	Periophthalmus_magnuspinnatus
ENSCVAG00000000113	zmat4a	85	53.540	ENSPMAG00000004582	zmat4a	97	53.540	Petromyzon_marinus
ENSCVAG00000000113	zmat4a	88	76.395	ENSPCIG00000028706	ZMAT4	93	76.395	Phascolarctos_cinereus
ENSCVAG00000000113	zmat4a	100	94.231	ENSPFOG00000006742	zmat4a	100	94.231	Poecilia_formosa
ENSCVAG00000000113	zmat4a	97	94.024	ENSPLAG00000019268	zmat4a	99	94.024	Poecilia_latipinna
ENSCVAG00000000113	zmat4a	100	94.231	ENSPMEG00000007870	zmat4a	100	96.537	Poecilia_mexicana
ENSCVAG00000000113	zmat4a	100	94.231	ENSPREG00000014914	zmat4a	100	94.231	Poecilia_reticulata
ENSCVAG00000000113	zmat4a	87	75.652	ENSPPYG00000018540	ZMAT4	100	75.652	Pongo_abelii
ENSCVAG00000000113	zmat4a	87	73.478	ENSPCAG00000004820	ZMAT4	100	73.478	Procavia_capensis
ENSCVAG00000000113	zmat4a	87	74.783	ENSPCOG00000007717	ZMAT4	100	74.783	Propithecus_coquereli
ENSCVAG00000000113	zmat4a	73	75.130	ENSPVAG00000011393	ZMAT4	84	75.130	Pteropus_vampyrus
ENSCVAG00000000113	zmat4a	100	91.154	ENSPNYG00000006173	zmat4a	92	91.154	Pundamilia_nyererei
ENSCVAG00000000113	zmat4a	100	86.923	ENSPNAG00000009604	zmat4a	100	86.923	Pygocentrus_nattereri
ENSCVAG00000000113	zmat4a	87	73.684	ENSPNAG00000023764	zmat4b	100	73.684	Pygocentrus_nattereri
ENSCVAG00000000113	zmat4a	87	74.026	ENSRNOG00000042690	Zmat4	100	74.026	Rattus_norvegicus
ENSCVAG00000000113	zmat4a	87	75.652	ENSRBIG00000031887	ZMAT4	100	75.652	Rhinopithecus_bieti
ENSCVAG00000000113	zmat4a	87	75.652	ENSRROG00000040877	ZMAT4	100	75.652	Rhinopithecus_roxellana
ENSCVAG00000000113	zmat4a	87	75.652	ENSSBOG00000017391	ZMAT4	100	75.652	Saimiri_boliviensis_boliviensis
ENSCVAG00000000113	zmat4a	70	65.700	ENSSHAG00000011847	ZMAT4	100	65.700	Sarcophilus_harrisii
ENSCVAG00000000113	zmat4a	63	85.437	ENSSFOG00015015440	zmat4b	84	85.437	Scleropages_formosus
ENSCVAG00000000113	zmat4a	100	86.923	ENSSFOG00015013158	zmat4	100	86.923	Scleropages_formosus
ENSCVAG00000000113	zmat4a	100	93.846	ENSSMAG00000017693	zmat4a	99	91.964	Scophthalmus_maximus
ENSCVAG00000000113	zmat4a	100	94.231	ENSSDUG00000005878	zmat4a	100	94.231	Seriola_dumerili
ENSCVAG00000000113	zmat4a	100	94.231	ENSSLDG00000012934	zmat4a	100	94.231	Seriola_lalandi_dorsalis
ENSCVAG00000000113	zmat4a	87	67.686	ENSSARG00000003679	ZMAT4	100	67.686	Sorex_araneus
ENSCVAG00000000113	zmat4a	97	93.227	ENSSPAG00000021408	zmat4a	94	93.227	Stegastes_partitus
ENSCVAG00000000113	zmat4a	87	73.707	ENSSSCG00000007010	ZMAT4	100	73.707	Sus_scrofa
ENSCVAG00000000113	zmat4a	85	77.533	ENSTGUG00000005159	ZMAT4	100	77.533	Taeniopygia_guttata
ENSCVAG00000000113	zmat4a	100	90.385	ENSTRUG00000005170	zmat4a	86	90.385	Takifugu_rubripes
ENSCVAG00000000113	zmat4a	85	73.451	ENSTNIG00000018863	zmat4b	99	73.451	Tetraodon_nigroviridis
ENSCVAG00000000113	zmat4a	87	63.478	ENSTBEG00000016172	ZMAT4	100	63.478	Tupaia_belangeri
ENSCVAG00000000113	zmat4a	87	68.996	ENSTTRG00000009606	ZMAT4	100	68.996	Tursiops_truncatus
ENSCVAG00000000113	zmat4a	85	74.554	ENSUMAG00000025578	ZMAT4	99	74.554	Ursus_maritimus
ENSCVAG00000000113	zmat4a	87	65.652	ENSVPAG00000009783	ZMAT4	100	65.652	Vicugna_pacos
ENSCVAG00000000113	zmat4a	87	74.348	ENSVVUG00000020407	ZMAT4	100	74.348	Vulpes_vulpes
ENSCVAG00000000113	zmat4a	85	39.827	ENSXCOG00000010189	-	99	40.598	Xiphophorus_couchianus
ENSCVAG00000000113	zmat4a	100	93.846	ENSXMAG00000010461	zmat4a	100	93.846	Xiphophorus_maculatus