EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000000161 (Gene tree)
Gene ID: 107084503
Gene Symbol: -
Alias: -
Full Name: zinc finger protein with KRAB and SCAN domains 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 3539 bases
Position: chrKL652601.1:384915-388453
Accession: 107084503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004245	zf-C2H2	PF00096.26	1.6e-18	1	3
ENSCVAP00000004245	zf-C2H2	PF00096.26	1.6e-18	2	3
ENSCVAP00000004245	zf-C2H2	PF00096.26	1.6e-18	3	3
ENSCVAP00000004245	zf-met	PF12874.7	3.1e-08	1	2
ENSCVAP00000004245	zf-met	PF12874.7	3.1e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000008673	-	1770	XM_015374390	ENSCVAP00000004245	290 (aa)	XP_015229876	UPI000742597F

Gene Model

Click here to download ENSCVAG00000000161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000000161	-	81	43.678	ENSCVAG00000001767	-	94	43.678
ENSCVAG00000000161	-	99	38.889	ENSCVAG00000004508	-	99	38.889
ENSCVAG00000000161	-	74	38.202	ENSCVAG00000006491	-	83	38.202
ENSCVAG00000000161	-	98	45.455	ENSCVAG00000013337	-	94	45.455
ENSCVAG00000000161	-	50	41.379	ENSCVAG00000012682	-	65	41.379
ENSCVAG00000000161	-	53	42.045	ENSCVAG00000012180	-	89	44.615
ENSCVAG00000000161	-	98	43.820	ENSCVAG00000020414	-	99	43.820
ENSCVAG00000000161	-	77	40.698	ENSCVAG00000002307	-	94	40.698
ENSCVAG00000000161	-	100	47.191	ENSCVAG00000007073	-	93	47.191
ENSCVAG00000000161	-	98	30.612	ENSCVAG00000006484	-	71	30.612
ENSCVAG00000000161	-	77	41.489	ENSCVAG00000010160	-	77	41.489

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000161	-	98	31.596	ENSAPOG00000021966	-	99	34.118	Acanthochromis_polyacanthus
ENSCVAG00000000161	-	98	32.000	ENSAOCG00000020652	-	100	32.000	Amphiprion_ocellaris
ENSCVAG00000000161	-	98	32.131	ENSAOCG00000022529	-	100	34.118	Amphiprion_ocellaris
ENSCVAG00000000161	-	99	65.517	ENSAOCG00000001971	-	100	65.517	Amphiprion_ocellaris
ENSCVAG00000000161	-	51	40.625	ENSAPEG00000006572	-	53	40.625	Amphiprion_percula
ENSCVAG00000000161	-	87	37.349	ENSAPEG00000009553	-	83	37.349	Amphiprion_percula
ENSCVAG00000000161	-	99	65.862	ENSAPEG00000011156	-	86	65.862	Amphiprion_percula
ENSCVAG00000000161	-	97	37.931	ENSATEG00000021056	-	98	37.931	Anabas_testudineus
ENSCVAG00000000161	-	82	35.417	ENSACLG00000006718	-	98	35.417	Astatotilapia_calliptera
ENSCVAG00000000161	-	82	35.417	ENSACLG00000020333	-	98	35.417	Astatotilapia_calliptera
ENSCVAG00000000161	-	98	32.941	ENSACLG00000008374	-	99	32.941	Astatotilapia_calliptera
ENSCVAG00000000161	-	99	73.103	ENSFHEG00000003856	-	99	73.103	Fundulus_heteroclitus
ENSCVAG00000000161	-	99	74.048	ENSGAFG00000000549	-	99	74.048	Gambusia_affinis
ENSCVAG00000000161	-	68	39.091	ENSHBUG00000013065	-	82	39.091	Haplochromis_burtoni
ENSCVAG00000000161	-	98	32.941	ENSHBUG00000017924	-	99	32.941	Haplochromis_burtoni
ENSCVAG00000000161	-	98	38.095	ENSHCOG00000020309	-	97	38.095	Hippocampus_comes
ENSCVAG00000000161	-	99	30.719	ENSLBEG00000008850	-	78	30.719	Labrus_bergylta
ENSCVAG00000000161	-	98	32.941	ENSMZEG00005011431	-	99	32.941	Maylandia_zebra
ENSCVAG00000000161	-	74	39.091	ENSMZEG00005011812	-	82	39.091	Maylandia_zebra
ENSCVAG00000000161	-	76	35.052	ENSMZEG00005025965	-	83	35.052	Maylandia_zebra
ENSCVAG00000000161	-	59	41.573	ENSMALG00000010959	-	94	41.573	Monopterus_albus
ENSCVAG00000000161	-	97	43.182	ENSMALG00000005696	-	99	43.182	Monopterus_albus
ENSCVAG00000000161	-	99	61.512	ENSMALG00000012840	-	99	61.512	Monopterus_albus
ENSCVAG00000000161	-	98	32.530	ENSNBRG00000004792	-	98	32.530	Neolamprologus_brichardi
ENSCVAG00000000161	-	98	39.437	ENSPMGG00000011591	-	99	39.437	Periophthalmus_magnuspinnatus
ENSCVAG00000000161	-	98	47.458	ENSPMGG00000001672	-	93	47.458	Periophthalmus_magnuspinnatus
ENSCVAG00000000161	-	99	73.356	ENSPMEG00000004752	-	99	73.356	Poecilia_mexicana
ENSCVAG00000000161	-	98	32.941	ENSPNYG00000016157	-	99	32.941	Pundamilia_nyererei
ENSCVAG00000000161	-	100	42.353	ENSSMAG00000006155	-	97	42.353	Scophthalmus_maximus
ENSCVAG00000000161	-	98	31.699	ENSSMAG00000006902	-	91	31.699	Scophthalmus_maximus
ENSCVAG00000000161	-	98	40.909	ENSSDUG00000022035	-	99	40.909	Seriola_dumerili
ENSCVAG00000000161	-	98	40.909	ENSSLDG00000025676	-	99	40.909	Seriola_lalandi_dorsalis
ENSCVAG00000000161	-	97	33.681	ENSTRUG00000024009	-	100	33.681	Takifugu_rubripes
ENSCVAG00000000161	-	99	49.158	ENSTRUG00000021167	-	99	50.512	Takifugu_rubripes
ENSCVAG00000000161	-	99	74.394	ENSXMAG00000028660	-	99	74.394	Xiphophorus_maculatus