EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000000392 (Gene tree)
Gene ID: 107104242
Gene Symbol: rpusd4 (1 of many)
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridylate synthase domain-containing protein 4-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5463 bases
Position: chrKL654163.1:105764-111226
Accession: 107104242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012745	PseudoU_synth_2	PF00849.22	6.5e-26	1	1
ENSCVAP00000012739	PseudoU_synth_2	PF00849.22	8.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000030458	-	1170	XM_015404204	ENSCVAP00000012739	389 (aa)	XP_015259690	-
ENSCVAT00000020090	-	1056	-	ENSCVAP00000012745	351 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000000392's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000392's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000000392	rpusd4	100	98.972	ENSCVAG00000008761	rpusd4	99	98.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000392	rpusd4	92	51.376	ENSG00000165526	RPUSD4	87	50.904	Homo_sapiens
ENSCVAG00000000392	rpusd4	98	73.410	ENSAPOG00000011024	rpusd4	98	68.274	Acanthochromis_polyacanthus
ENSCVAG00000000392	rpusd4	64	57.000	ENSAMEG00000005953	-	95	57.000	Ailuropoda_melanoleuca
ENSCVAG00000000392	rpusd4	98	49.711	ENSAMEG00000000127	-	89	49.711	Ailuropoda_melanoleuca
ENSCVAG00000000392	rpusd4	93	72.393	ENSACIG00000003533	rpusd4	96	72.393	Amphilophus_citrinellus
ENSCVAG00000000392	rpusd4	98	73.837	ENSAOCG00000015409	rpusd4	97	68.448	Amphiprion_ocellaris
ENSCVAG00000000392	rpusd4	98	73.837	ENSAPEG00000018935	rpusd4	97	68.448	Amphiprion_percula
ENSCVAG00000000392	rpusd4	98	72.754	ENSATEG00000008059	rpusd4	97	67.766	Anabas_testudineus
ENSCVAG00000000392	rpusd4	79	53.191	ENSAPLG00000013250	RPUSD4	96	53.357	Anas_platyrhynchos
ENSCVAG00000000392	rpusd4	93	52.280	ENSACAG00000000189	RPUSD4	89	52.280	Anolis_carolinensis
ENSCVAG00000000392	rpusd4	95	49.112	ENSANAG00000024050	RPUSD4	89	49.112	Aotus_nancymaae
ENSCVAG00000000392	rpusd4	98	74.419	ENSACLG00000020996	rpusd4	96	71.164	Astatotilapia_calliptera
ENSCVAG00000000392	rpusd4	98	59.026	ENSAMXG00000031479	rpusd4	95	60.294	Astyanax_mexicanus
ENSCVAG00000000392	rpusd4	97	49.565	ENSBTAG00000020900	RPUSD4	88	49.565	Bos_taurus
ENSCVAG00000000392	rpusd4	94	49.398	ENSCJAG00000042850	RPUSD4	82	49.398	Callithrix_jacchus
ENSCVAG00000000392	rpusd4	98	51.445	ENSCAFG00000010488	RPUSD4	88	51.445	Canis_familiaris
ENSCVAG00000000392	rpusd4	98	51.445	ENSCAFG00020010621	RPUSD4	88	51.445	Canis_lupus_dingo
ENSCVAG00000000392	rpusd4	92	50.307	ENSCHIG00000009975	RPUSD4	88	49.275	Capra_hircus
ENSCVAG00000000392	rpusd4	99	50.427	ENSTSYG00000008456	RPUSD4	89	51.479	Carlito_syrichta
ENSCVAG00000000392	rpusd4	69	48.980	ENSCAPG00000006040	RPUSD4	93	48.980	Cavia_aperea
ENSCVAG00000000392	rpusd4	95	51.479	ENSCPOG00000014971	RPUSD4	88	51.479	Cavia_porcellus
ENSCVAG00000000392	rpusd4	95	49.267	ENSCCAG00000027838	RPUSD4	90	49.267	Cebus_capucinus
ENSCVAG00000000392	rpusd4	99	47.293	ENSCATG00000041570	RPUSD4	89	47.293	Cercocebus_atys
ENSCVAG00000000392	rpusd4	95	52.226	ENSCLAG00000016553	RPUSD4	88	52.226	Chinchilla_lanigera
ENSCVAG00000000392	rpusd4	99	47.863	ENSCSAG00000002274	RPUSD4	89	47.863	Chlorocebus_sabaeus
ENSCVAG00000000392	rpusd4	77	52.941	ENSCHOG00000010249	RPUSD4	94	52.941	Choloepus_hoffmanni
ENSCVAG00000000392	rpusd4	81	56.747	ENSCPBG00000011175	RPUSD4	99	56.747	Chrysemys_picta_bellii
ENSCVAG00000000392	rpusd4	91	36.527	ENSCSAVG00000000872	-	63	36.527	Ciona_savignyi
ENSCVAG00000000392	rpusd4	99	47.863	ENSCANG00000039684	RPUSD4	89	47.863	Colobus_angolensis_palliatus
ENSCVAG00000000392	rpusd4	95	52.071	ENSCGRG00001024141	Rpusd4	91	49.725	Cricetulus_griseus_chok1gshd
ENSCVAG00000000392	rpusd4	95	52.071	ENSCGRG00000014415	Rpusd4	91	49.725	Cricetulus_griseus_crigri
ENSCVAG00000000392	rpusd4	55	59.898	ENSCSEG00000006462	-	86	59.898	Cynoglossus_semilaevis
ENSCVAG00000000392	rpusd4	97	56.686	ENSDARG00000012674	rpusd4	96	56.977	Danio_rerio
ENSCVAG00000000392	rpusd4	95	49.853	ENSDNOG00000020026	RPUSD4	89	49.853	Dasypus_novemcinctus
ENSCVAG00000000392	rpusd4	95	49.852	ENSDORG00000016717	Rpusd4	88	49.852	Dipodomys_ordii
ENSCVAG00000000392	rpusd4	95	51.032	ENSETEG00000013953	RPUSD4	89	51.032	Echinops_telfairi
ENSCVAG00000000392	rpusd4	95	50.445	ENSEASG00005022982	RPUSD4	88	50.445	Equus_asinus_asinus
ENSCVAG00000000392	rpusd4	99	49.857	ENSECAG00000000557	RPUSD4	89	49.857	Equus_caballus
ENSCVAG00000000392	rpusd4	78	56.906	ENSEEUG00000014036	RPUSD4	70	56.906	Erinaceus_europaeus
ENSCVAG00000000392	rpusd4	99	56.720	ENSELUG00000008075	rpusd4	97	56.720	Esox_lucius
ENSCVAG00000000392	rpusd4	93	51.360	ENSFCAG00000029789	RPUSD4	86	51.360	Felis_catus
ENSCVAG00000000392	rpusd4	93	51.534	ENSFALG00000005171	RPUSD4	96	51.534	Ficedula_albicollis
ENSCVAG00000000392	rpusd4	95	50.296	ENSFDAG00000014307	RPUSD4	89	50.296	Fukomys_damarensis
ENSCVAG00000000392	rpusd4	99	83.815	ENSFHEG00000004329	rpusd4	100	80.720	Fundulus_heteroclitus
ENSCVAG00000000392	rpusd4	92	63.889	ENSGMOG00000017726	rpusd4	99	62.874	Gadus_morhua
ENSCVAG00000000392	rpusd4	80	56.842	ENSGALG00000024326	RPUSD4	95	51.014	Gallus_gallus
ENSCVAG00000000392	rpusd4	98	79.429	ENSGAFG00000021559	rpusd4	100	77.099	Gambusia_affinis
ENSCVAG00000000392	rpusd4	96	72.107	ENSGACG00000001657	rpusd4	100	72.700	Gasterosteus_aculeatus
ENSCVAG00000000392	rpusd4	92	55.046	ENSGAGG00000000132	RPUSD4	89	55.046	Gopherus_agassizii
ENSCVAG00000000392	rpusd4	92	51.376	ENSGGOG00000016494	RPUSD4	87	50.904	Gorilla_gorilla
ENSCVAG00000000392	rpusd4	98	74.419	ENSHBUG00000022838	rpusd4	96	71.164	Haplochromis_burtoni
ENSCVAG00000000392	rpusd4	95	50.296	ENSHGLG00000002285	RPUSD4	88	50.296	Heterocephalus_glaber_female
ENSCVAG00000000392	rpusd4	95	50.296	ENSHGLG00100006385	RPUSD4	88	50.296	Heterocephalus_glaber_male
ENSCVAG00000000392	rpusd4	98	70.262	ENSHCOG00000006612	rpusd4	88	70.262	Hippocampus_comes
ENSCVAG00000000392	rpusd4	99	57.759	ENSIPUG00000023879	rusd4	90	57.759	Ictalurus_punctatus
ENSCVAG00000000392	rpusd4	94	52.711	ENSSTOG00000025280	RPUSD4	90	52.711	Ictidomys_tridecemlineatus
ENSCVAG00000000392	rpusd4	93	50.301	ENSJJAG00000018673	Rpusd4	89	50.301	Jaculus_jaculus
ENSCVAG00000000392	rpusd4	98	73.487	ENSKMAG00000021805	rpusd4	91	73.487	Kryptolebias_marmoratus
ENSCVAG00000000392	rpusd4	95	72.372	ENSLBEG00000020394	rpusd4	94	72.239	Labrus_bergylta
ENSCVAG00000000392	rpusd4	92	55.183	ENSLACG00000011028	RPUSD4	82	55.183	Latimeria_chalumnae
ENSCVAG00000000392	rpusd4	95	47.181	ENSLOCG00000003124	rpusd4	89	47.181	Lepisosteus_oculatus
ENSCVAG00000000392	rpusd4	94	51.506	ENSLAFG00000005211	RPUSD4	100	44.407	Loxodonta_africana
ENSCVAG00000000392	rpusd4	99	47.863	ENSMFAG00000039513	RPUSD4	89	47.863	Macaca_fascicularis
ENSCVAG00000000392	rpusd4	99	47.578	ENSMMUG00000007933	RPUSD4	89	47.578	Macaca_mulatta
ENSCVAG00000000392	rpusd4	99	48.148	ENSMNEG00000027414	RPUSD4	89	48.148	Macaca_nemestrina
ENSCVAG00000000392	rpusd4	92	50.613	ENSMLEG00000042461	RPUSD4	88	49.555	Mandrillus_leucophaeus
ENSCVAG00000000392	rpusd4	100	71.186	ENSMAMG00000023839	rpusd4	95	69.648	Mastacembelus_armatus
ENSCVAG00000000392	rpusd4	98	74.419	ENSMZEG00005011999	rpusd4	96	71.164	Maylandia_zebra
ENSCVAG00000000392	rpusd4	80	54.064	ENSMGAG00000000840	RPUSD4	99	51.064	Meleagris_gallopavo
ENSCVAG00000000392	rpusd4	94	51.506	ENSMAUG00000010280	Rpusd4	88	50.888	Mesocricetus_auratus
ENSCVAG00000000392	rpusd4	95	50.445	ENSMICG00000015979	RPUSD4	97	51.227	Microcebus_murinus
ENSCVAG00000000392	rpusd4	93	50.453	ENSMOCG00000000661	Rpusd4	86	50.453	Microtus_ochrogaster
ENSCVAG00000000392	rpusd4	89	73.312	ENSMMOG00000021731	rpusd4	93	73.312	Mola_mola
ENSCVAG00000000392	rpusd4	90	53.774	ENSMODG00000004521	RPUSD4	80	53.774	Monodelphis_domestica
ENSCVAG00000000392	rpusd4	88	72.727	ENSMALG00000005839	rpusd4	97	71.069	Monopterus_albus
ENSCVAG00000000392	rpusd4	95	50.000	MGP_CAROLIEiJ_G0031954	Rpusd4	88	50.000	Mus_caroli
ENSCVAG00000000392	rpusd4	95	50.592	ENSMUSG00000032044	Rpusd4	88	50.592	Mus_musculus
ENSCVAG00000000392	rpusd4	95	50.000	MGP_PahariEiJ_G0014819	Rpusd4	88	50.000	Mus_pahari
ENSCVAG00000000392	rpusd4	95	50.296	MGP_SPRETEiJ_G0033078	Rpusd4	88	50.296	Mus_spretus
ENSCVAG00000000392	rpusd4	98	50.000	ENSMPUG00000006608	RPUSD4	89	50.000	Mustela_putorius_furo
ENSCVAG00000000392	rpusd4	72	52.344	ENSMLUG00000029348	-	99	52.344	Myotis_lucifugus
ENSCVAG00000000392	rpusd4	99	50.568	ENSMLUG00000017328	-	89	50.568	Myotis_lucifugus
ENSCVAG00000000392	rpusd4	95	51.775	ENSNGAG00000020847	Rpusd4	90	51.744	Nannospalax_galili
ENSCVAG00000000392	rpusd4	98	73.256	ENSNBRG00000005207	rpusd4	99	73.256	Neolamprologus_brichardi
ENSCVAG00000000392	rpusd4	99	49.003	ENSNLEG00000007465	RPUSD4	89	49.003	Nomascus_leucogenys
ENSCVAG00000000392	rpusd4	99	51.576	ENSMEUG00000004370	RPUSD4	90	51.576	Notamacropus_eugenii
ENSCVAG00000000392	rpusd4	95	50.445	ENSODEG00000004577	RPUSD4	88	50.445	Octodon_degus
ENSCVAG00000000392	rpusd4	98	75.581	ENSONIG00000018879	rpusd4	94	74.063	Oreochromis_niloticus
ENSCVAG00000000392	rpusd4	83	50.836	ENSOANG00000007247	RPUSD4	95	50.662	Ornithorhynchus_anatinus
ENSCVAG00000000392	rpusd4	95	51.765	ENSOCUG00000017039	RPUSD4	89	51.765	Oryctolagus_cuniculus
ENSCVAG00000000392	rpusd4	96	69.527	ENSORLG00000002750	rpusd4	91	70.427	Oryzias_latipes
ENSCVAG00000000392	rpusd4	98	69.364	ENSORLG00020002044	rpusd4	90	67.945	Oryzias_latipes_hni
ENSCVAG00000000392	rpusd4	98	68.786	ENSORLG00015020034	rpusd4	86	68.786	Oryzias_latipes_hsok
ENSCVAG00000000392	rpusd4	98	72.543	ENSOMEG00000004861	rpusd4	85	72.543	Oryzias_melastigma
ENSCVAG00000000392	rpusd4	92	52.761	ENSOGAG00000008922	RPUSD4	86	52.568	Otolemur_garnettii
ENSCVAG00000000392	rpusd4	92	50.613	ENSOARG00000012238	RPUSD4	87	49.565	Ovis_aries
ENSCVAG00000000392	rpusd4	92	51.376	ENSPPAG00000042883	RPUSD4	81	50.904	Pan_paniscus
ENSCVAG00000000392	rpusd4	93	51.360	ENSPPRG00000003081	RPUSD4	86	51.360	Panthera_pardus
ENSCVAG00000000392	rpusd4	93	51.360	ENSPTIG00000012059	RPUSD4	88	52.077	Panthera_tigris_altaica
ENSCVAG00000000392	rpusd4	92	51.376	ENSPTRG00000004454	RPUSD4	89	49.429	Pan_troglodytes
ENSCVAG00000000392	rpusd4	99	47.863	ENSPANG00000015040	RPUSD4	89	47.863	Papio_anubis
ENSCVAG00000000392	rpusd4	94	60.843	ENSPKIG00000023986	rpusd4	84	60.843	Paramormyrops_kingsleyae
ENSCVAG00000000392	rpusd4	85	55.446	ENSPSIG00000014268	RPUSD4	95	55.446	Pelodiscus_sinensis
ENSCVAG00000000392	rpusd4	99	64.756	ENSPMGG00000002806	rpusd4	97	64.756	Periophthalmus_magnuspinnatus
ENSCVAG00000000392	rpusd4	95	45.562	ENSPEMG00000000278	Rpusd4	87	45.562	Peromyscus_maniculatus_bairdii
ENSCVAG00000000392	rpusd4	89	40.351	ENSPMAG00000008183	rpusd4	99	40.351	Petromyzon_marinus
ENSCVAG00000000392	rpusd4	94	53.453	ENSPCIG00000010212	RPUSD4	90	53.453	Phascolarctos_cinereus
ENSCVAG00000000392	rpusd4	96	80.233	ENSPFOG00000019030	rpusd4	100	78.534	Poecilia_formosa
ENSCVAG00000000392	rpusd4	100	78.117	ENSPLAG00000016848	rpusd4	100	78.117	Poecilia_latipinna
ENSCVAG00000000392	rpusd4	100	77.608	ENSPMEG00000017534	rpusd4	100	77.608	Poecilia_mexicana
ENSCVAG00000000392	rpusd4	93	80.000	ENSPREG00000005689	rpusd4	96	77.212	Poecilia_reticulata
ENSCVAG00000000392	rpusd4	99	48.857	ENSPPYG00000004043	RPUSD4	89	48.857	Pongo_abelii
ENSCVAG00000000392	rpusd4	72	56.180	ENSPCAG00000000753	RPUSD4	70	56.044	Procavia_capensis
ENSCVAG00000000392	rpusd4	95	47.917	ENSPCOG00000020694	RPUSD4	89	47.917	Propithecus_coquereli
ENSCVAG00000000392	rpusd4	95	50.888	ENSPVAG00000000988	RPUSD4	89	50.888	Pteropus_vampyrus
ENSCVAG00000000392	rpusd4	98	74.419	ENSPNYG00000009652	rpusd4	96	71.164	Pundamilia_nyererei
ENSCVAG00000000392	rpusd4	97	57.971	ENSPNAG00000012264	rpusd4	90	57.971	Pygocentrus_nattereri
ENSCVAG00000000392	rpusd4	95	51.183	ENSRNOG00000011567	Rpusd4	93	48.128	Rattus_norvegicus
ENSCVAG00000000392	rpusd4	97	48.116	ENSRBIG00000034842	RPUSD4	89	47.578	Rhinopithecus_bieti
ENSCVAG00000000392	rpusd4	97	48.116	ENSRROG00000039753	RPUSD4	89	47.578	Rhinopithecus_roxellana
ENSCVAG00000000392	rpusd4	95	49.112	ENSSBOG00000030413	RPUSD4	89	49.112	Saimiri_boliviensis_boliviensis
ENSCVAG00000000392	rpusd4	85	54.785	ENSSHAG00000008304	RPUSD4	99	54.785	Sarcophilus_harrisii
ENSCVAG00000000392	rpusd4	99	54.324	ENSSFOG00015006203	rpusd4	99	54.595	Scleropages_formosus
ENSCVAG00000000392	rpusd4	99	69.209	ENSSMAG00000020978	rpusd4	100	64.721	Scophthalmus_maximus
ENSCVAG00000000392	rpusd4	99	71.225	ENSSDUG00000013399	rpusd4	96	68.883	Seriola_dumerili
ENSCVAG00000000392	rpusd4	99	71.510	ENSSLDG00000023507	rpusd4	96	69.149	Seriola_lalandi_dorsalis
ENSCVAG00000000392	rpusd4	84	57.576	ENSSPUG00000001401	RPUSD4	90	54.878	Sphenodon_punctatus
ENSCVAG00000000392	rpusd4	98	72.464	ENSSPAG00000012163	rpusd4	100	67.342	Stegastes_partitus
ENSCVAG00000000392	rpusd4	95	49.555	ENSSSCG00000015233	RPUSD4	88	49.555	Sus_scrofa
ENSCVAG00000000392	rpusd4	85	54.333	ENSTGUG00000000773	RPUSD4	99	54.333	Taeniopygia_guttata
ENSCVAG00000000392	rpusd4	98	67.536	ENSTRUG00000012283	rpusd4	98	62.629	Takifugu_rubripes
ENSCVAG00000000392	rpusd4	97	69.027	ENSTNIG00000014676	rpusd4	98	63.896	Tetraodon_nigroviridis
ENSCVAG00000000392	rpusd4	95	50.445	ENSTTRG00000001555	RPUSD4	88	50.445	Tursiops_truncatus
ENSCVAG00000000392	rpusd4	98	50.289	ENSUMAG00000002219	RPUSD4	89	50.289	Ursus_maritimus
ENSCVAG00000000392	rpusd4	62	48.636	ENSVPAG00000001066	RPUSD4	87	48.305	Vicugna_pacos
ENSCVAG00000000392	rpusd4	98	51.156	ENSVVUG00000020101	RPUSD4	88	51.156	Vulpes_vulpes
ENSCVAG00000000392	rpusd4	98	80.857	ENSXCOG00000004676	rpusd4	100	78.117	Xiphophorus_couchianus
ENSCVAG00000000392	rpusd4	98	80.857	ENSXMAG00000023351	rpusd4	100	78.117	Xiphophorus_maculatus