EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000000397 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
6609 bases
Position
chrKL652507.1:2234819-2241427
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000013124LSMPF01423.221.8e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000030603-381-ENSCVAP00000013124126 (aa)--
Gene Model
Click here to download ENSCVAG00000000397's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000397's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000000397snrpf5250.000ENSCVAG00000001592lsm68350.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000000397snrpf6797.647ENSG00000139343SNRPF9997.647Homo_sapiens
ENSCVAG00000000397snrpf8873.874ENSAPOG00000003377snrpf8573.874Acanthochromis_polyacanthus
ENSCVAG00000000397snrpf6797.647ENSAMEG00000002166-10097.647Ailuropoda_melanoleuca
ENSCVAG00000000397snrpf6084.000ENSAMEG00000018718-8685.135Ailuropoda_melanoleuca
ENSCVAG00000000397snrpf67100.000ENSACIG00000013216snrpf99100.000Amphilophus_citrinellus
ENSCVAG00000000397snrpf67100.000ENSAOCG00000015108snrpf99100.000Amphiprion_ocellaris
ENSCVAG00000000397snrpf67100.000ENSAPEG00000022022snrpf99100.000Amphiprion_percula
ENSCVAG00000000397snrpf6897.674ENSATEG00000022625snrpf9297.674Anabas_testudineus
ENSCVAG00000000397snrpf6094.737ENSACAG00000014073SNRPF8794.737Anolis_carolinensis
ENSCVAG00000000397snrpf5967.568ENSANAG00000025860-8367.568Aotus_nancymaae
ENSCVAG00000000397snrpf6383.750ENSANAG00000020297-7383.750Aotus_nancymaae
ENSCVAG00000000397snrpf6797.647ENSANAG00000032845SNRPF9997.647Aotus_nancymaae
ENSCVAG00000000397snrpf67100.000ENSACLG00000016066snrpf99100.000Astatotilapia_calliptera
ENSCVAG00000000397snrpf5997.297ENSAMXG00000007421snrpf8697.297Astyanax_mexicanus
ENSCVAG00000000397snrpf6190.909ENSBTAG00000050012-9190.541Bos_taurus
ENSCVAG00000000397snrpf6797.647ENSBTAG00000016271SNRPF9997.647Bos_taurus
ENSCVAG00000000397snrpf6171.429WBGene00004918snr-58573.611Caenorhabditis_elegans
ENSCVAG00000000397snrpf6797.647ENSCJAG00000002705-9997.647Callithrix_jacchus
ENSCVAG00000000397snrpf6797.647ENSCAFG00000006395-7797.647Canis_familiaris
ENSCVAG00000000397snrpf5691.549ENSCAFG00000031151-8591.781Canis_familiaris
ENSCVAG00000000397snrpf5691.549ENSCAFG00020010823-8591.781Canis_lupus_dingo
ENSCVAG00000000397snrpf6285.897ENSCAFG00020013161-7494.286Canis_lupus_dingo
ENSCVAG00000000397snrpf5983.784ENSTSYG00000030635-8683.784Carlito_syrichta
ENSCVAG00000000397snrpf5992.000ENSTSYG00000036502-8692.000Carlito_syrichta
ENSCVAG00000000397snrpf6392.500ENSTSYG00000031636-6193.151Carlito_syrichta
ENSCVAG00000000397snrpf6797.647ENSCAPG00000007242SNRPF10097.647Cavia_aperea
ENSCVAG00000000397snrpf6797.647ENSCPOG00000013898SNRPF9997.647Cavia_porcellus
ENSCVAG00000000397snrpf6797.647ENSCCAG00000037378-9997.647Cebus_capucinus
ENSCVAG00000000397snrpf6788.095ENSCCAG00000033627-5789.041Cebus_capucinus
ENSCVAG00000000397snrpf6796.471ENSCCAG00000017356-9996.471Cebus_capucinus
ENSCVAG00000000397snrpf6797.647ENSCLAG00000007200SNRPF9997.647Chinchilla_lanigera
ENSCVAG00000000397snrpf7381.522ENSCSAG00000003602-7482.418Chlorocebus_sabaeus
ENSCVAG00000000397snrpf5096.825ENSCHOG00000009392SNRPF9896.825Choloepus_hoffmanni
ENSCVAG00000000397snrpf5989.189ENSCPBG00000006227-8689.189Chrysemys_picta_bellii
ENSCVAG00000000397snrpf6785.882ENSCPBG00000001985-8887.838Chrysemys_picta_bellii
ENSCVAG00000000397snrpf6787.059ENSCPBG00000026463-8687.838Chrysemys_picta_bellii
ENSCVAG00000000397snrpf7190.000ENSCPBG00000024287-6491.139Chrysemys_picta_bellii
ENSCVAG00000000397snrpf7084.091ENSCSAVG00000007498-8885.714Ciona_savignyi
ENSCVAG00000000397snrpf6797.647ENSCGRG00001017100-9997.647Cricetulus_griseus_chok1gshd
ENSCVAG00000000397snrpf5890.411ENSCGRG00001008965-5790.411Cricetulus_griseus_chok1gshd
ENSCVAG00000000397snrpf6291.026ENSCGRG00000018878-9190.411Cricetulus_griseus_crigri
ENSCVAG00000000397snrpf6797.647ENSCGRG00000000336-9997.647Cricetulus_griseus_crigri
ENSCVAG00000000397snrpf6898.837ENSCSEG00000004748snrpf9998.824Cynoglossus_semilaevis
ENSCVAG00000000397snrpf6797.701ENSDARG00000105037snrpf9997.701Danio_rerio
ENSCVAG00000000397snrpf6093.421ENSDNOG00000048989-6695.946Dasypus_novemcinctus
ENSCVAG00000000397snrpf9772.951ENSDNOG00000043775-7672.951Dasypus_novemcinctus
ENSCVAG00000000397snrpf5981.081ENSDNOG00000049373-8068.478Dasypus_novemcinctus
ENSCVAG00000000397snrpf5687.324ENSDORG00000025351-9987.324Dipodomys_ordii
ENSCVAG00000000397snrpf6776.471FBgn0000426SmF8479.730Drosophila_melanogaster
ENSCVAG00000000397snrpf6797.647ENSETEG00000001558-9997.647Echinops_telfairi
ENSCVAG00000000397snrpf6575.610ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSCVAG00000000397snrpf7084.091ENSECAG00000019817SNRPF7284.091Equus_caballus
ENSCVAG00000000397snrpf6797.647ENSEEUG00000013509SNRPF10097.647Erinaceus_europaeus
ENSCVAG00000000397snrpf7983.838ENSELUG00000007737RUXF8595.946Esox_lucius
ENSCVAG00000000397snrpf6797.647ENSELUG00000003121RUXF9997.647Esox_lucius
ENSCVAG00000000397snrpf6797.647ENSFCAG00000029966-9997.647Felis_catus
ENSCVAG00000000397snrpf7965.000ENSFCAG00000031148-8662.766Felis_catus
ENSCVAG00000000397snrpf5972.973ENSFCAG00000021942-8572.973Felis_catus
ENSCVAG00000000397snrpf6897.674ENSFALG00000010799SNRPF10097.674Ficedula_albicollis
ENSCVAG00000000397snrpf6797.647ENSFDAG00000002831-9997.647Fukomys_damarensis
ENSCVAG00000000397snrpf6989.655ENSFHEG00000003240snrpf7589.655Fundulus_heteroclitus
ENSCVAG00000000397snrpf67100.000ENSGMOG00000007741snrpf100100.000Gadus_morhua
ENSCVAG00000000397snrpf6797.647ENSGALG00000011409SNRPF9997.647Gallus_gallus
ENSCVAG00000000397snrpf67100.000ENSGAFG00000016187snrpf97100.000Gambusia_affinis
ENSCVAG00000000397snrpf6798.824ENSGACG00000020055snrpf10098.824Gasterosteus_aculeatus
ENSCVAG00000000397snrpf5483.824ENSGAGG00000014132-8283.824Gopherus_agassizii
ENSCVAG00000000397snrpf7084.091ENSGAGG00000022991-8685.714Gopherus_agassizii
ENSCVAG00000000397snrpf5990.541ENSGAGG00000012945-6891.892Gopherus_agassizii
ENSCVAG00000000397snrpf6678.313ENSGGOG00000039936-8275.676Gorilla_gorilla
ENSCVAG00000000397snrpf6797.647ENSGGOG00000001127-9997.647Gorilla_gorilla
ENSCVAG00000000397snrpf6274.359ENSGGOG00000039564-8972.973Gorilla_gorilla
ENSCVAG00000000397snrpf6797.647ENSHGLG00000009108SNRPF9997.647Heterocephalus_glaber_female
ENSCVAG00000000397snrpf6796.471ENSHGLG00000021172-9996.471Heterocephalus_glaber_female
ENSCVAG00000000397snrpf6797.647ENSHGLG00100008103-10097.647Heterocephalus_glaber_male
ENSCVAG00000000397snrpf6796.471ENSHGLG00100019596-9996.471Heterocephalus_glaber_male
ENSCVAG00000000397snrpf5088.571ENSHCOG00000018663snrpf5588.571Hippocampus_comes
ENSCVAG00000000397snrpf67100.000ENSIPUG00000018994snrpf99100.000Ictalurus_punctatus
ENSCVAG00000000397snrpf6797.647ENSSTOG00000010434-9997.647Ictidomys_tridecemlineatus
ENSCVAG00000000397snrpf6778.824ENSJJAG00000004558-8879.730Jaculus_jaculus
ENSCVAG00000000397snrpf5391.045ENSJJAG00000004828-8692.857Jaculus_jaculus
ENSCVAG00000000397snrpf6797.647ENSJJAG00000011272-9997.647Jaculus_jaculus
ENSCVAG00000000397snrpf6782.353ENSJJAG00000010502-8883.784Jaculus_jaculus
ENSCVAG00000000397snrpf67100.000ENSKMAG00000013566snrpf98100.000Kryptolebias_marmoratus
ENSCVAG00000000397snrpf6798.824ENSLBEG00000008800snrpf9998.824Labrus_bergylta
ENSCVAG00000000397snrpf6887.209ENSLACG00000002456-7187.209Latimeria_chalumnae
ENSCVAG00000000397snrpf6797.647ENSLOCG00000015744snrpf9997.647Lepisosteus_oculatus
ENSCVAG00000000397snrpf6897.674ENSLAFG00000017426SNRPF10097.674Loxodonta_africana
ENSCVAG00000000397snrpf6798.810ENSMAMG00000016593snrpf9998.810Mastacembelus_armatus
ENSCVAG00000000397snrpf67100.000ENSMZEG00005014701snrpf99100.000Maylandia_zebra
ENSCVAG00000000397snrpf6796.471ENSMGAG00000011453-7796.471Meleagris_gallopavo
ENSCVAG00000000397snrpf6672.289ENSMAUG00000010289-8672.222Mesocricetus_auratus
ENSCVAG00000000397snrpf5997.297ENSMAUG00000016909-10097.297Mesocricetus_auratus
ENSCVAG00000000397snrpf5997.297ENSMAUG00000019737-10097.297Mesocricetus_auratus
ENSCVAG00000000397snrpf5993.243ENSMAUG00000008799-8693.243Mesocricetus_auratus
ENSCVAG00000000397snrpf5990.541ENSMICG00000030494-5990.541Microcebus_murinus
ENSCVAG00000000397snrpf6797.647ENSMICG00000012153-9997.647Microcebus_murinus
ENSCVAG00000000397snrpf6797.647ENSMOCG00000020437Snrpf9997.647Microtus_ochrogaster
ENSCVAG00000000397snrpf5480.882ENSMOCG00000020220-8780.882Microtus_ochrogaster
ENSCVAG00000000397snrpf5983.784ENSMOCG00000022166-8183.784Microtus_ochrogaster
ENSCVAG00000000397snrpf6798.824ENSMMOG00000007127snrpf10098.824Mola_mola
ENSCVAG00000000397snrpf6797.647ENSMODG00000008091SNRPF7597.647Monodelphis_domestica
ENSCVAG00000000397snrpf67100.000ENSMALG00000012328snrpf99100.000Monopterus_albus
ENSCVAG00000000397snrpf6797.647MGP_CAROLIEiJ_G0015735-9997.647Mus_caroli
ENSCVAG00000000397snrpf6797.647ENSMUSG00000020018Snrpf9997.647Mus_musculus
ENSCVAG00000000397snrpf6797.647MGP_PahariEiJ_G0031350Snrpf9997.647Mus_pahari
ENSCVAG00000000397snrpf6797.647MGP_SPRETEiJ_G0016553Snrpf9997.647Mus_spretus
ENSCVAG00000000397snrpf7085.227ENSMPUG00000007176-7985.227Mustela_putorius_furo
ENSCVAG00000000397snrpf7084.091ENSMLUG00000027932-8384.091Myotis_lucifugus
ENSCVAG00000000397snrpf6797.647ENSMLUG00000013577-10097.647Myotis_lucifugus
ENSCVAG00000000397snrpf7084.091ENSMLUG00000026149-8384.091Myotis_lucifugus
ENSCVAG00000000397snrpf6778.824ENSMLUG00000026269-7077.027Myotis_lucifugus
ENSCVAG00000000397snrpf7084.091ENSMLUG00000029201-8384.091Myotis_lucifugus
ENSCVAG00000000397snrpf5090.476ENSNGAG00000005851-7190.000Nannospalax_galili
ENSCVAG00000000397snrpf6797.647ENSNGAG00000024292-9997.647Nannospalax_galili
ENSCVAG00000000397snrpf7098.864ENSNBRG00000011682snrpf9098.864Neolamprologus_brichardi
ENSCVAG00000000397snrpf5970.270ENSMEUG00000000671SNRPF8770.270Notamacropus_eugenii
ENSCVAG00000000397snrpf6797.647ENSODEG00000010328-9997.647Octodon_degus
ENSCVAG00000000397snrpf6797.647ENSOCUG00000010925SNRPF7597.647Oryctolagus_cuniculus
ENSCVAG00000000397snrpf5997.297ENSORLG00020008216snrpf8797.297Oryzias_latipes_hni
ENSCVAG00000000397snrpf5997.297ENSORLG00015007418snrpf8797.297Oryzias_latipes_hsok
ENSCVAG00000000397snrpf6798.810ENSOMEG00000003018snrpf9998.810Oryzias_melastigma
ENSCVAG00000000397snrpf5995.946ENSOGAG00000030323-8695.946Otolemur_garnettii
ENSCVAG00000000397snrpf6797.647ENSOARG00000011853-7497.647Ovis_aries
ENSCVAG00000000397snrpf6274.359ENSPPAG00000037479-8972.973Pan_paniscus
ENSCVAG00000000397snrpf6678.313ENSPPAG00000037544-8275.676Pan_paniscus
ENSCVAG00000000397snrpf6797.647ENSPPRG00000005875-9997.647Panthera_pardus
ENSCVAG00000000397snrpf6674.699ENSPPRG00000007449-7674.324Panthera_pardus
ENSCVAG00000000397snrpf6677.108ENSPTIG00000005117-8874.324Panthera_tigris_altaica
ENSCVAG00000000397snrpf6797.647ENSPTIG00000007520SNRPF9997.647Panthera_tigris_altaica
ENSCVAG00000000397snrpf6678.313ENSPTRG00000043814-8275.676Pan_troglodytes
ENSCVAG00000000397snrpf6274.359ENSPTRG00000047717-8972.973Pan_troglodytes
ENSCVAG00000000397snrpf7097.727ENSPKIG00000014784snrpf9797.727Paramormyrops_kingsleyae
ENSCVAG00000000397snrpf6897.674ENSPSIG00000016462SNRPF10097.674Pelodiscus_sinensis
ENSCVAG00000000397snrpf6798.824ENSPMGG00000023548snrpf10098.824Periophthalmus_magnuspinnatus
ENSCVAG00000000397snrpf6797.647ENSPEMG00000023326Snrpf9997.647Peromyscus_maniculatus_bairdii
ENSCVAG00000000397snrpf67100.000ENSPLAG00000023932snrpf99100.000Poecilia_latipinna
ENSCVAG00000000397snrpf67100.000ENSPMEG00000003377snrpf99100.000Poecilia_mexicana
ENSCVAG00000000397snrpf67100.000ENSPREG00000022635snrpf97100.000Poecilia_reticulata
ENSCVAG00000000397snrpf6797.647ENSPPYG00000004847-9997.647Pongo_abelii
ENSCVAG00000000397snrpf6797.647ENSPCOG00000023833-9997.647Propithecus_coquereli
ENSCVAG00000000397snrpf6797.647ENSPVAG00000009036SNRPF9997.647Pteropus_vampyrus
ENSCVAG00000000397snrpf67100.000ENSPNYG00000021712snrpf99100.000Pundamilia_nyererei
ENSCVAG00000000397snrpf6798.810ENSPNAG00000019117snrpf9998.810Pygocentrus_nattereri
ENSCVAG00000000397snrpf6797.647ENSRNOG00000005556Snrpf9997.647Rattus_norvegicus
ENSCVAG00000000397snrpf5994.595ENSRBIG00000030414-8694.595Rhinopithecus_bieti
ENSCVAG00000000397snrpf5994.595ENSRROG00000021975-8694.595Rhinopithecus_roxellana
ENSCVAG00000000397snrpf5660.563YPR182WSMX38360.563Saccharomyces_cerevisiae
ENSCVAG00000000397snrpf6796.471ENSSBOG00000012868-9996.471Saimiri_boliviensis_boliviensis
ENSCVAG00000000397snrpf6797.647ENSSBOG00000036179-9997.647Saimiri_boliviensis_boliviensis
ENSCVAG00000000397snrpf6177.500ENSSBOG00000027638-9077.500Saimiri_boliviensis_boliviensis
ENSCVAG00000000397snrpf5982.432ENSSBOG00000032297-8582.432Saimiri_boliviensis_boliviensis
ENSCVAG00000000397snrpf6797.647ENSSHAG00000012294SNRPF7797.647Sarcophilus_harrisii
ENSCVAG00000000397snrpf5298.462ENSSFOG00015021523snrpf9798.462Scleropages_formosus
ENSCVAG00000000397snrpf6798.824ENSSMAG00000005533snrpf9898.824Scophthalmus_maximus
ENSCVAG00000000397snrpf51100.000ENSSDUG00000016283snrpf76100.000Seriola_dumerili
ENSCVAG00000000397snrpf6569.512ENSSLDG00000003885-9372.368Seriola_lalandi_dorsalis
ENSCVAG00000000397snrpf6798.824ENSSLDG00000005119snrpf9998.824Seriola_lalandi_dorsalis
ENSCVAG00000000397snrpf6797.619ENSSPUG00000014590-9997.619Sphenodon_punctatus
ENSCVAG00000000397snrpf6898.837ENSSPAG00000003283snrpf9898.837Stegastes_partitus
ENSCVAG00000000397snrpf6797.647ENSSSCG00000000895SNRPF9997.647Sus_scrofa
ENSCVAG00000000397snrpf5598.551ENSTRUG00000014956snrpf10098.551Takifugu_rubripes
ENSCVAG00000000397snrpf6798.824ENSTNIG00000012672snrpf9998.824Tetraodon_nigroviridis
ENSCVAG00000000397snrpf5970.270ENSTTRG00000006070SNRPF8670.270Tursiops_truncatus
ENSCVAG00000000397snrpf6784.706ENSUAMG00000001101-8786.486Ursus_americanus
ENSCVAG00000000397snrpf6797.647ENSUAMG00000008176-9997.647Ursus_americanus
ENSCVAG00000000397snrpf5986.486ENSUMAG00000006177-8786.486Ursus_maritimus
ENSCVAG00000000397snrpf6797.647ENSUMAG00000003528-9997.647Ursus_maritimus
ENSCVAG00000000397snrpf6797.647ENSVPAG00000008712-9997.647Vicugna_pacos
ENSCVAG00000000397snrpf6189.610ENSVVUG00000023821-9589.189Vulpes_vulpes
ENSCVAG00000000397snrpf5975.000ENSXETG00000021630snrpf8772.368Xenopus_tropicalis
ENSCVAG00000000397snrpf67100.000ENSXCOG00000013860snrpf97100.000Xiphophorus_couchianus
ENSCVAG00000000397snrpf67100.000ENSXMAG00000015448snrpf99100.000Xiphophorus_maculatus

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