EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000000484 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2786 bases
Position: chrKL653945.1:146205-148990
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015626	RVT_1	PF00078.27	5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031604	-	783	-	ENSCVAP00000015626	260 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000000484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000000484	-	93	37.956	ENSCVAG00000009961	-	54	37.956

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000484	-	61	34.031	ENSACIG00000023684	-	86	34.031	Amphilophus_citrinellus
ENSCVAG00000000484	-	78	56.682	ENSACIG00000022447	-	85	56.682	Amphilophus_citrinellus
ENSCVAG00000000484	-	64	39.196	ENSAOCG00000018248	-	78	39.196	Amphiprion_ocellaris
ENSCVAG00000000484	-	89	40.637	ENSAOCG00000004500	-	70	40.637	Amphiprion_ocellaris
ENSCVAG00000000484	-	67	35.681	ENSACAG00000010816	-	60	35.681	Anolis_carolinensis
ENSCVAG00000000484	-	94	37.319	ENSACLG00000010837	-	67	37.319	Astatotilapia_calliptera
ENSCVAG00000000484	-	62	50.000	ENSACLG00000012369	-	65	50.000	Astatotilapia_calliptera
ENSCVAG00000000484	-	82	36.885	ENSAMXG00000040763	-	62	36.885	Astyanax_mexicanus
ENSCVAG00000000484	-	62	36.872	ENSHBUG00000023598	-	71	36.872	Haplochromis_burtoni
ENSCVAG00000000484	-	88	30.189	ENSIPUG00000010242	-	69	30.189	Ictalurus_punctatus
ENSCVAG00000000484	-	80	30.000	ENSIPUG00000012946	-	81	30.000	Ictalurus_punctatus
ENSCVAG00000000484	-	96	34.164	ENSLACG00000022331	-	85	34.164	Latimeria_chalumnae
ENSCVAG00000000484	-	97	33.569	ENSLACG00000022376	-	60	33.569	Latimeria_chalumnae
ENSCVAG00000000484	-	94	37.681	ENSMZEG00005006211	-	67	37.681	Maylandia_zebra
ENSCVAG00000000484	-	83	37.903	ENSMMOG00000003125	-	82	37.903	Mola_mola
ENSCVAG00000000484	-	80	37.657	ENSMMOG00000007110	-	86	37.657	Mola_mola
ENSCVAG00000000484	-	89	38.077	ENSORLG00000028706	-	53	38.077	Oryzias_latipes
ENSCVAG00000000484	-	94	38.235	ENSORLG00000030126	-	63	38.235	Oryzias_latipes
ENSCVAG00000000484	-	89	36.431	ENSORLG00000028976	-	69	37.121	Oryzias_latipes
ENSCVAG00000000484	-	70	40.000	ENSORLG00020007779	-	56	40.000	Oryzias_latipes_hni
ENSCVAG00000000484	-	70	40.000	ENSORLG00020018629	-	56	40.000	Oryzias_latipes_hni
ENSCVAG00000000484	-	89	38.491	ENSORLG00020016429	-	51	38.491	Oryzias_latipes_hni
ENSCVAG00000000484	-	82	37.190	ENSORLG00015007703	-	62	37.190	Oryzias_latipes_hsok
ENSCVAG00000000484	-	83	37.247	ENSORLG00015021206	-	51	37.247	Oryzias_latipes_hsok
ENSCVAG00000000484	-	94	37.500	ENSORLG00015007976	-	73	37.500	Oryzias_latipes_hsok
ENSCVAG00000000484	-	73	33.831	ENSOMEG00000022778	-	54	33.831	Oryzias_melastigma
ENSCVAG00000000484	-	94	35.897	ENSOMEG00000022009	-	59	35.897	Oryzias_melastigma
ENSCVAG00000000484	-	85	33.333	ENSOMEG00000008379	-	78	34.921	Oryzias_melastigma
ENSCVAG00000000484	-	96	74.021	ENSPMEG00000003715	-	95	74.021	Poecilia_mexicana
ENSCVAG00000000484	-	97	40.210	ENSPREG00000006501	-	52	40.210	Poecilia_reticulata
ENSCVAG00000000484	-	78	39.407	ENSPNYG00000012547	-	77	39.407	Pundamilia_nyererei
ENSCVAG00000000484	-	53	30.233	ENSPNYG00000006014	-	68	30.233	Pundamilia_nyererei
ENSCVAG00000000484	-	56	37.143	ENSPNYG00000000591	-	81	37.143	Pundamilia_nyererei
ENSCVAG00000000484	-	61	36.170	ENSPNYG00000022953	-	82	36.170	Pundamilia_nyererei
ENSCVAG00000000484	-	89	35.227	ENSPNAG00000014375	-	64	35.227	Pygocentrus_nattereri
ENSCVAG00000000484	-	73	36.058	ENSSLDG00000008400	-	92	36.058	Seriola_lalandi_dorsalis
ENSCVAG00000000484	-	77	31.915	ENSXETG00000031743	-	94	31.915	Xenopus_tropicalis