EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000504 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 12731 bases
Position: chrKL653123.1:371378-384108
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016454	PWI	PF01480.17	2.2e-31	1	1
ENSCVAP00000030680	PWI	PF01480.17	8.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000024837	-	714	-	ENSCVAP00000016454	237 (aa)	-	-
ENSCVAT00000024814	-	351	-	ENSCVAP00000030680	116 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000000504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000504	-	67	93.590	ENSG00000133226	SRRM1	99	93.590	Homo_sapiens
ENSCVAG00000000504	-	100	86.134	ENSACIG00000023398	-	98	86.555	Amphilophus_citrinellus
ENSCVAG00000000504	-	100	75.949	ENSACLG00000019786	-	96	82.353	Astatotilapia_calliptera
ENSCVAG00000000504	-	99	79.487	ENSAMXG00000040320	-	99	80.769	Astyanax_mexicanus
ENSCVAG00000000504	-	77	83.146	ENSCHIG00000021159	-	55	92.208	Capra_hircus
ENSCVAG00000000504	-	67	69.231	ENSCING00000022242	-	100	62.874	Ciona_intestinalis
ENSCVAG00000000504	-	75	70.115	ENSCSAVG00000003919	-	94	60.000	Ciona_savignyi
ENSCVAG00000000504	-	72	89.286	ENSDORG00000028601	-	91	79.885	Dipodomys_ordii
ENSCVAG00000000504	-	67	76.923	ENSFCAG00000044640	-	73	76.250	Felis_catus
ENSCVAG00000000504	-	100	68.619	ENSFCAG00000034671	-	84	66.667	Felis_catus
ENSCVAG00000000504	-	61	92.958	ENSFALG00000000476	SRRM1	100	92.958	Ficedula_albicollis
ENSCVAG00000000504	-	99	81.590	ENSFHEG00000007359	-	96	86.170	Fundulus_heteroclitus
ENSCVAG00000000504	-	67	93.590	ENSGALG00000001283	SRRM1	99	93.590	Gallus_gallus
ENSCVAG00000000504	-	100	95.781	ENSGAFG00000019431	-	98	95.781	Gambusia_affinis
ENSCVAG00000000504	-	68	97.468	ENSHBUG00000020354	-	99	98.718	Haplochromis_burtoni
ENSCVAG00000000504	-	72	76.190	ENSHGLG00100017918	-	100	77.612	Heterocephalus_glaber_male
ENSCVAG00000000504	-	64	78.378	ENSHGLG00100010430	-	99	73.750	Heterocephalus_glaber_male
ENSCVAG00000000504	-	84	83.505	ENSKMAG00000013810	-	97	86.957	Kryptolebias_marmoratus
ENSCVAG00000000504	-	100	76.371	ENSMZEG00005006344	-	96	82.773	Maylandia_zebra
ENSCVAG00000000504	-	98	83.190	ENSMMOG00000002390	-	94	83.190	Mola_mola
ENSCVAG00000000504	-	100	77.593	ENSMALG00000010813	-	98	76.349	Monopterus_albus
ENSCVAG00000000504	-	72	89.286	MGP_CAROLIEiJ_G0026636	Srrm1	92	76.684	Mus_caroli
ENSCVAG00000000504	-	72	89.286	ENSMUSG00000028809	Srrm1	92	76.684	Mus_musculus
ENSCVAG00000000504	-	72	89.286	MGP_PahariEiJ_G0028969	Srrm1	92	76.684	Mus_pahari
ENSCVAG00000000504	-	72	89.286	MGP_SPRETEiJ_G0027616	Srrm1	92	76.684	Mus_spretus
ENSCVAG00000000504	-	99	69.915	ENSMPUG00000015831	-	99	67.521	Mustela_putorius_furo
ENSCVAG00000000504	-	100	85.294	ENSNBRG00000010911	-	95	86.809	Neolamprologus_brichardi
ENSCVAG00000000504	-	67	84.615	ENSODEG00000002361	-	100	84.615	Octodon_degus
ENSCVAG00000000504	-	65	86.667	ENSODEG00000007221	-	97	86.667	Octodon_degus
ENSCVAG00000000504	-	67	89.744	ENSODEG00000019473	-	100	89.744	Octodon_degus
ENSCVAG00000000504	-	100	85.232	ENSORLG00000017510	-	98	86.076	Oryzias_latipes
ENSCVAG00000000504	-	68	97.468	ENSORLG00020018419	-	99	98.718	Oryzias_latipes_hni
ENSCVAG00000000504	-	75	70.000	ENSPTIG00000022093	-	91	67.337	Panthera_tigris_altaica
ENSCVAG00000000504	-	98	77.586	ENSPMGG00000009036	-	86	88.043	Periophthalmus_magnuspinnatus
ENSCVAG00000000504	-	68	97.468	ENSPMEG00000011776	-	99	98.718	Poecilia_mexicana
ENSCVAG00000000504	-	68	97.468	ENSPMEG00000002615	-	99	98.718	Poecilia_mexicana
ENSCVAG00000000504	-	100	76.371	ENSPNYG00000005058	-	96	82.773	Pundamilia_nyererei
ENSCVAG00000000504	-	68	97.468	ENSPNAG00000005888	-	76	97.468	Pygocentrus_nattereri
ENSCVAG00000000504	-	99	52.479	ENSRROG00000041543	-	51	53.112	Rhinopithecus_roxellana
ENSCVAG00000000504	-	67	93.590	ENSSBOG00000019884	SRRM1	99	93.590	Saimiri_boliviensis_boliviensis
ENSCVAG00000000504	-	99	76.151	ENSSMAG00000009318	-	97	80.342	Scophthalmus_maximus
ENSCVAG00000000504	-	66	78.481	ENSSLDG00000003901	-	79	79.747	Seriola_lalandi_dorsalis
ENSCVAG00000000504	-	62	93.056	ENSTGUG00000016669	-	100	93.056	Taeniopygia_guttata
ENSCVAG00000000504	-	68	93.671	ENSUAMG00000011740	-	88	93.671	Ursus_americanus