EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000506 (Gene tree)
Gene ID: 107089827
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 20524 bases
Position: chrKL652514.1:1075311-1095834
Accession: 107089827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000016523	AARP2CN	PF08142.12	3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000024925	-	2623	XM_015382829	ENSCVAP00000016523	824 (aa)	XP_015238315	UPI000742966B

Gene Model

Click here to download ENSCVAG00000000506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000506's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000506	tsr1	99	55.947	ENSG00000167721	TSR1	99	55.825	Homo_sapiens
ENSCVAG00000000506	tsr1	100	84.431	ENSAPOG00000020891	tsr1	100	85.269	Acanthochromis_polyacanthus
ENSCVAG00000000506	tsr1	99	54.524	ENSAMEG00000007599	TSR1	99	52.927	Ailuropoda_melanoleuca
ENSCVAG00000000506	tsr1	100	82.488	ENSACIG00000007090	tsr1	100	80.952	Amphilophus_citrinellus
ENSCVAG00000000506	tsr1	100	84.597	ENSAOCG00000023284	tsr1	100	85.199	Amphiprion_ocellaris
ENSCVAG00000000506	tsr1	93	84.496	ENSAPEG00000008452	tsr1	100	85.142	Amphiprion_percula
ENSCVAG00000000506	tsr1	100	83.035	ENSATEG00000021961	tsr1	100	82.676	Anabas_testudineus
ENSCVAG00000000506	tsr1	90	57.775	ENSAPLG00000013422	TSR1	98	57.333	Anas_platyrhynchos
ENSCVAG00000000506	tsr1	71	50.000	ENSACAG00000000859	TSR1	92	49.833	Anolis_carolinensis
ENSCVAG00000000506	tsr1	99	55.636	ENSANAG00000031071	TSR1	99	56.250	Aotus_nancymaae
ENSCVAG00000000506	tsr1	100	84.560	ENSACLG00000007595	tsr1	99	84.439	Astatotilapia_calliptera
ENSCVAG00000000506	tsr1	50	71.667	ENSAMXG00000008470	tsr1	89	71.667	Astyanax_mexicanus
ENSCVAG00000000506	tsr1	99	56.068	ENSBTAG00000004225	TSR1	99	56.590	Bos_taurus
ENSCVAG00000000506	tsr1	96	40.470	WBGene00006497	tag-151	96	40.617	Caenorhabditis_elegans
ENSCVAG00000000506	tsr1	99	54.369	ENSCJAG00000012456	TSR1	99	54.791	Callithrix_jacchus
ENSCVAG00000000506	tsr1	89	52.547	ENSCAFG00000019273	-	100	56.112	Canis_familiaris
ENSCVAG00000000506	tsr1	99	54.733	ENSCAFG00000002106	-	99	54.348	Canis_familiaris
ENSCVAG00000000506	tsr1	99	54.733	ENSCAFG00020009728	TSR1	99	54.469	Canis_lupus_dingo
ENSCVAG00000000506	tsr1	99	56.364	ENSCHIG00000023935	TSR1	99	56.763	Capra_hircus
ENSCVAG00000000506	tsr1	99	55.529	ENSTSYG00000005468	TSR1	99	55.301	Carlito_syrichta
ENSCVAG00000000506	tsr1	92	54.188	ENSCPOG00000014833	TSR1	99	54.722	Cavia_porcellus
ENSCVAG00000000506	tsr1	92	54.308	ENSCCAG00000028962	TSR1	98	54.379	Cebus_capucinus
ENSCVAG00000000506	tsr1	98	55.528	ENSCATG00000044262	TSR1	98	55.966	Cercocebus_atys
ENSCVAG00000000506	tsr1	99	55.043	ENSCLAG00000005567	TSR1	99	55.462	Chinchilla_lanigera
ENSCVAG00000000506	tsr1	98	55.651	ENSCSAG00000013788	TSR1	98	56.089	Chlorocebus_sabaeus
ENSCVAG00000000506	tsr1	98	55.501	ENSCPBG00000020363	TSR1	97	55.383	Chrysemys_picta_bellii
ENSCVAG00000000506	tsr1	96	45.387	ENSCING00000020658	-	99	44.704	Ciona_intestinalis
ENSCVAG00000000506	tsr1	96	44.900	ENSCSAVG00000001875	-	100	44.802	Ciona_savignyi
ENSCVAG00000000506	tsr1	98	52.399	ENSCANG00000033056	TSR1	98	51.784	Colobus_angolensis_palliatus
ENSCVAG00000000506	tsr1	99	54.369	ENSCGRG00001023942	Tsr1	99	54.710	Cricetulus_griseus_chok1gshd
ENSCVAG00000000506	tsr1	99	51.285	ENSCGRG00000013015	Tsr1	99	51.766	Cricetulus_griseus_crigri
ENSCVAG00000000506	tsr1	100	76.691	ENSCSEG00000013009	tsr1	99	77.295	Cynoglossus_semilaevis
ENSCVAG00000000506	tsr1	100	72.343	ENSDARG00000007744	tsr1	100	72.467	Danio_rerio
ENSCVAG00000000506	tsr1	99	57.108	ENSDNOG00000004715	TSR1	99	57.550	Dasypus_novemcinctus
ENSCVAG00000000506	tsr1	99	54.733	ENSDORG00000016371	-	99	54.940	Dipodomys_ordii
ENSCVAG00000000506	tsr1	96	49.180	ENSDORG00000023234	-	99	49.623	Dipodomys_ordii
ENSCVAG00000000506	tsr1	96	43.548	FBgn0037073	Tsr1	96	42.770	Drosophila_melanogaster
ENSCVAG00000000506	tsr1	89	67.213	ENSETEG00000017534	TSR1	88	67.213	Echinops_telfairi
ENSCVAG00000000506	tsr1	94	51.519	ENSEBUG00000013731	TSR1	97	51.519	Eptatretus_burgeri
ENSCVAG00000000506	tsr1	99	56.092	ENSEASG00005009302	TSR1	98	55.808	Equus_asinus_asinus
ENSCVAG00000000506	tsr1	99	56.204	ENSECAG00000009114	TSR1	99	55.918	Equus_caballus
ENSCVAG00000000506	tsr1	100	74.639	ENSELUG00000020984	tsr1	96	74.611	Esox_lucius
ENSCVAG00000000506	tsr1	99	54.988	ENSFCAG00000006313	TSR1	99	55.181	Felis_catus
ENSCVAG00000000506	tsr1	99	58.495	ENSFALG00000006532	TSR1	99	58.131	Ficedula_albicollis
ENSCVAG00000000506	tsr1	99	55.596	ENSFDAG00000006038	TSR1	99	55.109	Fukomys_damarensis
ENSCVAG00000000506	tsr1	100	89.076	ENSFHEG00000003626	tsr1	99	89.556	Fundulus_heteroclitus
ENSCVAG00000000506	tsr1	100	72.957	ENSGMOG00000010336	tsr1	100	72.957	Gadus_morhua
ENSCVAG00000000506	tsr1	100	88.702	ENSGAFG00000012993	tsr1	99	88.101	Gambusia_affinis
ENSCVAG00000000506	tsr1	100	79.570	ENSGACG00000010843	tsr1	100	79.570	Gasterosteus_aculeatus
ENSCVAG00000000506	tsr1	98	56.235	ENSGAGG00000025619	-	99	55.596	Gopherus_agassizii
ENSCVAG00000000506	tsr1	99	56.189	ENSGGOG00000001704	TSR1	99	55.947	Gorilla_gorilla
ENSCVAG00000000506	tsr1	100	84.477	ENSHBUG00000017904	tsr1	100	84.496	Haplochromis_burtoni
ENSCVAG00000000506	tsr1	96	49.121	ENSHGLG00000015688	-	98	48.241	Heterocephalus_glaber_female
ENSCVAG00000000506	tsr1	99	55.448	ENSHGLG00000012806	-	99	55.327	Heterocephalus_glaber_female
ENSCVAG00000000506	tsr1	99	55.448	ENSHGLG00100015392	TSR1	99	55.327	Heterocephalus_glaber_male
ENSCVAG00000000506	tsr1	100	78.356	ENSHCOG00000001432	tsr1	100	78.235	Hippocampus_comes
ENSCVAG00000000506	tsr1	99	72.782	ENSIPUG00000004618	tsr1	99	73.501	Ictalurus_punctatus
ENSCVAG00000000506	tsr1	99	55.772	ENSSTOG00000011819	TSR1	99	56.010	Ictidomys_tridecemlineatus
ENSCVAG00000000506	tsr1	91	54.630	ENSJJAG00000019505	Tsr1	95	53.604	Jaculus_jaculus
ENSCVAG00000000506	tsr1	100	81.611	ENSKMAG00000005763	tsr1	99	82.572	Kryptolebias_marmoratus
ENSCVAG00000000506	tsr1	100	83.234	ENSLBEG00000021823	tsr1	99	83.832	Labrus_bergylta
ENSCVAG00000000506	tsr1	100	57.314	ENSLACG00000002197	TSR1	100	57.177	Latimeria_chalumnae
ENSCVAG00000000506	tsr1	93	75.342	ENSLOCG00000006491	TSR1	99	75.342	Lepisosteus_oculatus
ENSCVAG00000000506	tsr1	98	55.774	ENSMFAG00000021330	TSR1	98	56.212	Macaca_fascicularis
ENSCVAG00000000506	tsr1	98	55.651	ENSMMUG00000017519	TSR1	98	56.089	Macaca_mulatta
ENSCVAG00000000506	tsr1	98	55.651	ENSMNEG00000031382	TSR1	98	56.089	Macaca_nemestrina
ENSCVAG00000000506	tsr1	98	55.405	ENSMLEG00000036733	TSR1	98	55.843	Mandrillus_leucophaeus
ENSCVAG00000000506	tsr1	100	83.433	ENSMAMG00000017918	tsr1	99	84.148	Mastacembelus_armatus
ENSCVAG00000000506	tsr1	100	84.116	ENSMZEG00005007477	tsr1	100	83.995	Maylandia_zebra
ENSCVAG00000000506	tsr1	99	56.258	ENSMGAG00000005576	TSR1	99	55.489	Meleagris_gallopavo
ENSCVAG00000000506	tsr1	99	56.136	ENSMICG00000012943	TSR1	99	56.174	Microcebus_murinus
ENSCVAG00000000506	tsr1	99	55.097	ENSMOCG00000022764	Tsr1	99	54.655	Microtus_ochrogaster
ENSCVAG00000000506	tsr1	100	82.892	ENSMMOG00000014280	tsr1	100	83.012	Mola_mola
ENSCVAG00000000506	tsr1	98	57.055	ENSMODG00000010658	TSR1	99	56.326	Monodelphis_domestica
ENSCVAG00000000506	tsr1	100	84.293	ENSMALG00000011681	tsr1	100	84.412	Monopterus_albus
ENSCVAG00000000506	tsr1	99	55.461	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.655	Mus_caroli
ENSCVAG00000000506	tsr1	99	56.068	ENSMUSG00000038335	Tsr1	99	55.260	Mus_musculus
ENSCVAG00000000506	tsr1	99	56.189	MGP_PahariEiJ_G0017864	Tsr1	99	55.556	Mus_pahari
ENSCVAG00000000506	tsr1	99	55.947	MGP_SPRETEiJ_G0017570	Tsr1	99	55.139	Mus_spretus
ENSCVAG00000000506	tsr1	81	57.567	ENSMPUG00000013000	TSR1	100	56.725	Mustela_putorius_furo
ENSCVAG00000000506	tsr1	98	56.829	ENSMLUG00000003505	TSR1	99	56.454	Myotis_lucifugus
ENSCVAG00000000506	tsr1	100	84.375	ENSNBRG00000020728	tsr1	99	84.375	Neolamprologus_brichardi
ENSCVAG00000000506	tsr1	99	51.893	ENSNLEG00000017184	TSR1	99	52.676	Nomascus_leucogenys
ENSCVAG00000000506	tsr1	99	53.091	ENSMEUG00000015828	TSR1	99	53.333	Notamacropus_eugenii
ENSCVAG00000000506	tsr1	100	82.660	ENSONIG00000013131	tsr1	100	83.135	Oreochromis_niloticus
ENSCVAG00000000506	tsr1	98	56.569	ENSOCUG00000014256	TSR1	99	56.727	Oryctolagus_cuniculus
ENSCVAG00000000506	tsr1	100	83.053	ENSORLG00000004926	tsr1	99	83.053	Oryzias_latipes
ENSCVAG00000000506	tsr1	100	82.572	ENSORLG00020008792	tsr1	99	82.452	Oryzias_latipes_hni
ENSCVAG00000000506	tsr1	100	83.053	ENSORLG00015013838	tsr1	99	83.053	Oryzias_latipes_hsok
ENSCVAG00000000506	tsr1	100	82.692	ENSOMEG00000004830	tsr1	99	82.572	Oryzias_melastigma
ENSCVAG00000000506	tsr1	99	55.288	ENSOGAG00000004492	TSR1	99	54.589	Otolemur_garnettii
ENSCVAG00000000506	tsr1	99	56.919	ENSOARG00000015437	TSR1	98	56.595	Ovis_aries
ENSCVAG00000000506	tsr1	99	55.947	ENSPPAG00000036355	TSR1	99	55.825	Pan_paniscus
ENSCVAG00000000506	tsr1	99	54.866	ENSPPRG00000015519	-	99	55.060	Panthera_pardus
ENSCVAG00000000506	tsr1	99	54.866	ENSPTIG00000010608	TSR1	99	55.060	Panthera_tigris_altaica
ENSCVAG00000000506	tsr1	99	55.947	ENSPTRG00000008547	TSR1	99	55.825	Pan_troglodytes
ENSCVAG00000000506	tsr1	98	52.891	ENSPANG00000024463	TSR1	98	53.941	Papio_anubis
ENSCVAG00000000506	tsr1	99	70.424	ENSPKIG00000013972	tsr1	99	70.303	Paramormyrops_kingsleyae
ENSCVAG00000000506	tsr1	87	55.679	ENSPSIG00000018258	TSR1	99	54.830	Pelodiscus_sinensis
ENSCVAG00000000506	tsr1	99	79.515	ENSPMGG00000011577	tsr1	99	78.909	Periophthalmus_magnuspinnatus
ENSCVAG00000000506	tsr1	99	54.192	ENSPEMG00000018033	Tsr1	99	54.237	Peromyscus_maniculatus_bairdii
ENSCVAG00000000506	tsr1	99	56.848	ENSPCIG00000009357	TSR1	97	56.627	Phascolarctos_cinereus
ENSCVAG00000000506	tsr1	100	87.229	ENSPFOG00000004483	TSR1	100	87.711	Poecilia_formosa
ENSCVAG00000000506	tsr1	100	87.679	ENSPLAG00000022320	tsr1	99	88.158	Poecilia_latipinna
ENSCVAG00000000506	tsr1	100	87.919	ENSPMEG00000004577	tsr1	99	88.278	Poecilia_mexicana
ENSCVAG00000000506	tsr1	97	88.547	ENSPREG00000010354	tsr1	96	88.807	Poecilia_reticulata
ENSCVAG00000000506	tsr1	99	50.419	ENSPPYG00000007792	TSR1	99	50.839	Pongo_abelii
ENSCVAG00000000506	tsr1	51	65.000	ENSPCAG00000012973	-	71	60.465	Procavia_capensis
ENSCVAG00000000506	tsr1	99	55.664	ENSPCOG00000017928	TSR1	99	55.055	Propithecus_coquereli
ENSCVAG00000000506	tsr1	99	55.164	ENSPVAG00000002162	TSR1	99	55.181	Pteropus_vampyrus
ENSCVAG00000000506	tsr1	100	84.801	ENSPNYG00000016163	tsr1	99	84.680	Pundamilia_nyererei
ENSCVAG00000000506	tsr1	100	73.127	ENSPNAG00000008659	tsr1	100	73.571	Pygocentrus_nattereri
ENSCVAG00000000506	tsr1	99	55.218	ENSRNOG00000002980	Tsr1	99	54.928	Rattus_norvegicus
ENSCVAG00000000506	tsr1	98	55.774	ENSRBIG00000040016	TSR1	98	55.000	Rhinopithecus_bieti
ENSCVAG00000000506	tsr1	98	55.651	ENSRROG00000030361	TSR1	98	54.878	Rhinopithecus_roxellana
ENSCVAG00000000506	tsr1	97	31.212	YDL060W	-	98	30.889	Saccharomyces_cerevisiae
ENSCVAG00000000506	tsr1	99	55.704	ENSSBOG00000020785	TSR1	99	55.828	Saimiri_boliviensis_boliviensis
ENSCVAG00000000506	tsr1	99	57.333	ENSSHAG00000011394	TSR1	99	57.126	Sarcophilus_harrisii
ENSCVAG00000000506	tsr1	99	73.091	ENSSFOG00015005455	tsr1	99	73.091	Scleropages_formosus
ENSCVAG00000000506	tsr1	100	81.273	ENSSMAG00000009504	tsr1	100	81.873	Scophthalmus_maximus
ENSCVAG00000000506	tsr1	100	84.754	ENSSDUG00000012074	tsr1	99	85.234	Seriola_dumerili
ENSCVAG00000000506	tsr1	100	85.439	ENSSLDG00000002031	tsr1	99	85.439	Seriola_lalandi_dorsalis
ENSCVAG00000000506	tsr1	92	56.000	ENSSARG00000000759	TSR1	93	56.000	Sorex_araneus
ENSCVAG00000000506	tsr1	99	57.419	ENSSPUG00000007042	TSR1	99	57.678	Sphenodon_punctatus
ENSCVAG00000000506	tsr1	100	83.771	ENSSPAG00000021951	tsr1	100	84.368	Stegastes_partitus
ENSCVAG00000000506	tsr1	99	56.675	ENSSSCG00000038534	TSR1	99	56.432	Sus_scrofa
ENSCVAG00000000506	tsr1	90	58.579	ENSTGUG00000005883	TSR1	100	59.115	Taeniopygia_guttata
ENSCVAG00000000506	tsr1	100	80.458	ENSTRUG00000004665	tsr1	100	81.062	Takifugu_rubripes
ENSCVAG00000000506	tsr1	99	80.918	ENSTNIG00000016196	tsr1	100	81.265	Tetraodon_nigroviridis
ENSCVAG00000000506	tsr1	66	71.875	ENSTBEG00000015275	-	66	71.875	Tupaia_belangeri
ENSCVAG00000000506	tsr1	99	56.501	ENSTTRG00000001177	TSR1	99	56.659	Tursiops_truncatus
ENSCVAG00000000506	tsr1	99	55.394	ENSUAMG00000025160	TSR1	99	54.557	Ursus_americanus
ENSCVAG00000000506	tsr1	96	55.472	ENSUMAG00000009294	TSR1	98	54.443	Ursus_maritimus
ENSCVAG00000000506	tsr1	83	50.434	ENSVPAG00000000228	TSR1	99	49.140	Vicugna_pacos
ENSCVAG00000000506	tsr1	99	54.854	ENSVVUG00000021767	TSR1	99	54.589	Vulpes_vulpes
ENSCVAG00000000506	tsr1	100	52.273	ENSXETG00000023797	tsr1	100	51.790	Xenopus_tropicalis
ENSCVAG00000000506	tsr1	100	87.500	ENSXCOG00000009635	tsr1	100	86.915	Xiphophorus_couchianus
ENSCVAG00000000506	tsr1	100	88.568	ENSXMAG00000001397	tsr1	97	88.688	Xiphophorus_maculatus