EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000602 (Gene tree)
Gene ID: 107090667
Gene Symbol: zfhx3
Alias: fd23d06|fj32b02|im:7148790|wu:fd23d06|wu:fj32b02
Full Name: zinc finger homeobox 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 141274 bases
Position: chrKL652807.1:468839-610112
Accession: 107090667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019763	zf-C2H2	PF00096.26	3.6e-10	1	2
ENSCVAP00000019763	zf-C2H2	PF00096.26	3.6e-10	2	2
ENSCVAP00000032832	zf-C2H2	PF00096.26	3.6e-10	1	2
ENSCVAP00000032832	zf-C2H2	PF00096.26	3.6e-10	2	2
ENSCVAP00000019763	zf-met	PF12874.7	5.1e-07	1	1
ENSCVAP00000032832	zf-met	PF12874.7	5.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029002	-	12063	XM_015384201	ENSCVAP00000032832	3866 (aa)	XP_015239687	UPI0007427B5E
ENSCVAT00000033293	-	11770	XM_015384202	ENSCVAP00000019763	3866 (aa)	XP_015239688	UPI0007427B5E

Gene Model

Click here to download ENSCVAG00000000602's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000602's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000602	zfhx3	100	90.309	ENSAPOG00000010102	zfhx3	100	90.490	Acanthochromis_polyacanthus
ENSCVAG00000000602	zfhx3	96	63.694	ENSAMEG00000002197	ZFHX3	72	67.440	Ailuropoda_melanoleuca
ENSCVAG00000000602	zfhx3	100	88.771	ENSACIG00000000652	zfhx3	100	88.462	Amphilophus_citrinellus
ENSCVAG00000000602	zfhx3	100	90.170	ENSAPEG00000011530	zfhx3	100	90.377	Amphiprion_percula
ENSCVAG00000000602	zfhx3	100	89.110	ENSATEG00000004640	zfhx3	100	88.826	Anabas_testudineus
ENSCVAG00000000602	zfhx3	83	65.349	ENSAPLG00000002327	ZFHX3	51	64.866	Anas_platyrhynchos
ENSCVAG00000000602	zfhx3	100	61.565	ENSANAG00000033325	ZFHX3	97	62.744	Aotus_nancymaae
ENSCVAG00000000602	zfhx3	100	88.709	ENSACLG00000001914	zfhx3	100	88.080	Astatotilapia_calliptera
ENSCVAG00000000602	zfhx3	100	79.826	ENSAMXG00000004340	zfhx3	100	79.862	Astyanax_mexicanus
ENSCVAG00000000602	zfhx3	95	63.833	ENSBTAG00000014636	ZFHX3	86	64.119	Bos_taurus
ENSCVAG00000000602	zfhx3	100	62.186	ENSCJAG00000043080	ZFHX3	72	68.119	Callithrix_jacchus
ENSCVAG00000000602	zfhx3	64	63.586	ENSCHIG00000018446	ZFHX3	100	63.413	Capra_hircus
ENSCVAG00000000602	zfhx3	100	61.979	ENSCCAG00000026346	ZFHX3	95	66.035	Cebus_capucinus
ENSCVAG00000000602	zfhx3	100	61.839	ENSCATG00000022545	ZFHX3	86	64.100	Cercocebus_atys
ENSCVAG00000000602	zfhx3	100	62.001	ENSCSAG00000004171	ZFHX3	86	64.544	Chlorocebus_sabaeus
ENSCVAG00000000602	zfhx3	100	62.121	ENSCANG00000034216	ZFHX3	86	64.201	Colobus_angolensis_palliatus
ENSCVAG00000000602	zfhx3	87	64.862	ENSCGRG00001012831	Zfhx3	83	65.495	Cricetulus_griseus_chok1gshd
ENSCVAG00000000602	zfhx3	99	64.332	ENSCGRG00000001001	Zfhx3	83	64.862	Cricetulus_griseus_crigri
ENSCVAG00000000602	zfhx3	100	84.385	ENSCSEG00000001762	zfhx3	100	83.638	Cynoglossus_semilaevis
ENSCVAG00000000602	zfhx3	100	78.533	ENSDARG00000103057	zfhx3	100	79.218	Danio_rerio
ENSCVAG00000000602	zfhx3	100	62.736	ENSEASG00005021387	ZFHX3	86	64.844	Equus_asinus_asinus
ENSCVAG00000000602	zfhx3	100	62.654	ENSECAG00000022984	ZFHX3	86	65.123	Equus_caballus
ENSCVAG00000000602	zfhx3	100	81.800	ENSELUG00000014311	zfhx3	100	81.263	Esox_lucius
ENSCVAG00000000602	zfhx3	100	62.374	ENSFCAG00000023839	ZFHX3	86	64.932	Felis_catus
ENSCVAG00000000602	zfhx3	100	93.705	ENSFHEG00000013474	zfhx3	100	93.808	Fundulus_heteroclitus
ENSCVAG00000000602	zfhx3	100	80.680	ENSGMOG00000002909	zfhx3	100	80.340	Gadus_morhua
ENSCVAG00000000602	zfhx3	100	93.600	ENSGAFG00000017278	zfhx3	100	93.832	Gambusia_affinis
ENSCVAG00000000602	zfhx3	100	84.405	ENSGACG00000015779	zfhx3	100	84.327	Gasterosteus_aculeatus
ENSCVAG00000000602	zfhx3	96	63.428	ENSGAGG00000002102	ZFHX3	52	63.509	Gopherus_agassizii
ENSCVAG00000000602	zfhx3	95	62.629	ENSGGOG00000012083	ZFHX3	86	65.138	Gorilla_gorilla
ENSCVAG00000000602	zfhx3	100	88.780	ENSHBUG00000013200	zfhx3	100	88.132	Haplochromis_burtoni
ENSCVAG00000000602	zfhx3	100	84.764	ENSHCOG00000003135	zfhx3	100	84.635	Hippocampus_comes
ENSCVAG00000000602	zfhx3	100	78.484	ENSIPUG00000006119	zfhx3	100	78.579	Ictalurus_punctatus
ENSCVAG00000000602	zfhx3	100	89.781	ENSKMAG00000006781	zfhx3	100	89.902	Kryptolebias_marmoratus
ENSCVAG00000000602	zfhx3	100	87.848	ENSLBEG00000026326	zfhx3	100	87.384	Labrus_bergylta
ENSCVAG00000000602	zfhx3	100	76.302	ENSLOCG00000004206	zfhx3	100	76.888	Lepisosteus_oculatus
ENSCVAG00000000602	zfhx3	100	62.541	ENSLAFG00000017476	ZFHX3	96	63.651	Loxodonta_africana
ENSCVAG00000000602	zfhx3	100	62.224	ENSMFAG00000034225	ZFHX3	86	64.504	Macaca_fascicularis
ENSCVAG00000000602	zfhx3	100	62.199	ENSMMUG00000021041	ZFHX3	86	64.093	Macaca_mulatta
ENSCVAG00000000602	zfhx3	100	62.180	ENSMNEG00000030137	ZFHX3	86	64.504	Macaca_nemestrina
ENSCVAG00000000602	zfhx3	100	62.105	ENSMLEG00000042563	ZFHX3	86	64.586	Mandrillus_leucophaeus
ENSCVAG00000000602	zfhx3	100	89.301	ENSMAMG00000021509	zfhx3	100	89.035	Mastacembelus_armatus
ENSCVAG00000000602	zfhx3	100	88.752	ENSMZEG00005014216	zfhx3	100	88.080	Maylandia_zebra
ENSCVAG00000000602	zfhx3	65	70.210	ENSMGAG00000008764	ZFHX3	85	69.794	Meleagris_gallopavo
ENSCVAG00000000602	zfhx3	87	65.306	ENSMICG00000003537	ZFHX3	97	63.356	Microcebus_murinus
ENSCVAG00000000602	zfhx3	100	87.339	ENSMMOG00000016551	zfhx3	100	87.365	Mola_mola
ENSCVAG00000000602	zfhx3	100	88.513	ENSMALG00000021055	zfhx3	100	88.358	Monopterus_albus
ENSCVAG00000000602	zfhx3	86	63.254	ENSMUSG00000038872	Zfhx3	71	66.797	Mus_musculus
ENSCVAG00000000602	zfhx3	100	60.938	MGP_SPRETEiJ_G0032657	Zfhx3	82	65.560	Mus_spretus
ENSCVAG00000000602	zfhx3	95	64.191	ENSMLUG00000016100	ZFHX3	97	63.451	Myotis_lucifugus
ENSCVAG00000000602	zfhx3	100	61.424	ENSNGAG00000001724	Zfhx3	97	62.706	Nannospalax_galili
ENSCVAG00000000602	zfhx3	100	88.332	ENSNBRG00000010822	zfhx3	100	88.436	Neolamprologus_brichardi
ENSCVAG00000000602	zfhx3	84	80.682	ENSNLEG00000032567	ZFHX3	81	80.682	Nomascus_leucogenys
ENSCVAG00000000602	zfhx3	59	90.654	ENSONIG00000005914	zfhx3	99	89.718	Oreochromis_niloticus
ENSCVAG00000000602	zfhx3	86	63.570	ENSOANG00000005084	ZFHX3	83	66.151	Ornithorhynchus_anatinus
ENSCVAG00000000602	zfhx3	87	65.373	ENSOCUG00000017910	-	98	65.161	Oryctolagus_cuniculus
ENSCVAG00000000602	zfhx3	100	86.204	ENSORLG00000007874	zfhx3	100	85.843	Oryzias_latipes
ENSCVAG00000000602	zfhx3	100	86.075	ENSORLG00020009729	zfhx3	100	85.817	Oryzias_latipes_hni
ENSCVAG00000000602	zfhx3	100	86.333	ENSORLG00015007912	zfhx3	100	86.146	Oryzias_latipes_hsok
ENSCVAG00000000602	zfhx3	100	87.152	ENSOMEG00000001800	zfhx3	100	86.662	Oryzias_melastigma
ENSCVAG00000000602	zfhx3	100	61.544	ENSPPRG00000005184	ZFHX3	86	64.456	Panthera_pardus
ENSCVAG00000000602	zfhx3	100	62.104	ENSPTRG00000008340	ZFHX3	72	67.617	Pan_troglodytes
ENSCVAG00000000602	zfhx3	100	62.224	ENSPANG00000010456	ZFHX3	86	64.661	Papio_anubis
ENSCVAG00000000602	zfhx3	96	76.393	ENSPKIG00000009598	zfhx3	99	75.875	Paramormyrops_kingsleyae
ENSCVAG00000000602	zfhx3	99	73.007	ENSPKIG00000001525	-	100	72.972	Paramormyrops_kingsleyae
ENSCVAG00000000602	zfhx3	100	82.813	ENSPMGG00000006062	zfhx3	99	83.690	Periophthalmus_magnuspinnatus
ENSCVAG00000000602	zfhx3	100	93.657	ENSPFOG00000001702	zfhx3	100	93.553	Poecilia_formosa
ENSCVAG00000000602	zfhx3	100	93.566	ENSPLAG00000018955	zfhx3	100	93.695	Poecilia_latipinna
ENSCVAG00000000602	zfhx3	100	93.528	ENSPMEG00000022333	zfhx3	100	93.502	Poecilia_mexicana
ENSCVAG00000000602	zfhx3	100	92.739	ENSPREG00000023212	zfhx3	100	93.178	Poecilia_reticulata
ENSCVAG00000000602	zfhx3	83	66.534	ENSPPYG00000007513	ZFHX3	99	64.563	Pongo_abelii
ENSCVAG00000000602	zfhx3	87	64.213	ENSPCAG00000010600	ZFHX3	82	67.829	Procavia_capensis
ENSCVAG00000000602	zfhx3	95	64.375	ENSPCOG00000025382	ZFHX3	97	63.595	Propithecus_coquereli
ENSCVAG00000000602	zfhx3	96	64.117	ENSPVAG00000006664	ZFHX3	92	63.183	Pteropus_vampyrus
ENSCVAG00000000602	zfhx3	100	88.167	ENSPNYG00000013409	zfhx3	100	88.244	Pundamilia_nyererei
ENSCVAG00000000602	zfhx3	86	64.654	ENSRBIG00000031579	ZFHX3	86	63.720	Rhinopithecus_bieti
ENSCVAG00000000602	zfhx3	86	65.193	ENSRROG00000039904	ZFHX3	86	63.956	Rhinopithecus_roxellana
ENSCVAG00000000602	zfhx3	100	74.063	ENSSFOG00015019511	zfhx3	99	74.868	Scleropages_formosus
ENSCVAG00000000602	zfhx3	100	76.081	ENSSFOG00015014986	zfhx3	99	79.000	Scleropages_formosus
ENSCVAG00000000602	zfhx3	100	87.209	ENSSMAG00000000110	zfhx3	100	86.493	Scophthalmus_maximus
ENSCVAG00000000602	zfhx3	100	88.912	ENSSDUG00000017102	zfhx3	100	89.453	Seriola_dumerili
ENSCVAG00000000602	zfhx3	100	89.455	ENSSLDG00000013212	zfhx3	100	89.378	Seriola_lalandi_dorsalis
ENSCVAG00000000602	zfhx3	100	90.000	ENSSPAG00000002113	zfhx3	100	90.026	Stegastes_partitus
ENSCVAG00000000602	zfhx3	100	84.609	ENSTRUG00000017601	zfhx3	100	84.506	Takifugu_rubripes
ENSCVAG00000000602	zfhx3	100	94.212	ENSXMAG00000027288	zfhx3	100	94.109	Xiphophorus_maculatus