EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000672 (Gene tree)
Gene ID: 107089530
Gene Symbol: rsl1d1
Alias: si:dkey-16i5.10
Full Name: ribosomal L1 domain-containing protein 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10888 bases
Position: chrKL652756.1:299453-310340
Accession: 107089530
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000001480	Ribosomal_L1	PF00687.21	8.8e-50	1	1
ENSCVAP00000001488	Ribosomal_L1	PF00687.21	8.8e-50	1	1
ENSCVAP00000020823	Ribosomal_L1	PF00687.21	8.8e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000013329	-	1627	-	ENSCVAP00000001488	355 (aa)	-	-
ENSCVAT00000013340	-	1627	-	ENSCVAP00000001480	355 (aa)	-	-
ENSCVAT00000013348	-	1627	XM_015382375	ENSCVAP00000020823	355 (aa)	XP_015237861	-

Gene Model

Click here to download ENSCVAG00000000672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000672	rsl1d1	68	50.622	ENSG00000171490	RSL1D1	100	58.163	Homo_sapiens
ENSCVAG00000000672	rsl1d1	96	72.346	ENSAPOG00000004544	rsl1d1	99	73.497	Acanthochromis_polyacanthus
ENSCVAG00000000672	rsl1d1	67	48.117	ENSAMEG00000009570	RSL1D1	55	45.421	Ailuropoda_melanoleuca
ENSCVAG00000000672	rsl1d1	87	68.285	ENSACIG00000006608	rsl1d1	93	69.579	Amphilophus_citrinellus
ENSCVAG00000000672	rsl1d1	96	74.074	ENSAOCG00000001548	rsl1d1	99	72.981	Amphiprion_ocellaris
ENSCVAG00000000672	rsl1d1	96	74.074	ENSAPEG00000003334	rsl1d1	99	72.981	Amphiprion_percula
ENSCVAG00000000672	rsl1d1	85	70.497	ENSATEG00000009247	rsl1d1	99	67.914	Anabas_testudineus
ENSCVAG00000000672	rsl1d1	81	49.547	ENSAPLG00000004451	RSL1D1	54	59.336	Anas_platyrhynchos
ENSCVAG00000000672	rsl1d1	68	49.378	ENSANAG00000028185	-	60	47.925	Aotus_nancymaae
ENSCVAG00000000672	rsl1d1	68	50.622	ENSANAG00000034590	-	57	46.643	Aotus_nancymaae
ENSCVAG00000000672	rsl1d1	95	71.023	ENSACLG00000017535	rsl1d1	97	71.023	Astatotilapia_calliptera
ENSCVAG00000000672	rsl1d1	92	56.286	ENSAMXG00000008624	rsl1d1	95	55.342	Astyanax_mexicanus
ENSCVAG00000000672	rsl1d1	70	50.000	ENSBTAG00000014588	RSL1D1	53	50.000	Bos_taurus
ENSCVAG00000000672	rsl1d1	68	50.207	ENSCJAG00000008375	-	50	50.207	Callithrix_jacchus
ENSCVAG00000000672	rsl1d1	68	50.207	ENSCJAG00000042606	-	50	50.207	Callithrix_jacchus
ENSCVAG00000000672	rsl1d1	83	41.714	ENSCAFG00000018865	RSL1D1	58	46.316	Canis_familiaris
ENSCVAG00000000672	rsl1d1	83	42.229	ENSCAFG00020024488	-	58	46.099	Canis_lupus_dingo
ENSCVAG00000000672	rsl1d1	68	35.950	ENSCAFG00020002457	-	55	35.612	Canis_lupus_dingo
ENSCVAG00000000672	rsl1d1	83	41.228	ENSCHIG00000018658	-	60	46.735	Capra_hircus
ENSCVAG00000000672	rsl1d1	95	41.341	ENSCHIG00000009867	-	62	47.794	Capra_hircus
ENSCVAG00000000672	rsl1d1	76	46.840	ENSTSYG00000009276	RSL1D1	55	46.840	Carlito_syrichta
ENSCVAG00000000672	rsl1d1	67	48.117	ENSCPOG00000010630	RSL1D1	51	48.117	Cavia_porcellus
ENSCVAG00000000672	rsl1d1	83	40.896	ENSCCAG00000031641	-	57	44.565	Cebus_capucinus
ENSCVAG00000000672	rsl1d1	68	45.643	ENSCCAG00000025197	-	57	43.774	Cebus_capucinus
ENSCVAG00000000672	rsl1d1	68	50.622	ENSCCAG00000017391	-	55	48.162	Cebus_capucinus
ENSCVAG00000000672	rsl1d1	68	49.583	ENSCATG00000031153	RSL1D1	56	49.378	Cercocebus_atys
ENSCVAG00000000672	rsl1d1	68	50.000	ENSCLAG00000010975	RSL1D1	56	47.925	Chinchilla_lanigera
ENSCVAG00000000672	rsl1d1	68	56.846	ENSCPBG00000004564	RSL1D1	93	56.459	Chrysemys_picta_bellii
ENSCVAG00000000672	rsl1d1	64	36.404	ENSCING00000011810	-	100	36.404	Ciona_intestinalis
ENSCVAG00000000672	rsl1d1	66	30.213	ENSCSAVG00000011797	-	69	30.213	Ciona_savignyi
ENSCVAG00000000672	rsl1d1	68	49.378	ENSCANG00000029202	RSL1D1	54	48.617	Colobus_angolensis_palliatus
ENSCVAG00000000672	rsl1d1	66	50.000	ENSCGRG00001014989	Rsl1d1	53	50.000	Cricetulus_griseus_chok1gshd
ENSCVAG00000000672	rsl1d1	66	50.000	ENSCGRG00000001905	Rsl1d1	53	50.000	Cricetulus_griseus_crigri
ENSCVAG00000000672	rsl1d1	89	66.563	ENSCSEG00000019693	rsl1d1	99	63.661	Cynoglossus_semilaevis
ENSCVAG00000000672	rsl1d1	90	62.112	ENSDARG00000055868	rsl1d1	83	62.379	Danio_rerio
ENSCVAG00000000672	rsl1d1	68	50.617	ENSDNOG00000004601	-	56	48.571	Dasypus_novemcinctus
ENSCVAG00000000672	rsl1d1	68	50.617	ENSDNOG00000040779	-	57	48.571	Dasypus_novemcinctus
ENSCVAG00000000672	rsl1d1	83	38.924	ENSDORG00000013432	-	72	41.000	Dipodomys_ordii
ENSCVAG00000000672	rsl1d1	66	47.479	ENSEBUG00000005400	-	57	47.479	Eptatretus_burgeri
ENSCVAG00000000672	rsl1d1	83	42.450	ENSEASG00005011499	RSL1D1	63	45.016	Equus_asinus_asinus
ENSCVAG00000000672	rsl1d1	83	41.880	ENSECAG00000025036	RSL1D1	63	44.373	Equus_caballus
ENSCVAG00000000672	rsl1d1	93	67.273	ENSELUG00000019243	rsl1d1	92	68.354	Esox_lucius
ENSCVAG00000000672	rsl1d1	83	41.429	ENSFCAG00000010114	RSL1D1	58	46.667	Felis_catus
ENSCVAG00000000672	rsl1d1	81	49.849	ENSFALG00000003869	RSL1D1	50	59.751	Ficedula_albicollis
ENSCVAG00000000672	rsl1d1	68	48.333	ENSFDAG00000011414	RSL1D1	54	48.333	Fukomys_damarensis
ENSCVAG00000000672	rsl1d1	99	73.504	ENSFHEG00000017235	rsl1d1	96	72.650	Fundulus_heteroclitus
ENSCVAG00000000672	rsl1d1	85	58.140	ENSGMOG00000013048	rsl1d1	97	58.140	Gadus_morhua
ENSCVAG00000000672	rsl1d1	69	58.367	ENSGALG00000033690	RSL1D1	72	51.104	Gallus_gallus
ENSCVAG00000000672	rsl1d1	99	70.556	ENSGAFG00000020794	rsl1d1	96	69.722	Gambusia_affinis
ENSCVAG00000000672	rsl1d1	96	60.588	ENSGACG00000004483	rsl1d1	88	61.587	Gasterosteus_aculeatus
ENSCVAG00000000672	rsl1d1	95	71.347	ENSHBUG00000001551	rsl1d1	96	71.347	Haplochromis_burtoni
ENSCVAG00000000672	rsl1d1	83	40.541	ENSHGLG00000006774	RSL1D1	75	42.515	Heterocephalus_glaber_female
ENSCVAG00000000672	rsl1d1	83	40.541	ENSHGLG00100017781	RSL1D1	75	42.515	Heterocephalus_glaber_male
ENSCVAG00000000672	rsl1d1	84	60.726	ENSHCOG00000015208	rsl1d1	86	60.726	Hippocampus_comes
ENSCVAG00000000672	rsl1d1	99	55.858	ENSIPUG00000001677	rsl1d1	86	58.896	Ictalurus_punctatus
ENSCVAG00000000672	rsl1d1	96	37.949	ENSJJAG00000012115	Rsl1d1	72	40.909	Jaculus_jaculus
ENSCVAG00000000672	rsl1d1	100	69.806	ENSKMAG00000021908	rsl1d1	100	70.166	Kryptolebias_marmoratus
ENSCVAG00000000672	rsl1d1	86	71.242	ENSLBEG00000001076	rsl1d1	99	66.949	Labrus_bergylta
ENSCVAG00000000672	rsl1d1	98	56.160	ENSLOCG00000007416	rsl1d1	73	60.714	Lepisosteus_oculatus
ENSCVAG00000000672	rsl1d1	95	40.633	ENSLAFG00000013664	RSL1D1	52	48.790	Loxodonta_africana
ENSCVAG00000000672	rsl1d1	68	50.000	ENSMMUG00000019632	RSL1D1	99	56.688	Macaca_mulatta
ENSCVAG00000000672	rsl1d1	68	50.207	ENSMLEG00000042058	RSL1D1	50	50.207	Mandrillus_leucophaeus
ENSCVAG00000000672	rsl1d1	96	68.347	ENSMAMG00000004385	rsl1d1	97	69.014	Mastacembelus_armatus
ENSCVAG00000000672	rsl1d1	95	71.307	ENSMZEG00005007150	rsl1d1	97	71.307	Maylandia_zebra
ENSCVAG00000000672	rsl1d1	81	52.733	ENSMGAG00000000863	RSL1D1	71	51.447	Meleagris_gallopavo
ENSCVAG00000000672	rsl1d1	83	40.964	ENSMOCG00000017724	Rsl1d1	76	42.470	Microtus_ochrogaster
ENSCVAG00000000672	rsl1d1	84	66.221	ENSMMOG00000003730	rsl1d1	100	66.221	Mola_mola
ENSCVAG00000000672	rsl1d1	83	43.072	ENSMODG00000004625	-	52	51.261	Monodelphis_domestica
ENSCVAG00000000672	rsl1d1	84	40.260	ENSMODG00000029494	-	55	45.570	Monodelphis_domestica
ENSCVAG00000000672	rsl1d1	97	65.847	ENSMALG00000009531	rsl1d1	98	66.575	Monopterus_albus
ENSCVAG00000000672	rsl1d1	83	41.617	ENSMUSG00000005846	Rsl1d1	58	45.693	Mus_musculus
ENSCVAG00000000672	rsl1d1	82	40.061	MGP_PahariEiJ_G0016164	Rsl1d1	66	42.244	Mus_pahari
ENSCVAG00000000672	rsl1d1	83	41.317	MGP_SPRETEiJ_G0021352	Rsl1d1	58	45.693	Mus_spretus
ENSCVAG00000000672	rsl1d1	67	49.791	ENSMPUG00000014548	RSL1D1	55	46.886	Mustela_putorius_furo
ENSCVAG00000000672	rsl1d1	66	46.186	ENSNGAG00000013578	-	52	46.186	Nannospalax_galili
ENSCVAG00000000672	rsl1d1	66	47.458	ENSNGAG00000009086	-	51	47.458	Nannospalax_galili
ENSCVAG00000000672	rsl1d1	95	70.423	ENSNBRG00000002777	rsl1d1	96	70.704	Neolamprologus_brichardi
ENSCVAG00000000672	rsl1d1	68	50.000	ENSNLEG00000012149	-	68	48.473	Nomascus_leucogenys
ENSCVAG00000000672	rsl1d1	91	42.817	ENSOPRG00000004442	-	73	44.510	Ochotona_princeps
ENSCVAG00000000672	rsl1d1	94	71.429	ENSONIG00000019757	rsl1d1	99	71.714	Oreochromis_niloticus
ENSCVAG00000000672	rsl1d1	66	47.034	ENSOANG00000009408	-	56	47.034	Ornithorhynchus_anatinus
ENSCVAG00000000672	rsl1d1	88	38.310	ENSOCUG00000004751	RSL1D1	58	46.520	Oryctolagus_cuniculus
ENSCVAG00000000672	rsl1d1	99	65.429	ENSORLG00000002877	rsl1d1	99	64.286	Oryzias_latipes
ENSCVAG00000000672	rsl1d1	99	64.571	ENSORLG00020006636	rsl1d1	99	63.429	Oryzias_latipes_hni
ENSCVAG00000000672	rsl1d1	99	64.286	ENSORLG00015005427	rsl1d1	99	63.143	Oryzias_latipes_hsok
ENSCVAG00000000672	rsl1d1	97	65.217	ENSOMEG00000008036	rsl1d1	96	64.286	Oryzias_melastigma
ENSCVAG00000000672	rsl1d1	71	51.190	ENSOGAG00000015151	RSL1D1	52	51.190	Otolemur_garnettii
ENSCVAG00000000672	rsl1d1	68	50.413	ENSOARG00000006923	RSL1D1	53	49.606	Ovis_aries
ENSCVAG00000000672	rsl1d1	83	41.714	ENSPPRG00000005220	RSL1D1	58	47.018	Panthera_pardus
ENSCVAG00000000672	rsl1d1	83	42.308	ENSPTIG00000005526	RSL1D1	56	46.097	Panthera_tigris_altaica
ENSCVAG00000000672	rsl1d1	86	59.223	ENSPKIG00000022687	rsl1d1	82	59.223	Paramormyrops_kingsleyae
ENSCVAG00000000672	rsl1d1	85	49.245	ENSPSIG00000011642	RSL1D1	73	50.151	Pelodiscus_sinensis
ENSCVAG00000000672	rsl1d1	83	70.957	ENSPMGG00000022261	rsl1d1	100	70.957	Periophthalmus_magnuspinnatus
ENSCVAG00000000672	rsl1d1	68	47.521	ENSPEMG00000009523	Rsl1d1	62	45.552	Peromyscus_maniculatus_bairdii
ENSCVAG00000000672	rsl1d1	59	49.761	ENSPMAG00000005446	rsl1d1	53	47.863	Petromyzon_marinus
ENSCVAG00000000672	rsl1d1	96	47.354	ENSPCIG00000026851	-	80	49.216	Phascolarctos_cinereus
ENSCVAG00000000672	rsl1d1	84	64.307	ENSPFOG00000005017	rsl1d1	76	73.022	Poecilia_formosa
ENSCVAG00000000672	rsl1d1	99	64.946	ENSPLAG00000000482	rsl1d1	87	66.116	Poecilia_latipinna
ENSCVAG00000000672	rsl1d1	99	68.539	ENSPMEG00000007032	rsl1d1	96	68.750	Poecilia_mexicana
ENSCVAG00000000672	rsl1d1	95	61.475	ENSPREG00000016619	rsl1d1	95	61.247	Poecilia_reticulata
ENSCVAG00000000672	rsl1d1	71	44.841	ENSPPYG00000019335	-	60	43.704	Pongo_abelii
ENSCVAG00000000672	rsl1d1	95	39.763	ENSPCOG00000022456	RSL1D1	64	46.094	Propithecus_coquereli
ENSCVAG00000000672	rsl1d1	82	42.197	ENSPVAG00000005014	RSL1D1	55	48.134	Pteropus_vampyrus
ENSCVAG00000000672	rsl1d1	95	70.621	ENSPNYG00000002850	rsl1d1	96	70.621	Pundamilia_nyererei
ENSCVAG00000000672	rsl1d1	94	56.863	ENSPNAG00000011848	rsl1d1	87	58.788	Pygocentrus_nattereri
ENSCVAG00000000672	rsl1d1	83	40.708	ENSRNOG00000048608	Rsl1d1l1	51	48.739	Rattus_norvegicus
ENSCVAG00000000672	rsl1d1	83	40.708	ENSRNOG00000061236	LOC108348298	51	48.739	Rattus_norvegicus
ENSCVAG00000000672	rsl1d1	68	46.473	ENSSBOG00000028384	-	54	44.485	Saimiri_boliviensis_boliviensis
ENSCVAG00000000672	rsl1d1	92	53.313	ENSSFOG00015011354	rsl1d1	76	60.377	Scleropages_formosus
ENSCVAG00000000672	rsl1d1	81	71.875	ENSSMAG00000007957	rsl1d1	97	68.895	Scophthalmus_maximus
ENSCVAG00000000672	rsl1d1	99	69.916	ENSSDUG00000008447	rsl1d1	92	70.195	Seriola_dumerili
ENSCVAG00000000672	rsl1d1	99	70.055	ENSSLDG00000008293	rsl1d1	99	71.229	Seriola_lalandi_dorsalis
ENSCVAG00000000672	rsl1d1	83	52.469	ENSSPUG00000007525	RSL1D1	72	50.459	Sphenodon_punctatus
ENSCVAG00000000672	rsl1d1	99	67.109	ENSSPAG00000009755	rsl1d1	99	70.811	Stegastes_partitus
ENSCVAG00000000672	rsl1d1	83	42.647	ENSSSCG00000023984	RSL1D1	54	48.507	Sus_scrofa
ENSCVAG00000000672	rsl1d1	68	60.166	ENSTGUG00000005174	RSL1D1	98	60.166	Taeniopygia_guttata
ENSCVAG00000000672	rsl1d1	99	63.636	ENSTRUG00000016970	rsl1d1	99	63.636	Takifugu_rubripes
ENSCVAG00000000672	rsl1d1	98	62.849	ENSTNIG00000012925	rsl1d1	99	64.023	Tetraodon_nigroviridis
ENSCVAG00000000672	rsl1d1	53	49.733	ENSTBEG00000014678	RSL1D1	50	48.558	Tupaia_belangeri
ENSCVAG00000000672	rsl1d1	68	50.826	ENSTTRG00000011629	RSL1D1	57	46.403	Tursiops_truncatus
ENSCVAG00000000672	rsl1d1	89	41.076	ENSUAMG00000004470	RSL1D1	56	46.154	Ursus_americanus
ENSCVAG00000000672	rsl1d1	57	50.495	ENSUMAG00000003994	RSL1D1	50	46.809	Ursus_maritimus
ENSCVAG00000000672	rsl1d1	84	37.647	ENSVVUG00000024962	-	56	41.516	Vulpes_vulpes
ENSCVAG00000000672	rsl1d1	83	41.429	ENSVVUG00000018170	-	58	46.316	Vulpes_vulpes
ENSCVAG00000000672	rsl1d1	86	50.311	ENSXETG00000033365	-	73	52.174	Xenopus_tropicalis
ENSCVAG00000000672	rsl1d1	66	82.432	ENSXCOG00000003117	rsl1d1	100	82.432	Xiphophorus_couchianus
ENSCVAG00000000672	rsl1d1	69	78.367	ENSXMAG00000025111	rsl1d1	70	78.367	Xiphophorus_maculatus