EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000000686 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3252 bases
Position: chrKL653225.1:76701-79952
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000007687	PARP	PF00644.20	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000002881	-	747	-	ENSCVAP00000007687	248 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000000686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000000686	-	99	74.089	ENSCVAG00000009352	-	74	73.750
ENSCVAG00000000686	-	80	40.887	ENSCVAG00000014329	-	62	40.887
ENSCVAG00000000686	-	79	45.960	ENSCVAG00000017520	-	83	45.960
ENSCVAG00000000686	-	79	33.796	ENSCVAG00000009553	PARP11	65	33.796
ENSCVAG00000000686	-	75	35.938	ENSCVAG00000009699	parp11	67	30.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000686	-	60	55.705	ENSACIG00000008604	-	71	55.705	Amphilophus_citrinellus
ENSCVAG00000000686	-	69	50.857	ENSACIG00000001702	-	78	50.857	Amphilophus_citrinellus
ENSCVAG00000000686	-	99	56.048	ENSAOCG00000020608	-	55	62.871	Amphiprion_ocellaris
ENSCVAG00000000686	-	99	56.855	ENSAPEG00000022069	-	53	56.855	Amphiprion_percula
ENSCVAG00000000686	-	95	51.181	ENSATEG00000012144	-	58	51.181	Anabas_testudineus
ENSCVAG00000000686	-	99	57.769	ENSATEG00000012173	-	59	57.769	Anabas_testudineus
ENSCVAG00000000686	-	99	58.871	ENSACLG00000005627	-	63	58.871	Astatotilapia_calliptera
ENSCVAG00000000686	-	99	60.081	ENSACLG00000005600	-	72	60.081	Astatotilapia_calliptera
ENSCVAG00000000686	-	100	53.012	ENSCSEG00000009834	-	74	53.012	Cynoglossus_semilaevis
ENSCVAG00000000686	-	63	71.975	ENSFHEG00000011780	-	65	71.975	Fundulus_heteroclitus
ENSCVAG00000000686	-	99	72.065	ENSGAFG00000015867	-	90	72.065	Gambusia_affinis
ENSCVAG00000000686	-	79	67.513	ENSHBUG00000013327	-	51	67.513	Haplochromis_burtoni
ENSCVAG00000000686	-	99	58.468	ENSHBUG00000015143	-	66	58.468	Haplochromis_burtoni
ENSCVAG00000000686	-	99	59.200	ENSHBUG00000015159	-	83	59.200	Haplochromis_burtoni
ENSCVAG00000000686	-	85	60.377	ENSIPUG00000019562	-	65	59.906	Ictalurus_punctatus
ENSCVAG00000000686	-	99	66.667	ENSKMAG00000010882	-	57	68.844	Kryptolebias_marmoratus
ENSCVAG00000000686	-	99	60.484	ENSMAMG00000018192	-	65	60.484	Mastacembelus_armatus
ENSCVAG00000000686	-	99	59.919	ENSMAMG00000018261	-	82	59.919	Mastacembelus_armatus
ENSCVAG00000000686	-	99	58.871	ENSMZEG00005027858	-	90	58.871	Maylandia_zebra
ENSCVAG00000000686	-	99	60.729	ENSMZEG00005002038	-	57	60.729	Maylandia_zebra
ENSCVAG00000000686	-	81	59.406	ENSMMOG00000010419	-	57	59.406	Mola_mola
ENSCVAG00000000686	-	99	60.484	ENSMALG00000004165	-	61	60.484	Monopterus_albus
ENSCVAG00000000686	-	99	54.839	ENSNBRG00000003116	-	80	54.839	Neolamprologus_brichardi
ENSCVAG00000000686	-	99	58.871	ENSNBRG00000002998	-	90	58.871	Neolamprologus_brichardi
ENSCVAG00000000686	-	99	59.919	ENSORLG00020014210	-	53	59.919	Oryzias_latipes_hni
ENSCVAG00000000686	-	99	55.870	ENSORLG00020014046	-	95	55.870	Oryzias_latipes_hni
ENSCVAG00000000686	-	99	56.680	ENSORLG00015004157	-	95	56.680	Oryzias_latipes_hsok
ENSCVAG00000000686	-	99	59.109	ENSORLG00015004253	-	81	57.708	Oryzias_latipes_hsok
ENSCVAG00000000686	-	99	59.289	ENSOMEG00000009413	-	90	59.289	Oryzias_melastigma
ENSCVAG00000000686	-	79	39.196	ENSPKIG00000004064	-	53	40.201	Paramormyrops_kingsleyae
ENSCVAG00000000686	-	99	55.242	ENSPMGG00000011629	-	86	55.242	Periophthalmus_magnuspinnatus
ENSCVAG00000000686	-	80	77.889	ENSPLAG00000022742	-	52	77.889	Poecilia_latipinna
ENSCVAG00000000686	-	99	72.470	ENSPMEG00000003192	-	73	72.470	Poecilia_mexicana
ENSCVAG00000000686	-	99	71.660	ENSPREG00000017145	-	90	71.660	Poecilia_reticulata
ENSCVAG00000000686	-	99	61.943	ENSPNYG00000003575	-	73	61.943	Pundamilia_nyererei
ENSCVAG00000000686	-	96	60.924	ENSPNYG00000023890	-	78	60.924	Pundamilia_nyererei
ENSCVAG00000000686	-	99	59.200	ENSPNYG00000008208	-	83	59.200	Pundamilia_nyererei
ENSCVAG00000000686	-	100	45.736	ENSPNAG00000005029	-	90	45.736	Pygocentrus_nattereri
ENSCVAG00000000686	-	100	54.618	ENSPNAG00000004111	-	83	54.618	Pygocentrus_nattereri
ENSCVAG00000000686	-	99	55.020	ENSPNAG00000026750	-	82	55.020	Pygocentrus_nattereri
ENSCVAG00000000686	-	99	61.694	ENSSMAG00000016922	-	51	65.000	Scophthalmus_maximus
ENSCVAG00000000686	-	99	61.134	ENSSLDG00000011620	-	83	61.134	Seriola_lalandi_dorsalis
ENSCVAG00000000686	-	98	57.959	ENSSPAG00000014708	-	75	57.959	Stegastes_partitus
ENSCVAG00000000686	-	99	51.200	ENSTRUG00000010891	-	92	51.200	Takifugu_rubripes
ENSCVAG00000000686	-	99	74.899	ENSXCOG00000012535	-	90	74.899	Xiphophorus_couchianus
ENSCVAG00000000686	-	99	74.899	ENSXMAG00000015158	-	55	80.905	Xiphophorus_maculatus