EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000779 (Gene tree)
Gene ID: 107102714
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 7403 bases
Position: chrKL653801.1:63262-70664
Accession: 107102714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000000422	RNA_pol_Rpb4	PF03874.16	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015099	-	1565	XM_015402120	ENSCVAP00000000422	144 (aa)	XP_015257606	UPI0007425192

Gene Model

Click here to download ENSCVAG00000000779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000779	polr2d	100	90.972	ENSG00000144231	POLR2D	100	94.231	Homo_sapiens
ENSCVAG00000000779	polr2d	100	95.139	ENSAPOG00000023553	polr2d	100	95.139	Acanthochromis_polyacanthus
ENSCVAG00000000779	polr2d	100	89.726	ENSAMEG00000011746	POLR2D	100	89.726	Ailuropoda_melanoleuca
ENSCVAG00000000779	polr2d	100	95.139	ENSAOCG00000007295	polr2d	100	95.139	Amphiprion_ocellaris
ENSCVAG00000000779	polr2d	100	95.139	ENSAPEG00000018714	polr2d	100	95.139	Amphiprion_percula
ENSCVAG00000000779	polr2d	100	96.528	ENSATEG00000020416	polr2d	100	96.528	Anabas_testudineus
ENSCVAG00000000779	polr2d	100	90.278	ENSACAG00000005255	POLR2D	100	90.278	Anolis_carolinensis
ENSCVAG00000000779	polr2d	100	90.972	ENSANAG00000019959	POLR2D	100	90.972	Aotus_nancymaae
ENSCVAG00000000779	polr2d	100	95.139	ENSACLG00000009919	polr2d	100	73.611	Astatotilapia_calliptera
ENSCVAG00000000779	polr2d	92	96.241	ENSAMXG00000008954	polr2d	97	93.007	Astyanax_mexicanus
ENSCVAG00000000779	polr2d	100	90.972	ENSBTAG00000053244	POLR2D	100	90.972	Bos_taurus
ENSCVAG00000000779	polr2d	99	57.241	WBGene00018391	rpb-4	100	57.241	Caenorhabditis_elegans
ENSCVAG00000000779	polr2d	100	90.278	ENSCJAG00000021814	-	100	90.278	Callithrix_jacchus
ENSCVAG00000000779	polr2d	100	90.972	ENSCJAG00000042216	-	100	90.972	Callithrix_jacchus
ENSCVAG00000000779	polr2d	100	90.972	ENSCAFG00000004311	POLR2D	100	90.972	Canis_familiaris
ENSCVAG00000000779	polr2d	100	90.972	ENSCAFG00020003617	POLR2D	100	90.972	Canis_lupus_dingo
ENSCVAG00000000779	polr2d	100	90.278	ENSCHIG00000025995	POLR2D	100	90.278	Capra_hircus
ENSCVAG00000000779	polr2d	81	93.162	ENSTSYG00000036021	POLR2D	100	93.162	Carlito_syrichta
ENSCVAG00000000779	polr2d	100	89.583	ENSCPOG00000002571	POLR2D	100	89.583	Cavia_porcellus
ENSCVAG00000000779	polr2d	100	90.972	ENSCCAG00000037709	POLR2D	100	90.972	Cebus_capucinus
ENSCVAG00000000779	polr2d	100	90.278	ENSCATG00000036749	POLR2D	100	90.278	Cercocebus_atys
ENSCVAG00000000779	polr2d	100	90.278	ENSCLAG00000004449	POLR2D	100	90.278	Chinchilla_lanigera
ENSCVAG00000000779	polr2d	100	90.278	ENSCSAG00000016861	POLR2D	100	90.278	Chlorocebus_sabaeus
ENSCVAG00000000779	polr2d	81	94.017	ENSCHOG00000013850	POLR2D	100	94.017	Choloepus_hoffmanni
ENSCVAG00000000779	polr2d	100	90.278	ENSCPBG00000019132	POLR2D	51	90.278	Chrysemys_picta_bellii
ENSCVAG00000000779	polr2d	92	84.848	ENSCING00000011474	-	99	84.848	Ciona_intestinalis
ENSCVAG00000000779	polr2d	99	79.861	ENSCSAVG00000008353	-	99	79.861	Ciona_savignyi
ENSCVAG00000000779	polr2d	100	90.972	ENSCANG00000043665	POLR2D	100	90.972	Colobus_angolensis_palliatus
ENSCVAG00000000779	polr2d	100	90.972	ENSCGRG00001013608	Polr2d	100	90.972	Cricetulus_griseus_chok1gshd
ENSCVAG00000000779	polr2d	81	94.017	ENSCGRG00000012624	Polr2d	100	94.017	Cricetulus_griseus_crigri
ENSCVAG00000000779	polr2d	100	94.444	ENSCSEG00000006147	polr2d	100	94.444	Cynoglossus_semilaevis
ENSCVAG00000000779	polr2d	100	92.361	ENSDARG00000076509	polr2d	100	92.361	Danio_rerio
ENSCVAG00000000779	polr2d	100	90.278	ENSDNOG00000008527	POLR2D	100	90.278	Dasypus_novemcinctus
ENSCVAG00000000779	polr2d	100	90.278	ENSDORG00000026897	Polr2d	100	90.278	Dipodomys_ordii
ENSCVAG00000000779	polr2d	90	78.462	FBgn0263757	Rpb4	94	78.462	Drosophila_melanogaster
ENSCVAG00000000779	polr2d	100	88.889	ENSEBUG00000007675	polr2d	100	88.889	Eptatretus_burgeri
ENSCVAG00000000779	polr2d	100	90.972	ENSEASG00005007103	POLR2D	100	90.972	Equus_asinus_asinus
ENSCVAG00000000779	polr2d	100	90.972	ENSECAG00000000556	POLR2D	100	90.972	Equus_caballus
ENSCVAG00000000779	polr2d	100	93.056	ENSELUG00000005928	polr2d	100	93.056	Esox_lucius
ENSCVAG00000000779	polr2d	100	90.972	ENSFCAG00000027816	POLR2D	100	90.972	Felis_catus
ENSCVAG00000000779	polr2d	100	90.972	ENSFALG00000003528	POLR2D	100	90.972	Ficedula_albicollis
ENSCVAG00000000779	polr2d	100	89.583	ENSFDAG00000007217	POLR2D	100	89.583	Fukomys_damarensis
ENSCVAG00000000779	polr2d	100	92.361	ENSGMOG00000001823	polr2d	99	92.361	Gadus_morhua
ENSCVAG00000000779	polr2d	100	90.972	ENSGALG00000002057	POLR2D	100	90.972	Gallus_gallus
ENSCVAG00000000779	polr2d	100	99.306	ENSGAFG00000016932	polr2d	71	99.306	Gambusia_affinis
ENSCVAG00000000779	polr2d	100	93.056	ENSGACG00000004639	polr2d	100	93.056	Gasterosteus_aculeatus
ENSCVAG00000000779	polr2d	100	90.972	ENSGAGG00000021308	POLR2D	100	90.972	Gopherus_agassizii
ENSCVAG00000000779	polr2d	100	90.972	ENSGGOG00000004723	POLR2D	100	90.972	Gorilla_gorilla
ENSCVAG00000000779	polr2d	100	90.278	ENSHGLG00000016570	Polr2d	100	90.278	Heterocephalus_glaber_female
ENSCVAG00000000779	polr2d	100	90.278	ENSHGLG00100013785	Polr2d	100	90.278	Heterocephalus_glaber_male
ENSCVAG00000000779	polr2d	100	91.667	ENSHCOG00000006425	polr2d	100	91.667	Hippocampus_comes
ENSCVAG00000000779	polr2d	100	90.972	ENSIPUG00000011192	polr2d	100	90.972	Ictalurus_punctatus
ENSCVAG00000000779	polr2d	100	88.889	ENSSTOG00000023329	POLR2D	100	88.889	Ictidomys_tridecemlineatus
ENSCVAG00000000779	polr2d	100	90.278	ENSJJAG00000015053	-	100	90.278	Jaculus_jaculus
ENSCVAG00000000779	polr2d	81	88.889	ENSJJAG00000005723	-	94	88.889	Jaculus_jaculus
ENSCVAG00000000779	polr2d	100	82.639	ENSJJAG00000000783	-	100	82.639	Jaculus_jaculus
ENSCVAG00000000779	polr2d	85	95.082	ENSKMAG00000010677	polr2d	68	95.082	Kryptolebias_marmoratus
ENSCVAG00000000779	polr2d	100	92.361	ENSLACG00000017253	POLR2D	100	92.361	Latimeria_chalumnae
ENSCVAG00000000779	polr2d	100	94.444	ENSLOCG00000009106	polr2d	100	94.444	Lepisosteus_oculatus
ENSCVAG00000000779	polr2d	100	90.278	ENSLAFG00000001848	POLR2D	100	90.278	Loxodonta_africana
ENSCVAG00000000779	polr2d	100	90.278	ENSMFAG00000031937	POLR2D	100	90.278	Macaca_fascicularis
ENSCVAG00000000779	polr2d	100	90.278	ENSMMUG00000001989	POLR2D	100	90.278	Macaca_mulatta
ENSCVAG00000000779	polr2d	100	90.278	ENSMNEG00000035505	POLR2D	100	90.278	Macaca_nemestrina
ENSCVAG00000000779	polr2d	100	90.278	ENSMLEG00000035827	POLR2D	100	90.278	Mandrillus_leucophaeus
ENSCVAG00000000779	polr2d	100	90.972	ENSMGAG00000001248	POLR2D	100	90.972	Meleagris_gallopavo
ENSCVAG00000000779	polr2d	100	90.278	ENSMAUG00000014518	Polr2d	100	90.278	Mesocricetus_auratus
ENSCVAG00000000779	polr2d	100	90.278	ENSMICG00000009931	POLR2D	100	90.278	Microcebus_murinus
ENSCVAG00000000779	polr2d	100	88.194	ENSMOCG00000019367	Polr2d	100	88.194	Microtus_ochrogaster
ENSCVAG00000000779	polr2d	100	91.667	ENSMODG00000018653	-	100	91.667	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	76.389	ENSMODG00000025028	-	100	76.389	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	75.694	ENSMODG00000025029	-	100	75.694	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	76.389	ENSMODG00000025026	-	100	76.389	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	76.389	ENSMODG00000025033	-	100	76.389	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	75.000	ENSMODG00000025032	-	100	75.000	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	76.389	ENSMODG00000025031	-	100	76.389	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	76.389	ENSMODG00000025030	-	100	76.389	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	76.389	ENSMODG00000025036	-	100	76.389	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	75.694	ENSMODG00000025035	-	100	75.694	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	75.694	ENSMODG00000025034	-	100	75.694	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	76.389	ENSMODG00000025027	-	100	76.389	Monodelphis_domestica
ENSCVAG00000000779	polr2d	100	95.139	ENSMALG00000018266	polr2d	100	95.139	Monopterus_albus
ENSCVAG00000000779	polr2d	100	90.972	MGP_CAROLIEiJ_G0022066	Polr2d	100	90.972	Mus_caroli
ENSCVAG00000000779	polr2d	100	90.972	ENSMUSG00000024258	Polr2d	100	90.972	Mus_musculus
ENSCVAG00000000779	polr2d	100	90.972	MGP_PahariEiJ_G0018800	Polr2d	100	90.972	Mus_pahari
ENSCVAG00000000779	polr2d	100	90.972	MGP_SPRETEiJ_G0022977	Polr2d	100	90.972	Mus_spretus
ENSCVAG00000000779	polr2d	100	90.972	ENSMPUG00000016685	POLR2D	100	90.972	Mustela_putorius_furo
ENSCVAG00000000779	polr2d	82	94.068	ENSMLUG00000006862	POLR2D	100	94.068	Myotis_lucifugus
ENSCVAG00000000779	polr2d	100	90.972	ENSNGAG00000014862	Polr2d	100	90.972	Nannospalax_galili
ENSCVAG00000000779	polr2d	100	90.972	ENSNLEG00000027191	POLR2D	100	90.972	Nomascus_leucogenys
ENSCVAG00000000779	polr2d	81	93.162	ENSOPRG00000005327	POLR2D	100	93.162	Ochotona_princeps
ENSCVAG00000000779	polr2d	100	90.278	ENSODEG00000005262	POLR2D	100	90.278	Octodon_degus
ENSCVAG00000000779	polr2d	100	95.833	ENSONIG00000017290	polr2d	100	95.833	Oreochromis_niloticus
ENSCVAG00000000779	polr2d	82	94.915	ENSOANG00000013216	POLR2D	100	94.915	Ornithorhynchus_anatinus
ENSCVAG00000000779	polr2d	100	88.889	ENSOCUG00000023403	-	100	88.889	Oryctolagus_cuniculus
ENSCVAG00000000779	polr2d	100	84.828	ENSOCUG00000021449	-	100	84.828	Oryctolagus_cuniculus
ENSCVAG00000000779	polr2d	100	93.750	ENSORLG00000005266	polr2d	100	93.750	Oryzias_latipes
ENSCVAG00000000779	polr2d	100	94.444	ENSORLG00020006647	polr2d	100	94.444	Oryzias_latipes_hni
ENSCVAG00000000779	polr2d	100	93.750	ENSORLG00015003222	polr2d	100	93.750	Oryzias_latipes_hsok
ENSCVAG00000000779	polr2d	100	93.750	ENSOMEG00000018915	polr2d	100	93.750	Oryzias_melastigma
ENSCVAG00000000779	polr2d	100	89.041	ENSOGAG00000017118	POLR2D	100	89.041	Otolemur_garnettii
ENSCVAG00000000779	polr2d	100	90.278	ENSOARG00000015995	POLR2D	100	90.278	Ovis_aries
ENSCVAG00000000779	polr2d	100	90.972	ENSPPRG00000020222	POLR2D	100	90.972	Panthera_pardus
ENSCVAG00000000779	polr2d	100	90.972	ENSPTIG00000018618	POLR2D	100	90.972	Panthera_tigris_altaica
ENSCVAG00000000779	polr2d	100	90.972	ENSPTRG00000012436	POLR2D	100	90.972	Pan_troglodytes
ENSCVAG00000000779	polr2d	100	90.278	ENSPANG00000018602	POLR2D	100	90.278	Papio_anubis
ENSCVAG00000000779	polr2d	100	93.750	ENSPKIG00000012166	polr2d	100	93.750	Paramormyrops_kingsleyae
ENSCVAG00000000779	polr2d	82	94.915	ENSPSIG00000002873	POLR2D	100	94.915	Pelodiscus_sinensis
ENSCVAG00000000779	polr2d	100	90.972	ENSPEMG00000018244	Polr2d	100	90.972	Peromyscus_maniculatus_bairdii
ENSCVAG00000000779	polr2d	100	86.111	ENSPMAG00000005021	polr2d	99	86.111	Petromyzon_marinus
ENSCVAG00000000779	polr2d	100	99.306	ENSPFOG00000008969	polr2d	100	99.306	Poecilia_formosa
ENSCVAG00000000779	polr2d	100	99.306	ENSPLAG00000017210	polr2d	100	99.306	Poecilia_latipinna
ENSCVAG00000000779	polr2d	100	99.306	ENSPMEG00000005160	polr2d	100	99.306	Poecilia_mexicana
ENSCVAG00000000779	polr2d	72	99.038	ENSPREG00000021862	polr2d	100	99.038	Poecilia_reticulata
ENSCVAG00000000779	polr2d	100	90.972	ENSPPYG00000012759	POLR2D	100	90.972	Pongo_abelii
ENSCVAG00000000779	polr2d	100	90.278	ENSPCAG00000001396	POLR2D	100	90.278	Procavia_capensis
ENSCVAG00000000779	polr2d	100	90.278	ENSPCOG00000022076	POLR2D	100	90.278	Propithecus_coquereli
ENSCVAG00000000779	polr2d	100	90.278	ENSPVAG00000004002	POLR2D	100	90.278	Pteropus_vampyrus
ENSCVAG00000000779	polr2d	99	93.662	ENSPNAG00000018246	polr2d	99	93.662	Pygocentrus_nattereri
ENSCVAG00000000779	polr2d	100	90.972	ENSRNOG00000016231	Polr2d	100	90.972	Rattus_norvegicus
ENSCVAG00000000779	polr2d	100	90.972	ENSRBIG00000039326	POLR2D	100	90.972	Rhinopithecus_bieti
ENSCVAG00000000779	polr2d	100	90.972	ENSRROG00000023289	POLR2D	100	90.972	Rhinopithecus_roxellana
ENSCVAG00000000779	polr2d	100	90.972	ENSSHAG00000014817	-	100	90.972	Sarcophilus_harrisii
ENSCVAG00000000779	polr2d	91	97.710	ENSSFOG00015024204	polr2d	100	93.056	Scleropages_formosus
ENSCVAG00000000779	polr2d	100	95.139	ENSSDUG00000006060	polr2d	100	95.139	Seriola_dumerili
ENSCVAG00000000779	polr2d	94	97.059	ENSSLDG00000024485	polr2d	99	94.406	Seriola_lalandi_dorsalis
ENSCVAG00000000779	polr2d	81	93.162	ENSSARG00000009037	POLR2D	100	93.162	Sorex_araneus
ENSCVAG00000000779	polr2d	100	90.972	ENSSPUG00000014915	POLR2D	100	90.972	Sphenodon_punctatus
ENSCVAG00000000779	polr2d	100	95.139	ENSSPAG00000013386	polr2d	100	95.139	Stegastes_partitus
ENSCVAG00000000779	polr2d	100	90.972	ENSSSCG00000039230	POLR2D	100	90.972	Sus_scrofa
ENSCVAG00000000779	polr2d	100	90.972	ENSTGUG00000005773	POLR2D	99	90.972	Taeniopygia_guttata
ENSCVAG00000000779	polr2d	100	93.750	ENSTRUG00000004740	polr2d	100	93.750	Takifugu_rubripes
ENSCVAG00000000779	polr2d	100	95.139	ENSTNIG00000011210	polr2d	100	95.139	Tetraodon_nigroviridis
ENSCVAG00000000779	polr2d	81	94.017	ENSTBEG00000006081	POLR2D	100	94.017	Tupaia_belangeri
ENSCVAG00000000779	polr2d	81	94.017	ENSTTRG00000010055	POLR2D	100	94.017	Tursiops_truncatus
ENSCVAG00000000779	polr2d	90	93.077	ENSUAMG00000024374	POLR2D	98	93.077	Ursus_americanus
ENSCVAG00000000779	polr2d	83	93.333	ENSUMAG00000008280	POLR2D	100	94.231	Ursus_maritimus
ENSCVAG00000000779	polr2d	81	94.017	ENSVPAG00000007239	POLR2D	100	94.017	Vicugna_pacos
ENSCVAG00000000779	polr2d	100	90.972	ENSVVUG00000008616	POLR2D	100	90.972	Vulpes_vulpes
ENSCVAG00000000779	polr2d	100	87.500	ENSXETG00000002955	polr2d	100	87.500	Xenopus_tropicalis
ENSCVAG00000000779	polr2d	72	99.038	ENSXCOG00000012668	polr2d	100	99.038	Xiphophorus_couchianus
ENSCVAG00000000779	polr2d	72	99.038	ENSXMAG00000014031	polr2d	100	99.038	Xiphophorus_maculatus