EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000827 (Gene tree)
Gene ID: 107088517
Gene Symbol: gpatch3
Alias: zgc:158863
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5472 bases
Position: chrKL652721.1:354482-359953
Accession: 107088517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017080	G-patch	PF01585.23	5.8e-10	1	1
ENSCVAP00000031109	G-patch	PF01585.23	6.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000025641	-	2051	XM_015380742	ENSCVAP00000017080	516 (aa)	XP_015236228	UPI00074256B0
ENSCVAT00000025649	-	2129	-	ENSCVAP00000031109	542 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000000827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000827	gpatch3	97	53.565	ENSG00000198746	GPATCH3	82	72.581	Homo_sapiens
ENSCVAG00000000827	gpatch3	100	76.834	ENSAPOG00000001212	gpatch3	100	78.185	Acanthochromis_polyacanthus
ENSCVAG00000000827	gpatch3	97	55.469	ENSAMEG00000010801	GPATCH3	95	55.469	Ailuropoda_melanoleuca
ENSCVAG00000000827	gpatch3	100	79.769	ENSAOCG00000019352	gpatch3	100	80.154	Amphiprion_ocellaris
ENSCVAG00000000827	gpatch3	100	79.961	ENSAPEG00000018926	gpatch3	100	80.347	Amphiprion_percula
ENSCVAG00000000827	gpatch3	100	77.413	ENSATEG00000023759	gpatch3	99	77.413	Anabas_testudineus
ENSCVAG00000000827	gpatch3	68	66.011	ENSAPLG00000010745	GPATCH3	100	66.011	Anas_platyrhynchos
ENSCVAG00000000827	gpatch3	96	52.510	ENSACAG00000016709	GPATCH3	94	52.703	Anolis_carolinensis
ENSCVAG00000000827	gpatch3	97	54.231	ENSANAG00000035944	GPATCH3	97	55.598	Aotus_nancymaae
ENSCVAG00000000827	gpatch3	100	78.295	ENSACLG00000012807	gpatch3	99	78.295	Astatotilapia_calliptera
ENSCVAG00000000827	gpatch3	99	60.777	ENSAMXG00000034582	gpatch3	99	60.000	Astyanax_mexicanus
ENSCVAG00000000827	gpatch3	97	56.055	ENSBTAG00000014849	GPATCH3	96	56.250	Bos_taurus
ENSCVAG00000000827	gpatch3	96	36.704	WBGene00019467	K07B1.7	93	35.206	Caenorhabditis_elegans
ENSCVAG00000000827	gpatch3	97	53.846	ENSCJAG00000010000	GPATCH3	95	55.319	Callithrix_jacchus
ENSCVAG00000000827	gpatch3	97	55.469	ENSCAFG00000012265	GPATCH3	95	55.078	Canis_familiaris
ENSCVAG00000000827	gpatch3	97	55.469	ENSCAFG00020021640	GPATCH3	95	55.078	Canis_lupus_dingo
ENSCVAG00000000827	gpatch3	97	55.577	ENSCHIG00000024245	GPATCH3	94	55.769	Capra_hircus
ENSCVAG00000000827	gpatch3	97	53.565	ENSTSYG00000011753	GPATCH3	95	52.794	Carlito_syrichta
ENSCVAG00000000827	gpatch3	63	56.364	ENSCAPG00000007313	GPATCH3	94	57.576	Cavia_aperea
ENSCVAG00000000827	gpatch3	97	55.426	ENSCPOG00000010404	GPATCH3	95	55.426	Cavia_porcellus
ENSCVAG00000000827	gpatch3	97	55.598	ENSCCAG00000030482	GPATCH3	97	55.405	Cebus_capucinus
ENSCVAG00000000827	gpatch3	97	52.023	ENSCATG00000033598	GPATCH3	95	53.385	Cercocebus_atys
ENSCVAG00000000827	gpatch3	96	57.708	ENSCLAG00000012064	GPATCH3	95	56.783	Chinchilla_lanigera
ENSCVAG00000000827	gpatch3	96	57.545	ENSCPBG00000024968	GPATCH3	93	57.545	Chrysemys_picta_bellii
ENSCVAG00000000827	gpatch3	97	53.065	ENSCANG00000036795	GPATCH3	95	54.423	Colobus_angolensis_palliatus
ENSCVAG00000000827	gpatch3	97	56.805	ENSCGRG00001002930	Gpatch3	95	57.199	Cricetulus_griseus_chok1gshd
ENSCVAG00000000827	gpatch3	97	56.805	ENSCGRG00000004699	Gpatch3	95	57.199	Cricetulus_griseus_crigri
ENSCVAG00000000827	gpatch3	100	70.881	ENSCSEG00000005277	gpatch3	100	71.264	Cynoglossus_semilaevis
ENSCVAG00000000827	gpatch3	93	79.245	ENSDARG00000052747	gpatch3	74	79.245	Danio_rerio
ENSCVAG00000000827	gpatch3	97	55.192	ENSDNOG00000016999	GPATCH3	95	55.747	Dasypus_novemcinctus
ENSCVAG00000000827	gpatch3	96	45.243	ENSEBUG00000013911	gpatch3	91	45.243	Eptatretus_burgeri
ENSCVAG00000000827	gpatch3	97	56.055	ENSEASG00005008636	GPATCH3	95	55.664	Equus_asinus_asinus
ENSCVAG00000000827	gpatch3	97	56.250	ENSECAG00000007653	GPATCH3	95	55.859	Equus_caballus
ENSCVAG00000000827	gpatch3	99	66.148	ENSELUG00000000963	gpatch3	99	66.148	Esox_lucius
ENSCVAG00000000827	gpatch3	98	55.086	ENSFCAG00000012819	GPATCH3	96	54.702	Felis_catus
ENSCVAG00000000827	gpatch3	66	62.139	ENSFALG00000000319	GPATCH3	91	61.960	Ficedula_albicollis
ENSCVAG00000000827	gpatch3	97	55.146	ENSFDAG00000016270	GPATCH3	95	53.786	Fukomys_damarensis
ENSCVAG00000000827	gpatch3	100	81.467	ENSFHEG00000015264	gpatch3	100	81.467	Fundulus_heteroclitus
ENSCVAG00000000827	gpatch3	100	65.465	ENSGMOG00000000991	gpatch3	100	65.209	Gadus_morhua
ENSCVAG00000000827	gpatch3	96	56.713	ENSGALG00000000881	GPATCH3	92	56.914	Gallus_gallus
ENSCVAG00000000827	gpatch3	98	86.024	ENSGAFG00000002531	gpatch3	99	86.024	Gambusia_affinis
ENSCVAG00000000827	gpatch3	100	75.869	ENSGACG00000007199	gpatch3	100	75.869	Gasterosteus_aculeatus
ENSCVAG00000000827	gpatch3	96	57.545	ENSGAGG00000023286	GPATCH3	93	57.545	Gopherus_agassizii
ENSCVAG00000000827	gpatch3	97	53.372	ENSGGOG00000015305	GPATCH3	95	54.739	Gorilla_gorilla
ENSCVAG00000000827	gpatch3	100	77.907	ENSHBUG00000020513	gpatch3	98	82.961	Haplochromis_burtoni
ENSCVAG00000000827	gpatch3	97	53.167	ENSHGLG00000012492	GPATCH3	97	54.476	Heterocephalus_glaber_female
ENSCVAG00000000827	gpatch3	97	53.167	ENSHGLG00100016909	GPATCH3	97	54.476	Heterocephalus_glaber_male
ENSCVAG00000000827	gpatch3	98	74.269	ENSHCOG00000005739	gpatch3	99	74.269	Hippocampus_comes
ENSCVAG00000000827	gpatch3	97	64.786	ENSIPUG00000007697	gpatch3	99	71.865	Ictalurus_punctatus
ENSCVAG00000000827	gpatch3	97	56.084	ENSSTOG00000015220	GPATCH3	95	56.084	Ictidomys_tridecemlineatus
ENSCVAG00000000827	gpatch3	96	56.947	ENSJJAG00000003292	Gpatch3	94	56.556	Jaculus_jaculus
ENSCVAG00000000827	gpatch3	100	81.107	ENSKMAG00000020717	gpatch3	100	81.298	Kryptolebias_marmoratus
ENSCVAG00000000827	gpatch3	99	73.896	ENSLBEG00000007046	gpatch3	99	73.896	Labrus_bergylta
ENSCVAG00000000827	gpatch3	93	71.818	ENSLACG00000011400	GPATCH3	79	71.875	Latimeria_chalumnae
ENSCVAG00000000827	gpatch3	100	63.258	ENSLOCG00000003858	gpatch3	100	63.258	Lepisosteus_oculatus
ENSCVAG00000000827	gpatch3	97	54.231	ENSLAFG00000016691	GPATCH3	96	54.423	Loxodonta_africana
ENSCVAG00000000827	gpatch3	97	53.565	ENSMFAG00000030918	GPATCH3	95	54.932	Macaca_fascicularis
ENSCVAG00000000827	gpatch3	97	55.126	ENSMMUG00000018723	GPATCH3	95	54.932	Macaca_mulatta
ENSCVAG00000000827	gpatch3	88	47.323	ENSMNEG00000033889	GPATCH3	93	46.567	Macaca_nemestrina
ENSCVAG00000000827	gpatch3	97	53.757	ENSMLEG00000033364	GPATCH3	95	55.126	Mandrillus_leucophaeus
ENSCVAG00000000827	gpatch3	100	78.876	ENSMAMG00000023975	gpatch3	100	78.876	Mastacembelus_armatus
ENSCVAG00000000827	gpatch3	100	78.295	ENSMZEG00005019731	gpatch3	99	78.295	Maylandia_zebra
ENSCVAG00000000827	gpatch3	67	63.610	ENSMGAG00000000813	GPATCH3	92	64.183	Meleagris_gallopavo
ENSCVAG00000000827	gpatch3	96	55.447	ENSMAUG00000002005	Gpatch3	94	55.992	Mesocricetus_auratus
ENSCVAG00000000827	gpatch3	97	55.000	ENSMICG00000015656	GPATCH3	95	54.615	Microcebus_murinus
ENSCVAG00000000827	gpatch3	96	55.882	ENSMOCG00000022375	Gpatch3	94	56.275	Microtus_ochrogaster
ENSCVAG00000000827	gpatch3	68	80.000	ENSMMOG00000008963	gpatch3	96	79.772	Mola_mola
ENSCVAG00000000827	gpatch3	97	54.669	ENSMODG00000014417	GPATCH3	94	52.703	Monodelphis_domestica
ENSCVAG00000000827	gpatch3	100	77.220	ENSMALG00000007586	gpatch3	100	77.220	Monopterus_albus
ENSCVAG00000000827	gpatch3	96	57.031	MGP_CAROLIEiJ_G0026594	Gpatch3	94	56.445	Mus_caroli
ENSCVAG00000000827	gpatch3	96	57.031	ENSMUSG00000028850	Gpatch3	94	56.641	Mus_musculus
ENSCVAG00000000827	gpatch3	96	55.976	MGP_PahariEiJ_G0028927	Gpatch3	94	57.371	Mus_pahari
ENSCVAG00000000827	gpatch3	96	57.031	MGP_SPRETEiJ_G0027575	Gpatch3	99	60.458	Mus_spretus
ENSCVAG00000000827	gpatch3	97	54.102	ENSMPUG00000015665	GPATCH3	95	55.664	Mustela_putorius_furo
ENSCVAG00000000827	gpatch3	97	55.490	ENSMLUG00000023528	GPATCH3	95	55.882	Myotis_lucifugus
ENSCVAG00000000827	gpatch3	97	54.721	ENSNGAG00000006821	Gpatch3	95	54.651	Nannospalax_galili
ENSCVAG00000000827	gpatch3	100	70.543	ENSNBRG00000000365	gpatch3	99	69.574	Neolamprologus_brichardi
ENSCVAG00000000827	gpatch3	91	53.942	ENSNLEG00000009387	GPATCH3	92	53.112	Nomascus_leucogenys
ENSCVAG00000000827	gpatch3	96	56.693	ENSMEUG00000003236	GPATCH3	93	54.795	Notamacropus_eugenii
ENSCVAG00000000827	gpatch3	97	56.078	ENSOPRG00000016429	GPATCH3	95	56.055	Ochotona_princeps
ENSCVAG00000000827	gpatch3	97	56.505	ENSODEG00000003292	GPATCH3	95	55.922	Octodon_degus
ENSCVAG00000000827	gpatch3	100	79.070	ENSONIG00000006771	gpatch3	99	79.070	Oreochromis_niloticus
ENSCVAG00000000827	gpatch3	87	56.550	ENSOCUG00000006411	GPATCH3	95	54.292	Oryctolagus_cuniculus
ENSCVAG00000000827	gpatch3	100	72.467	ENSORLG00000004435	gpatch3	100	73.614	Oryzias_latipes
ENSCVAG00000000827	gpatch3	100	73.143	ENSORLG00020022609	gpatch3	100	73.333	Oryzias_latipes_hni
ENSCVAG00000000827	gpatch3	100	74.521	ENSORLG00015008692	gpatch3	100	74.521	Oryzias_latipes_hsok
ENSCVAG00000000827	gpatch3	100	74.468	ENSOMEG00000010991	gpatch3	100	74.855	Oryzias_melastigma
ENSCVAG00000000827	gpatch3	97	55.106	ENSOGAG00000011647	GPATCH3	96	54.721	Otolemur_garnettii
ENSCVAG00000000827	gpatch3	97	55.664	ENSOARG00000003955	GPATCH3	93	55.385	Ovis_aries
ENSCVAG00000000827	gpatch3	97	53.372	ENSPPAG00000032902	GPATCH3	95	54.159	Pan_paniscus
ENSCVAG00000000827	gpatch3	98	55.278	ENSPPRG00000024244	GPATCH3	96	54.894	Panthera_pardus
ENSCVAG00000000827	gpatch3	98	55.114	ENSPTIG00000014693	GPATCH3	96	54.735	Panthera_tigris_altaica
ENSCVAG00000000827	gpatch3	97	53.565	ENSPTRG00000023419	GPATCH3	95	54.352	Pan_troglodytes
ENSCVAG00000000827	gpatch3	97	53.565	ENSPANG00000007984	GPATCH3	95	55.039	Papio_anubis
ENSCVAG00000000827	gpatch3	99	66.992	ENSPKIG00000020073	gpatch3	97	66.992	Paramormyrops_kingsleyae
ENSCVAG00000000827	gpatch3	77	60.247	ENSPSIG00000017160	GPATCH3	95	61.235	Pelodiscus_sinensis
ENSCVAG00000000827	gpatch3	100	73.359	ENSPMGG00000001703	gpatch3	100	73.745	Periophthalmus_magnuspinnatus
ENSCVAG00000000827	gpatch3	97	54.932	ENSPEMG00000020632	Gpatch3	95	56.286	Peromyscus_maniculatus_bairdii
ENSCVAG00000000827	gpatch3	97	54.894	ENSPCIG00000012681	GPATCH3	94	56.641	Phascolarctos_cinereus
ENSCVAG00000000827	gpatch3	100	85.521	ENSPFOG00000009928	gpatch3	100	85.907	Poecilia_formosa
ENSCVAG00000000827	gpatch3	100	85.521	ENSPLAG00000023784	gpatch3	100	86.100	Poecilia_latipinna
ENSCVAG00000000827	gpatch3	100	85.328	ENSPMEG00000010268	gpatch3	100	85.907	Poecilia_mexicana
ENSCVAG00000000827	gpatch3	99	82.136	ENSPREG00000008873	gpatch3	99	81.359	Poecilia_reticulata
ENSCVAG00000000827	gpatch3	97	53.950	ENSPPYG00000001675	GPATCH3	95	55.126	Pongo_abelii
ENSCVAG00000000827	gpatch3	97	53.488	ENSPCAG00000008286	GPATCH3	95	54.070	Procavia_capensis
ENSCVAG00000000827	gpatch3	97	54.913	ENSPCOG00000020145	GPATCH3	95	54.528	Propithecus_coquereli
ENSCVAG00000000827	gpatch3	97	51.468	ENSPVAG00000017282	GPATCH3	95	51.468	Pteropus_vampyrus
ENSCVAG00000000827	gpatch3	98	77.909	ENSPNYG00000005172	gpatch3	100	77.909	Pundamilia_nyererei
ENSCVAG00000000827	gpatch3	99	63.238	ENSPNAG00000018501	gpatch3	99	63.238	Pygocentrus_nattereri
ENSCVAG00000000827	gpatch3	96	56.693	ENSRNOG00000007097	Gpatch3	94	54.651	Rattus_norvegicus
ENSCVAG00000000827	gpatch3	97	55.577	ENSRBIG00000005853	GPATCH3	95	54.808	Rhinopithecus_bieti
ENSCVAG00000000827	gpatch3	97	53.448	ENSRROG00000038382	GPATCH3	95	54.808	Rhinopithecus_roxellana
ENSCVAG00000000827	gpatch3	97	54.545	ENSSBOG00000019680	GPATCH3	94	62.571	Saimiri_boliviensis_boliviensis
ENSCVAG00000000827	gpatch3	97	55.106	ENSSHAG00000014268	GPATCH3	95	56.513	Sarcophilus_harrisii
ENSCVAG00000000827	gpatch3	100	65.283	ENSSFOG00015009602	gpatch3	100	64.340	Scleropages_formosus
ENSCVAG00000000827	gpatch3	100	74.809	ENSSMAG00000002067	gpatch3	100	74.809	Scophthalmus_maximus
ENSCVAG00000000827	gpatch3	100	78.295	ENSSDUG00000017071	gpatch3	100	78.295	Seriola_dumerili
ENSCVAG00000000827	gpatch3	100	78.682	ENSSLDG00000016549	gpatch3	100	78.682	Seriola_lalandi_dorsalis
ENSCVAG00000000827	gpatch3	96	55.936	ENSSPUG00000018299	GPATCH3	94	56.740	Sphenodon_punctatus
ENSCVAG00000000827	gpatch3	100	79.191	ENSSPAG00000013046	gpatch3	100	79.383	Stegastes_partitus
ENSCVAG00000000827	gpatch3	97	56.420	ENSSSCG00000003564	GPATCH3	93	55.837	Sus_scrofa
ENSCVAG00000000827	gpatch3	78	57.353	ENSTGUG00000000986	GPATCH3	98	58.333	Taeniopygia_guttata
ENSCVAG00000000827	gpatch3	100	72.486	ENSTRUG00000013294	gpatch3	100	72.486	Takifugu_rubripes
ENSCVAG00000000827	gpatch3	98	71.795	ENSTNIG00000009657	gpatch3	99	71.795	Tetraodon_nigroviridis
ENSCVAG00000000827	gpatch3	77	61.688	ENSTBEG00000002042	GPATCH3	84	61.688	Tupaia_belangeri
ENSCVAG00000000827	gpatch3	96	51.786	ENSTTRG00000016677	GPATCH3	84	67.606	Tursiops_truncatus
ENSCVAG00000000827	gpatch3	97	54.102	ENSUAMG00000026235	GPATCH3	95	53.320	Ursus_americanus
ENSCVAG00000000827	gpatch3	97	54.297	ENSUMAG00000011894	GPATCH3	95	53.516	Ursus_maritimus
ENSCVAG00000000827	gpatch3	97	54.492	ENSVVUG00000012041	GPATCH3	95	55.664	Vulpes_vulpes
ENSCVAG00000000827	gpatch3	96	51.800	ENSXETG00000030345	GPATCH3	98	51.292	Xenopus_tropicalis
ENSCVAG00000000827	gpatch3	100	73.837	ENSXCOG00000016129	gpatch3	100	72.674	Xiphophorus_couchianus
ENSCVAG00000000827	gpatch3	100	84.526	ENSXMAG00000010749	gpatch3	100	84.526	Xiphophorus_maculatus