EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000000830 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 54675 bases
Position: chrKL652846.1:740387-795061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024295	zf-C2H2	PF00096.26	3e-17	1	2
ENSCVAP00000024295	zf-C2H2	PF00096.26	3e-17	2	2
ENSCVAP00000024295	zf-met	PF12874.7	2.5e-07	1	2
ENSCVAP00000024295	zf-met	PF12874.7	2.5e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000004548	-	1578	-	ENSCVAP00000024295	525 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000000830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000830's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000000830	-	87	30.216	ENSCVAG00000014404	-	94	30.216
ENSCVAG00000000830	-	86	30.545	ENSCVAG00000019097	-	67	30.545
ENSCVAG00000000830	-	85	41.270	ENSCVAG00000007051	-	99	41.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000830	-	84	30.000	ENSEBUG00000004841	-	81	30.000	Eptatretus_burgeri