EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000000925 (Gene tree)
Gene ID: 107098780
Gene Symbol: SCAF8
Alias: KIAA1116|RBM16
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14920 bases
Position: chrKL652527.1:1378436-1393355
Accession: 107098780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000024814	RRM_1	PF00076.22	6.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000003237	SCAF8-201	8513	XM_015396627	ENSCVAP00000024814	1321 (aa)	XP_015252113	-

Gene Model

Click here to download ENSCVAG00000000925's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000925's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000925	SCAF8	77	66.579	ENSG00000213079	SCAF8	82	67.104	Homo_sapiens
ENSCVAG00000000925	SCAF8	99	78.168	ENSAPOG00000015527	SCAF8	97	78.095	Acanthochromis_polyacanthus
ENSCVAG00000000925	SCAF8	77	66.972	ENSAMEG00000007583	SCAF8	78	67.497	Ailuropoda_melanoleuca
ENSCVAG00000000925	SCAF8	99	77.137	ENSAOCG00000002421	SCAF8	97	77.137	Amphiprion_ocellaris
ENSCVAG00000000925	SCAF8	99	69.401	ENSAPEG00000020115	SCAF8	68	64.561	Amphiprion_percula
ENSCVAG00000000925	SCAF8	77	79.903	ENSATEG00000006959	SCAF8	91	80.098	Anabas_testudineus
ENSCVAG00000000925	SCAF8	77	75.428	ENSAPLG00000005765	SCAF8	83	65.355	Anas_platyrhynchos
ENSCVAG00000000925	SCAF8	77	66.754	ENSANAG00000036184	SCAF8	82	67.104	Aotus_nancymaae
ENSCVAG00000000925	SCAF8	99	74.484	ENSACLG00000018828	SCAF8	96	74.189	Astatotilapia_calliptera
ENSCVAG00000000925	SCAF8	77	66.405	ENSBTAG00000031917	SCAF8	89	67.059	Bos_taurus
ENSCVAG00000000925	SCAF8	77	66.535	ENSCJAG00000012631	SCAF8	77	67.060	Callithrix_jacchus
ENSCVAG00000000925	SCAF8	77	66.841	ENSCAFG00000000570	SCAF8	88	67.366	Canis_familiaris
ENSCVAG00000000925	SCAF8	77	66.841	ENSCAFG00020015048	SCAF8	87	67.366	Canis_lupus_dingo
ENSCVAG00000000925	SCAF8	77	66.405	ENSCHIG00000025041	SCAF8	83	67.059	Capra_hircus
ENSCVAG00000000925	SCAF8	77	65.223	ENSTSYG00000010991	SCAF8	81	66.071	Carlito_syrichta
ENSCVAG00000000925	SCAF8	56	70.667	ENSCAPG00000003300	SCAF8	71	69.231	Cavia_aperea
ENSCVAG00000000925	SCAF8	77	57.424	ENSCPOG00000030311	-	54	53.693	Cavia_porcellus
ENSCVAG00000000925	SCAF8	77	58.018	ENSCPOG00000022216	-	84	58.540	Cavia_porcellus
ENSCVAG00000000925	SCAF8	77	66.230	ENSCCAG00000024952	SCAF8	82	66.754	Cebus_capucinus
ENSCVAG00000000925	SCAF8	77	66.710	ENSCATG00000035361	SCAF8	82	67.235	Cercocebus_atys
ENSCVAG00000000925	SCAF8	77	65.405	ENSCLAG00000004910	SCAF8	82	66.144	Chinchilla_lanigera
ENSCVAG00000000925	SCAF8	77	66.710	ENSCSAG00000013430	SCAF8	80	67.235	Chlorocebus_sabaeus
ENSCVAG00000000925	SCAF8	77	67.763	ENSCPBG00000016330	SCAF8	82	67.895	Chrysemys_picta_bellii
ENSCVAG00000000925	SCAF8	77	66.579	ENSCANG00000039499	SCAF8	82	67.104	Colobus_angolensis_palliatus
ENSCVAG00000000925	SCAF8	77	65.773	ENSCGRG00001020167	Scaf8	83	66.028	Cricetulus_griseus_chok1gshd
ENSCVAG00000000925	SCAF8	77	65.773	ENSCGRG00000004120	Scaf8	83	66.028	Cricetulus_griseus_crigri
ENSCVAG00000000925	SCAF8	99	73.813	ENSCSEG00000000043	-	96	74.201	Cynoglossus_semilaevis
ENSCVAG00000000925	SCAF8	76	64.322	ENSDNOG00000025271	SCAF8	87	64.322	Dasypus_novemcinctus
ENSCVAG00000000925	SCAF8	77	67.060	ENSDORG00000006391	Scaf8	83	67.454	Dipodomys_ordii
ENSCVAG00000000925	SCAF8	77	66.710	ENSEASG00005018879	SCAF8	82	67.147	Equus_asinus_asinus
ENSCVAG00000000925	SCAF8	77	66.710	ENSECAG00000005540	SCAF8	82	67.366	Equus_caballus
ENSCVAG00000000925	SCAF8	75	67.996	ENSELUG00000002779	SCAF8	98	57.411	Esox_lucius
ENSCVAG00000000925	SCAF8	77	68.170	ENSFCAG00000023424	SCAF8	82	67.628	Felis_catus
ENSCVAG00000000925	SCAF8	70	75.663	ENSFALG00000012433	SCAF8	86	67.543	Ficedula_albicollis
ENSCVAG00000000925	SCAF8	56	66.142	ENSFDAG00000010335	SCAF8	59	66.667	Fukomys_damarensis
ENSCVAG00000000925	SCAF8	99	86.272	ENSFHEG00000008284	SCAF8	96	86.807	Fundulus_heteroclitus
ENSCVAG00000000925	SCAF8	64	74.858	ENSGMOG00000018812	SCAF8	79	75.085	Gadus_morhua
ENSCVAG00000000925	SCAF8	77	70.055	ENSGALG00000013635	SCAF8	86	69.726	Gallus_gallus
ENSCVAG00000000925	SCAF8	99	84.179	ENSGAFG00000018033	SCAF8	96	84.478	Gambusia_affinis
ENSCVAG00000000925	SCAF8	77	75.372	ENSGACG00000006909	SCAF8	95	75.304	Gasterosteus_aculeatus
ENSCVAG00000000925	SCAF8	77	66.579	ENSGGOG00000008645	SCAF8	82	67.104	Gorilla_gorilla
ENSCVAG00000000925	SCAF8	99	75.562	ENSHBUG00000019537	SCAF8	96	75.337	Haplochromis_burtoni
ENSCVAG00000000925	SCAF8	56	66.010	ENSHGLG00000003619	SCAF8	59	66.535	Heterocephalus_glaber_female
ENSCVAG00000000925	SCAF8	56	66.010	ENSHGLG00100004708	SCAF8	60	66.535	Heterocephalus_glaber_male
ENSCVAG00000000925	SCAF8	77	66.535	ENSSTOG00000026043	SCAF8	82	67.060	Ictidomys_tridecemlineatus
ENSCVAG00000000925	SCAF8	76	66.057	ENSJJAG00000020480	Scaf8	82	66.710	Jaculus_jaculus
ENSCVAG00000000925	SCAF8	99	79.777	ENSKMAG00000012767	SCAF8	96	79.688	Kryptolebias_marmoratus
ENSCVAG00000000925	SCAF8	87	88.235	ENSLBEG00000012484	-	91	89.324	Labrus_bergylta
ENSCVAG00000000925	SCAF8	77	62.603	ENSLOCG00000016856	SCAF8	88	63.383	Lepisosteus_oculatus
ENSCVAG00000000925	SCAF8	68	74.359	ENSLAFG00000000022	SCAF8	82	67.320	Loxodonta_africana
ENSCVAG00000000925	SCAF8	77	66.710	ENSMFAG00000032738	SCAF8	83	67.192	Macaca_fascicularis
ENSCVAG00000000925	SCAF8	77	66.710	ENSMMUG00000015163	SCAF8	82	67.235	Macaca_mulatta
ENSCVAG00000000925	SCAF8	77	66.710	ENSMNEG00000043466	SCAF8	82	67.235	Macaca_nemestrina
ENSCVAG00000000925	SCAF8	77	66.841	ENSMLEG00000034845	SCAF8	82	67.366	Mandrillus_leucophaeus
ENSCVAG00000000925	SCAF8	99	73.564	ENSMAMG00000009457	SCAF8	99	74.191	Mastacembelus_armatus
ENSCVAG00000000925	SCAF8	99	74.410	ENSMZEG00005005698	SCAF8	96	74.115	Maylandia_zebra
ENSCVAG00000000925	SCAF8	77	67.366	ENSMGAG00000012762	SCAF8	89	67.235	Meleagris_gallopavo
ENSCVAG00000000925	SCAF8	77	65.900	ENSMAUG00000009513	Scaf8	83	66.156	Mesocricetus_auratus
ENSCVAG00000000925	SCAF8	77	66.667	ENSMICG00000028965	SCAF8	82	67.192	Microcebus_murinus
ENSCVAG00000000925	SCAF8	74	69.553	ENSMOCG00000014950	Scaf8	83	65.645	Microtus_ochrogaster
ENSCVAG00000000925	SCAF8	99	72.673	ENSMMOG00000002216	SCAF8	99	71.701	Mola_mola
ENSCVAG00000000925	SCAF8	77	67.979	ENSMODG00000008301	SCAF8	87	68.241	Monodelphis_domestica
ENSCVAG00000000925	SCAF8	99	75.444	ENSMALG00000011584	SCAF8	96	75.702	Monopterus_albus
ENSCVAG00000000925	SCAF8	77	65.838	MGP_CAROLIEiJ_G0021016	Scaf8	89	66.361	Mus_caroli
ENSCVAG00000000925	SCAF8	77	65.707	ENSMUSG00000046201	Scaf8	89	66.230	Mus_musculus
ENSCVAG00000000925	SCAF8	77	66.536	MGP_PahariEiJ_G0023334	Scaf8	89	66.885	Mus_pahari
ENSCVAG00000000925	SCAF8	77	66.448	ENSMPUG00000001974	SCAF8	81	66.972	Mustela_putorius_furo
ENSCVAG00000000925	SCAF8	77	66.055	ENSMLUG00000029190	SCAF8	87	66.929	Myotis_lucifugus
ENSCVAG00000000925	SCAF8	55	66.060	ENSNGAG00000012332	Scaf8	83	66.279	Nannospalax_galili
ENSCVAG00000000925	SCAF8	77	77.382	ENSNBRG00000009067	SCAF8	89	77.326	Neolamprologus_brichardi
ENSCVAG00000000925	SCAF8	77	66.710	ENSNLEG00000015509	SCAF8	81	67.235	Nomascus_leucogenys
ENSCVAG00000000925	SCAF8	55	90.741	ENSOPRG00000018413	-	67	90.741	Ochotona_princeps
ENSCVAG00000000925	SCAF8	77	66.186	ENSODEG00000007296	SCAF8	87	66.710	Octodon_degus
ENSCVAG00000000925	SCAF8	76	80.989	ENSONIG00000008119	SCAF8	89	79.063	Oreochromis_niloticus
ENSCVAG00000000925	SCAF8	77	66.841	ENSOCUG00000026063	SCAF8	82	67.366	Oryctolagus_cuniculus
ENSCVAG00000000925	SCAF8	99	74.870	ENSORLG00000017358	SCAF8	96	74.870	Oryzias_latipes
ENSCVAG00000000925	SCAF8	99	74.963	ENSORLG00020002214	SCAF8	96	74.963	Oryzias_latipes_hni
ENSCVAG00000000925	SCAF8	99	74.294	ENSORLG00015015779	SCAF8	96	75.111	Oryzias_latipes_hsok
ENSCVAG00000000925	SCAF8	99	75.653	ENSOMEG00000015471	SCAF8	96	76.102	Oryzias_melastigma
ENSCVAG00000000925	SCAF8	77	66.448	ENSOGAG00000034223	SCAF8	77	66.972	Otolemur_garnettii
ENSCVAG00000000925	SCAF8	77	66.536	ENSOARG00000004159	SCAF8	83	67.190	Ovis_aries
ENSCVAG00000000925	SCAF8	77	66.710	ENSPPAG00000039826	SCAF8	82	67.104	Pan_paniscus
ENSCVAG00000000925	SCAF8	77	63.758	ENSPPRG00000023175	SCAF8	81	67.759	Panthera_pardus
ENSCVAG00000000925	SCAF8	77	63.758	ENSPTIG00000014836	SCAF8	82	67.759	Panthera_tigris_altaica
ENSCVAG00000000925	SCAF8	77	66.841	ENSPTRG00000018727	SCAF8	82	67.366	Pan_troglodytes
ENSCVAG00000000925	SCAF8	77	66.710	ENSPANG00000017489	SCAF8	83	66.929	Papio_anubis
ENSCVAG00000000925	SCAF8	77	68.203	ENSPKIG00000021212	SCAF8	88	68.261	Paramormyrops_kingsleyae
ENSCVAG00000000925	SCAF8	63	73.540	ENSPSIG00000008614	SCAF8	70	65.067	Pelodiscus_sinensis
ENSCVAG00000000925	SCAF8	77	63.088	ENSPEMG00000010531	Scaf8	86	63.329	Peromyscus_maniculatus_bairdii
ENSCVAG00000000925	SCAF8	77	68.241	ENSPCIG00000001141	SCAF8	87	68.373	Phascolarctos_cinereus
ENSCVAG00000000925	SCAF8	55	52.096	ENSPFOG00000003261	scaf4b	72	53.020	Poecilia_formosa
ENSCVAG00000000925	SCAF8	99	84.914	ENSPFOG00000004176	SCAF8	96	85.138	Poecilia_formosa
ENSCVAG00000000925	SCAF8	99	84.839	ENSPLAG00000021432	SCAF8	96	85.063	Poecilia_latipinna
ENSCVAG00000000925	SCAF8	99	85.138	ENSPMEG00000007591	SCAF8	93	88.394	Poecilia_mexicana
ENSCVAG00000000925	SCAF8	99	85.063	ENSPREG00000000652	SCAF8	96	85.213	Poecilia_reticulata
ENSCVAG00000000925	SCAF8	77	66.754	ENSPPYG00000017121	SCAF8	81	67.147	Pongo_abelii
ENSCVAG00000000925	SCAF8	63	78.142	ENSPCAG00000013044	SCAF8	70	78.689	Procavia_capensis
ENSCVAG00000000925	SCAF8	77	64.589	ENSPCOG00000002067	SCAF8	84	65.087	Propithecus_coquereli
ENSCVAG00000000925	SCAF8	77	66.579	ENSPVAG00000005582	SCAF8	83	66.975	Pteropus_vampyrus
ENSCVAG00000000925	SCAF8	99	74.484	ENSPNYG00000007277	SCAF8	96	74.189	Pundamilia_nyererei
ENSCVAG00000000925	SCAF8	80	68.064	ENSPNAG00000024740	SCAF8	82	68.592	Pygocentrus_nattereri
ENSCVAG00000000925	SCAF8	77	66.319	ENSRNOG00000016919	Scaf8	89	66.841	Rattus_norvegicus
ENSCVAG00000000925	SCAF8	77	66.579	ENSRBIG00000035769	SCAF8	82	67.104	Rhinopithecus_bieti
ENSCVAG00000000925	SCAF8	77	66.579	ENSRROG00000013580	SCAF8	82	67.104	Rhinopithecus_roxellana
ENSCVAG00000000925	SCAF8	77	66.579	ENSSBOG00000027023	SCAF8	88	67.104	Saimiri_boliviensis_boliviensis
ENSCVAG00000000925	SCAF8	77	67.497	ENSSHAG00000009915	SCAF8	82	68.021	Sarcophilus_harrisii
ENSCVAG00000000925	SCAF8	76	62.078	ENSSFOG00015009481	SCAF8	56	54.735	Scleropages_formosus
ENSCVAG00000000925	SCAF8	99	72.466	ENSSMAG00000008275	SCAF8	97	73.094	Scophthalmus_maximus
ENSCVAG00000000925	SCAF8	77	70.629	ENSSPUG00000015219	SCAF8	82	70.909	Sphenodon_punctatus
ENSCVAG00000000925	SCAF8	68	69.907	ENSSPAG00000019433	SCAF8	69	69.804	Stegastes_partitus
ENSCVAG00000000925	SCAF8	77	63.196	ENSSSCG00000004070	SCAF8	87	64.000	Sus_scrofa
ENSCVAG00000000925	SCAF8	77	67.503	ENSTGUG00000011151	SCAF8	89	68.032	Taeniopygia_guttata
ENSCVAG00000000925	SCAF8	99	68.773	ENSTRUG00000009243	SCAF8	96	69.588	Takifugu_rubripes
ENSCVAG00000000925	SCAF8	77	75.143	ENSTNIG00000016885	SCAF8	95	75.024	Tetraodon_nigroviridis
ENSCVAG00000000925	SCAF8	77	66.841	ENSTTRG00000014538	SCAF8	87	67.235	Tursiops_truncatus
ENSCVAG00000000925	SCAF8	77	67.016	ENSUAMG00000024736	SCAF8	82	67.539	Ursus_americanus
ENSCVAG00000000925	SCAF8	77	67.016	ENSUMAG00000013404	SCAF8	83	67.539	Ursus_maritimus
ENSCVAG00000000925	SCAF8	77	66.886	ENSVVUG00000007532	SCAF8	91	67.411	Vulpes_vulpes
ENSCVAG00000000925	SCAF8	70	69.829	ENSXETG00000013132	scaf8	76	66.373	Xenopus_tropicalis
ENSCVAG00000000925	SCAF8	99	85.116	ENSXMAG00000019192	SCAF8	96	85.116	Xiphophorus_maculatus