EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000000944 (Gene tree)
Gene ID: 107097910
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4844 bases
Position: chrKL653232.1:346785-351628
Accession: 107097910
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000004928	zf-C2H2	PF00096.26	3.8e-12	1	2
ENSCVAP00000004928	zf-C2H2	PF00096.26	3.8e-12	2	2
ENSCVAP00000004928	zf-met	PF12874.7	7.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000007537	-	2061	XM_015395257	ENSCVAP00000004928	385 (aa)	XP_015250743	UPI00074275A5

Gene Model

Click here to download ENSCVAG00000000944's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000000944's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000000944	-	69	42.105	ENSCVAG00000013692	prdm5	86	42.105
ENSCVAG00000000944	-	100	77.949	ENSCVAG00000017166	prdm12b	100	78.462
ENSCVAG00000000944	-	58	33.750	ENSCVAG00000019089	-	57	33.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000000944	-	90	77.493	ENSG00000130711	PRDM12	99	72.308	Homo_sapiens
ENSCVAG00000000944	-	100	72.351	ENSAPOG00000018234	-	100	72.093	Acanthochromis_polyacanthus
ENSCVAG00000000944	-	100	80.612	ENSAPOG00000016051	prdm12b	100	80.612	Acanthochromis_polyacanthus
ENSCVAG00000000944	-	89	76.590	ENSAMEG00000016234	PRDM12	99	76.590	Ailuropoda_melanoleuca
ENSCVAG00000000944	-	100	80.256	ENSACIG00000019578	prdm12b	100	80.000	Amphilophus_citrinellus
ENSCVAG00000000944	-	100	84.422	ENSACIG00000005193	-	100	84.673	Amphilophus_citrinellus
ENSCVAG00000000944	-	100	79.744	ENSAOCG00000015040	prdm12b	100	79.744	Amphiprion_ocellaris
ENSCVAG00000000944	-	100	79.849	ENSAPEG00000022849	-	99	78.338	Amphiprion_percula
ENSCVAG00000000944	-	100	79.231	ENSAPEG00000015092	prdm12b	100	79.231	Amphiprion_percula
ENSCVAG00000000944	-	100	87.056	ENSATEG00000014595	-	100	86.957	Anabas_testudineus
ENSCVAG00000000944	-	90	77.493	ENSANAG00000020616	PRDM12	96	77.493	Aotus_nancymaae
ENSCVAG00000000944	-	100	82.630	ENSACLG00000007631	-	100	82.382	Astatotilapia_calliptera
ENSCVAG00000000944	-	100	74.872	ENSACLG00000011876	prdm12b	100	74.103	Astatotilapia_calliptera
ENSCVAG00000000944	-	100	80.000	ENSAMXG00000033665	prdm12b	100	80.000	Astyanax_mexicanus
ENSCVAG00000000944	-	100	76.413	ENSAMXG00000008540	PRDM12	100	75.182	Astyanax_mexicanus
ENSCVAG00000000944	-	90	77.778	ENSBTAG00000023797	PRDM12	99	72.821	Bos_taurus
ENSCVAG00000000944	-	90	77.493	ENSCJAG00000020540	PRDM12	99	70.854	Callithrix_jacchus
ENSCVAG00000000944	-	80	79.032	ENSCAFG00000023076	PRDM12	99	73.066	Canis_familiaris
ENSCVAG00000000944	-	90	77.778	ENSCAFG00020024046	PRDM12	99	72.564	Canis_lupus_dingo
ENSCVAG00000000944	-	90	77.778	ENSCHIG00000025005	PRDM12	99	72.308	Capra_hircus
ENSCVAG00000000944	-	93	73.077	ENSCPOG00000005901	PRDM12	95	77.015	Cavia_porcellus
ENSCVAG00000000944	-	90	77.493	ENSCCAG00000037485	PRDM12	99	72.051	Cebus_capucinus
ENSCVAG00000000944	-	90	77.493	ENSCATG00000020327	PRDM12	99	72.051	Cercocebus_atys
ENSCVAG00000000944	-	91	76.554	ENSCLAG00000005499	PRDM12	90	76.923	Chinchilla_lanigera
ENSCVAG00000000944	-	90	77.493	ENSCSAG00000014756	PRDM12	99	72.308	Chlorocebus_sabaeus
ENSCVAG00000000944	-	100	75.128	ENSCPBG00000022628	PRDM12	99	74.103	Chrysemys_picta_bellii
ENSCVAG00000000944	-	90	77.778	ENSCGRG00001015005	Prdm12	99	72.564	Cricetulus_griseus_chok1gshd
ENSCVAG00000000944	-	100	78.974	ENSDARG00000007430	prdm12b	100	76.923	Danio_rerio
ENSCVAG00000000944	-	90	77.273	ENSDNOG00000042302	PRDM12	99	72.634	Dasypus_novemcinctus
ENSCVAG00000000944	-	86	66.569	ENSEBUG00000016780	prdm12b	74	67.059	Eptatretus_burgeri
ENSCVAG00000000944	-	91	77.401	ENSEASG00005008472	PRDM12	99	72.308	Equus_asinus_asinus
ENSCVAG00000000944	-	91	77.401	ENSECAG00000005933	PRDM12	99	72.308	Equus_caballus
ENSCVAG00000000944	-	100	76.154	ENSELUG00000013674	PRDM12	100	76.215	Esox_lucius
ENSCVAG00000000944	-	100	78.718	ENSELUG00000009905	prdm12b	100	76.864	Esox_lucius
ENSCVAG00000000944	-	90	77.778	ENSFCAG00000043086	PRDM12	99	72.308	Felis_catus
ENSCVAG00000000944	-	100	76.154	ENSFALG00000001445	PRDM12	89	75.385	Ficedula_albicollis
ENSCVAG00000000944	-	100	77.692	ENSFHEG00000003944	prdm12b	100	77.949	Fundulus_heteroclitus
ENSCVAG00000000944	-	100	83.623	ENSFHEG00000007746	-	100	83.623	Fundulus_heteroclitus
ENSCVAG00000000944	-	100	75.385	ENSGMOG00000011797	prdm12b	100	75.385	Gadus_morhua
ENSCVAG00000000944	-	100	76.154	ENSGALG00000003895	PRDM12	99	75.385	Gallus_gallus
ENSCVAG00000000944	-	100	78.462	ENSGAFG00000010827	prdm12b	99	78.462	Gambusia_affinis
ENSCVAG00000000944	-	100	77.041	ENSGACG00000016713	prdm12b	99	76.020	Gasterosteus_aculeatus
ENSCVAG00000000944	-	100	75.897	ENSGAGG00000014083	PRDM12	99	74.872	Gopherus_agassizii
ENSCVAG00000000944	-	90	77.208	ENSGGOG00000010568	PRDM12	99	72.051	Gorilla_gorilla
ENSCVAG00000000944	-	100	82.630	ENSHBUG00000022537	-	93	82.382	Haplochromis_burtoni
ENSCVAG00000000944	-	100	78.626	ENSHBUG00000022878	prdm12b	100	77.949	Haplochromis_burtoni
ENSCVAG00000000944	-	91	77.401	ENSHGLG00000013939	PRDM12	99	72.564	Heterocephalus_glaber_female
ENSCVAG00000000944	-	100	73.282	ENSHCOG00000021167	-	100	73.282	Hippocampus_comes
ENSCVAG00000000944	-	89	80.802	ENSHCOG00000003663	prdm12b	100	74.436	Hippocampus_comes
ENSCVAG00000000944	-	100	80.000	ENSIPUG00000017053	prdm12b	100	78.974	Ictalurus_punctatus
ENSCVAG00000000944	-	100	71.867	ENSIPUG00000019544	PRDM12	100	71.867	Ictalurus_punctatus
ENSCVAG00000000944	-	90	77.778	ENSSTOG00000005986	PRDM12	86	77.778	Ictidomys_tridecemlineatus
ENSCVAG00000000944	-	90	77.778	ENSJJAG00000005424	Prdm12	99	77.778	Jaculus_jaculus
ENSCVAG00000000944	-	96	81.843	ENSKMAG00000021205	-	94	81.671	Kryptolebias_marmoratus
ENSCVAG00000000944	-	100	73.902	ENSKMAG00000016921	prdm12b	100	73.902	Kryptolebias_marmoratus
ENSCVAG00000000944	-	100	78.571	ENSLBEG00000017769	prdm12b	100	78.316	Labrus_bergylta
ENSCVAG00000000944	-	100	84.367	ENSLBEG00000007776	-	100	85.250	Labrus_bergylta
ENSCVAG00000000944	-	100	76.410	ENSLACG00000017560	PRDM12	99	75.641	Latimeria_chalumnae
ENSCVAG00000000944	-	100	79.592	ENSLOCG00000005429	prdm12b	100	79.847	Lepisosteus_oculatus
ENSCVAG00000000944	-	90	76.404	ENSLAFG00000006979	PRDM12	90	76.685	Loxodonta_africana
ENSCVAG00000000944	-	90	77.493	ENSMFAG00000040322	PRDM12	89	77.493	Macaca_fascicularis
ENSCVAG00000000944	-	90	77.493	ENSMNEG00000037234	PRDM12	99	72.051	Macaca_nemestrina
ENSCVAG00000000944	-	100	79.064	ENSMAMG00000018988	-	100	79.064	Mastacembelus_armatus
ENSCVAG00000000944	-	100	79.337	ENSMAMG00000013212	prdm12b	100	79.337	Mastacembelus_armatus
ENSCVAG00000000944	-	100	82.222	ENSMZEG00005000415	PRDM12	100	82.716	Maylandia_zebra
ENSCVAG00000000944	-	98	75.781	ENSMGAG00000005438	PRDM12	98	75.000	Meleagris_gallopavo
ENSCVAG00000000944	-	100	72.704	ENSMAUG00000013040	Prdm12	99	72.564	Mesocricetus_auratus
ENSCVAG00000000944	-	94	75.000	ENSMICG00000015480	PRDM12	91	77.778	Microcebus_murinus
ENSCVAG00000000944	-	98	73.698	ENSMOCG00000021026	Prdm12	90	78.063	Microtus_ochrogaster
ENSCVAG00000000944	-	100	74.615	ENSMODG00000012108	PRDM12	99	73.846	Monodelphis_domestica
ENSCVAG00000000944	-	85	76.524	ENSMALG00000021901	prdm12b	96	75.000	Monopterus_albus
ENSCVAG00000000944	-	90	77.778	MGP_CAROLIEiJ_G0023414	Prdm12	99	72.821	Mus_caroli
ENSCVAG00000000944	-	90	77.778	ENSMUSG00000079466	Prdm12	99	72.821	Mus_musculus
ENSCVAG00000000944	-	90	77.778	MGP_PahariEiJ_G0024871	Prdm12	99	72.821	Mus_pahari
ENSCVAG00000000944	-	90	77.778	MGP_SPRETEiJ_G0024331	Prdm12	99	72.821	Mus_spretus
ENSCVAG00000000944	-	89	78.386	ENSNGAG00000018480	Prdm12	99	72.564	Nannospalax_galili
ENSCVAG00000000944	-	100	79.744	ENSNBRG00000006727	prdm12b	100	79.231	Neolamprologus_brichardi
ENSCVAG00000000944	-	100	75.635	ENSNBRG00000024312	-	100	76.650	Neolamprologus_brichardi
ENSCVAG00000000944	-	100	66.923	ENSMEUG00000003828	PRDM12	99	66.154	Notamacropus_eugenii
ENSCVAG00000000944	-	90	77.493	ENSOPRG00000008680	PRDM12	99	77.493	Ochotona_princeps
ENSCVAG00000000944	-	90	77.493	ENSODEG00000016282	PRDM12	62	77.778	Octodon_degus
ENSCVAG00000000944	-	64	73.387	ENSOANG00000001043	PRDM12	100	72.177	Ornithorhynchus_anatinus
ENSCVAG00000000944	-	83	78.816	ENSOCUG00000008241	PRDM12	96	78.816	Oryctolagus_cuniculus
ENSCVAG00000000944	-	100	87.121	ENSORLG00000017558	-	100	84.848	Oryzias_latipes
ENSCVAG00000000944	-	100	78.974	ENSORLG00000007114	prdm12b	99	77.436	Oryzias_latipes
ENSCVAG00000000944	-	100	78.462	ENSORLG00020019565	prdm12b	99	78.462	Oryzias_latipes_hni
ENSCVAG00000000944	-	100	87.154	ENSORLG00020013167	-	100	85.894	Oryzias_latipes_hni
ENSCVAG00000000944	-	100	87.121	ENSORLG00015003435	-	100	84.848	Oryzias_latipes_hsok
ENSCVAG00000000944	-	100	77.692	ENSORLG00015007621	prdm12b	99	77.179	Oryzias_latipes_hsok
ENSCVAG00000000944	-	100	78.005	ENSOMEG00000004134	prdm12b	99	78.261	Oryzias_melastigma
ENSCVAG00000000944	-	100	87.186	ENSOMEG00000007762	-	100	85.930	Oryzias_melastigma
ENSCVAG00000000944	-	90	77.778	ENSOGAG00000007557	PRDM12	98	77.778	Otolemur_garnettii
ENSCVAG00000000944	-	79	75.081	ENSPPAG00000031506	-	99	73.968	Pan_paniscus
ENSCVAG00000000944	-	100	66.076	ENSPPRG00000023024	PRDM12	84	70.739	Panthera_pardus
ENSCVAG00000000944	-	90	77.493	ENSPTRG00000021475	PRDM12	99	72.308	Pan_troglodytes
ENSCVAG00000000944	-	90	77.493	ENSPTRG00000043324	-	99	72.308	Pan_troglodytes
ENSCVAG00000000944	-	90	77.493	ENSPANG00000025967	PRDM12	99	72.051	Papio_anubis
ENSCVAG00000000944	-	100	81.282	ENSPKIG00000007228	prdm12b	100	80.256	Paramormyrops_kingsleyae
ENSCVAG00000000944	-	89	77.233	ENSPKIG00000004305	PRDM12	94	75.216	Paramormyrops_kingsleyae
ENSCVAG00000000944	-	100	75.128	ENSPSIG00000006739	PRDM12	99	74.615	Pelodiscus_sinensis
ENSCVAG00000000944	-	100	76.238	ENSPMGG00000002356	-	100	75.000	Periophthalmus_magnuspinnatus
ENSCVAG00000000944	-	100	77.041	ENSPMGG00000008867	prdm12b	99	76.410	Periophthalmus_magnuspinnatus
ENSCVAG00000000944	-	97	74.603	ENSPEMG00000009969	Prdm12	90	77.778	Peromyscus_maniculatus_bairdii
ENSCVAG00000000944	-	100	74.872	ENSPCIG00000024119	PRDM12	99	74.103	Phascolarctos_cinereus
ENSCVAG00000000944	-	100	77.806	ENSPFOG00000019841	prdm12b	100	77.806	Poecilia_formosa
ENSCVAG00000000944	-	100	77.863	ENSPLAG00000016626	prdm12b	99	78.117	Poecilia_latipinna
ENSCVAG00000000944	-	96	79.515	ENSPMEG00000016698	prdm12b	97	79.515	Poecilia_mexicana
ENSCVAG00000000944	-	100	77.411	ENSPREG00000015073	prdm12b	99	77.411	Poecilia_reticulata
ENSCVAG00000000944	-	96	79.787	ENSPREG00000003211	-	94	79.787	Poecilia_reticulata
ENSCVAG00000000944	-	89	78.098	ENSPPYG00000019694	PRDM12	92	78.098	Pongo_abelii
ENSCVAG00000000944	-	90	77.778	ENSPCOG00000022255	PRDM12	99	72.821	Propithecus_coquereli
ENSCVAG00000000944	-	90	77.778	ENSPVAG00000001511	PRDM12	99	72.564	Pteropus_vampyrus
ENSCVAG00000000944	-	100	82.469	ENSPNYG00000013589	-	100	82.963	Pundamilia_nyererei
ENSCVAG00000000944	-	100	78.974	ENSPNYG00000009607	prdm12b	100	78.205	Pundamilia_nyererei
ENSCVAG00000000944	-	100	80.000	ENSPNAG00000024532	prdm12b	100	78.974	Pygocentrus_nattereri
ENSCVAG00000000944	-	100	73.214	ENSPNAG00000013396	PRDM12	100	73.077	Pygocentrus_nattereri
ENSCVAG00000000944	-	90	77.778	ENSRNOG00000009218	Prdm12	99	72.821	Rattus_norvegicus
ENSCVAG00000000944	-	87	77.581	ENSRBIG00000042712	PRDM12	88	76.968	Rhinopithecus_bieti
ENSCVAG00000000944	-	88	77.843	ENSRROG00000043554	PRDM12	99	77.843	Rhinopithecus_roxellana
ENSCVAG00000000944	-	100	74.425	ENSSHAG00000015972	PRDM12	99	73.657	Sarcophilus_harrisii
ENSCVAG00000000944	-	100	77.975	ENSSMAG00000003754	prdm12b	100	78.304	Scophthalmus_maximus
ENSCVAG00000000944	-	100	80.203	ENSSDUG00000023498	prdm12b	100	78.680	Seriola_dumerili
ENSCVAG00000000944	-	100	87.023	ENSSDUG00000019071	-	100	86.189	Seriola_dumerili
ENSCVAG00000000944	-	100	79.540	ENSSLDG00000013562	-	100	79.540	Seriola_lalandi_dorsalis
ENSCVAG00000000944	-	100	80.102	ENSSLDG00000009557	prdm12b	100	78.571	Seriola_lalandi_dorsalis
ENSCVAG00000000944	-	100	75.897	ENSSPUG00000013424	PRDM12	99	74.615	Sphenodon_punctatus
ENSCVAG00000000944	-	100	80.000	ENSSPAG00000018824	prdm12b	100	79.744	Stegastes_partitus
ENSCVAG00000000944	-	100	80.000	ENSSPAG00000022420	-	100	77.722	Stegastes_partitus
ENSCVAG00000000944	-	90	77.778	ENSSSCG00000005703	PRDM12	99	72.564	Sus_scrofa
ENSCVAG00000000944	-	100	81.330	ENSTRUG00000013239	-	100	81.074	Takifugu_rubripes
ENSCVAG00000000944	-	100	77.296	ENSTRUG00000018659	prdm12b	100	77.296	Takifugu_rubripes
ENSCVAG00000000944	-	100	75.255	ENSTNIG00000009020	prdm12b	99	75.510	Tetraodon_nigroviridis
ENSCVAG00000000944	-	100	76.020	ENSTNIG00000005859	-	99	75.765	Tetraodon_nigroviridis
ENSCVAG00000000944	-	90	77.778	ENSUAMG00000009653	PRDM12	91	77.778	Ursus_americanus
ENSCVAG00000000944	-	90	77.778	ENSVVUG00000027662	PRDM12	78	77.778	Vulpes_vulpes
ENSCVAG00000000944	-	100	77.949	ENSXCOG00000002836	prdm12b	99	78.462	Xiphophorus_couchianus
ENSCVAG00000000944	-	100	78.718	ENSXMAG00000005537	prdm12b	100	79.231	Xiphophorus_maculatus
ENSCVAG00000000944	-	100	90.932	ENSXMAG00000028012	-	100	89.169	Xiphophorus_maculatus